Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2488:A2487
Extra
PDB:
ATOM 1 O3' A A2487 108.639 -52.352 64.077 1.00 91.90 O
ATOM 2 P C A2488 109.506 -51.028 64.281 1.00 72.32 P
ATOM 3 OP1 C A2488 110.448 -51.288 65.390 1.00 97.42 O
ATOM 4 OP2 C A2488 108.577 -49.899 64.387 1.00 73.63 O
ATOM 5 O5' C A2488 110.293 -50.938 62.931 1.00 95.18 O
ATOM 6 C5' C A2488 110.500 -49.696 62.319 1.00101.38 C
ATOM 7 C4' C A2488 110.107 -49.735 60.879 1.00 93.71 C
ATOM 8 O4' C A2488 108.724 -50.136 60.766 1.00 78.24 O
ATOM 9 C3' C A2488 110.190 -48.409 60.155 1.00 88.29 C
ATOM 10 O3' C A2488 111.488 -48.147 59.666 1.00 99.66 O
ATOM 11 C2' C A2488 109.141 -48.545 59.060 1.00 78.92 C
ATOM 12 O2' C A2488 109.646 -49.250 57.942 1.00 86.13 O
ATOM 13 C1' C A2488 108.090 -49.411 59.744 1.00 79.66 C
ATOM 14 N1 C A2488 107.046 -48.596 60.355 1.00 77.25 N
ATOM 15 C2 C A2488 106.558 -47.480 59.671 1.00 78.60 C
ATOM 16 O2 C A2488 106.991 -47.197 58.545 1.00 80.01 O
ATOM 17 N3 C A2488 105.612 -46.726 60.249 1.00 77.18 N
ATOM 18 C4 C A2488 105.163 -47.054 61.452 1.00 81.15 C
ATOM 19 N4 C A2488 104.220 -46.287 61.995 1.00 93.99 N
ATOM 20 C5 C A2488 105.643 -48.183 62.162 1.00 78.94 C
ATOM 21 C6 C A2488 106.583 -48.930 61.587 1.00 76.64 C
ATOM 22 P G A2489 112.656 -47.689 60.656 1.00120.32 P
ATOM 23 OP1 G A2489 113.937 -48.170 60.088 1.00156.59 O
ATOM 24 OP2 G A2489 112.283 -48.101 62.015 1.00142.08 O
ATOM 25 O5' G A2489 112.565 -46.140 60.541 1.00 68.48 O
TER
ATOM 1 O3' U B2486 103.378 -49.723 67.431 1.00 70.21 O
ATOM 2 P A B2487 104.772 -49.382 66.726 1.00 77.97 P
ATOM 3 OP1 A B2487 105.744 -49.065 67.799 1.00160.48 O
ATOM 4 OP2 A B2487 104.500 -48.361 65.694 1.00146.47 O
ATOM 5 O5' A B2487 105.163 -50.761 66.041 1.00 90.56 O
ATOM 6 C5' A B2487 106.032 -50.774 64.926 1.00 99.20 C
ATOM 7 C4' A B2487 106.249 -52.156 64.381 1.00 87.71 C
ATOM 8 O4' A B2487 105.106 -52.567 63.592 1.00 92.65 O
ATOM 9 C3' A B2487 107.406 -52.278 63.418 1.00 88.54 C
ATOM 10 O3' A B2487 108.639 -52.352 64.077 1.00 91.90 O
ATOM 11 C2' A B2487 107.053 -53.521 62.624 1.00 97.71 C
ATOM 12 O2' A B2487 107.334 -54.691 63.374 1.00104.31 O
ATOM 13 C1' A B2487 105.538 -53.372 62.511 1.00103.73 C
ATOM 14 N9 A B2487 105.141 -52.729 61.236 1.00110.73 N
ATOM 15 C8 A B2487 105.497 -53.166 59.974 1.00111.77 C
ATOM 16 N7 A B2487 105.026 -52.442 58.984 1.00102.99 N
ATOM 17 C5 A B2487 104.315 -51.460 59.640 1.00 94.20 C
ATOM 18 C6 A B2487 103.596 -50.393 59.133 1.00 88.42 C
ATOM 19 N6 A B2487 103.481 -50.156 57.836 1.00 82.55 N
ATOM 20 N1 A B2487 103.009 -49.589 60.028 1.00 96.90 N
ATOM 21 C2 A B2487 103.143 -49.863 61.333 1.00 92.18 C
ATOM 22 N3 A B2487 103.794 -50.837 61.938 1.00 81.28 N
ATOM 23 C4 A B2487 104.373 -51.610 61.020 1.00 94.83 C
ATOM 24 P C B2488 109.506 -51.028 64.281 1.00 72.32 P
ATOM 25 OP1 C B2488 110.448 -51.288 65.390 1.00 97.42 O
ATOM 26 OP2 C B2488 108.577 -49.899 64.387 1.00 73.63 O
ATOM 27 O5' C B2488 110.293 -50.938 62.931 1.00 95.18 O
TER
ATOM 2 P C A2488 109.506 -51.028 64.281 1.00 72.32 P
ATOM 3 OP1 C A2488 110.448 -51.288 65.390 1.00 97.42 O
ATOM 4 OP2 C A2488 108.577 -49.899 64.387 1.00 73.63 O
ATOM 5 O5' C A2488 110.293 -50.938 62.931 1.00 95.18 O
ATOM 6 C5' C A2488 110.500 -49.696 62.319 1.00101.38 C
ATOM 7 C4' C A2488 110.107 -49.735 60.879 1.00 93.71 C
ATOM 8 O4' C A2488 108.724 -50.136 60.766 1.00 78.24 O
ATOM 9 C3' C A2488 110.190 -48.409 60.155 1.00 88.29 C
ATOM 10 O3' C A2488 111.488 -48.147 59.666 1.00 99.66 O
ATOM 11 C2' C A2488 109.141 -48.545 59.060 1.00 78.92 C
ATOM 12 O2' C A2488 109.646 -49.250 57.942 1.00 86.13 O
ATOM 13 C1' C A2488 108.090 -49.411 59.744 1.00 79.66 C
ATOM 14 N1 C A2488 107.046 -48.596 60.355 1.00 77.25 N
ATOM 15 C2 C A2488 106.558 -47.480 59.671 1.00 78.60 C
ATOM 16 O2 C A2488 106.991 -47.197 58.545 1.00 80.01 O
ATOM 17 N3 C A2488 105.612 -46.726 60.249 1.00 77.18 N
ATOM 18 C4 C A2488 105.163 -47.054 61.452 1.00 81.15 C
ATOM 19 N4 C A2488 104.220 -46.287 61.995 1.00 93.99 N
ATOM 20 C5 C A2488 105.643 -48.183 62.162 1.00 78.94 C
ATOM 21 C6 C A2488 106.583 -48.930 61.587 1.00 76.64 C
ATOM 22 P G A2489 112.656 -47.689 60.656 1.00120.32 P
ATOM 23 OP1 G A2489 113.937 -48.170 60.088 1.00156.59 O
ATOM 24 OP2 G A2489 112.283 -48.101 62.015 1.00142.08 O
ATOM 25 O5' G A2489 112.565 -46.140 60.541 1.00 68.48 O
TER
ATOM 1 O3' U B2486 103.378 -49.723 67.431 1.00 70.21 O
ATOM 2 P A B2487 104.772 -49.382 66.726 1.00 77.97 P
ATOM 3 OP1 A B2487 105.744 -49.065 67.799 1.00160.48 O
ATOM 4 OP2 A B2487 104.500 -48.361 65.694 1.00146.47 O
ATOM 5 O5' A B2487 105.163 -50.761 66.041 1.00 90.56 O
ATOM 6 C5' A B2487 106.032 -50.774 64.926 1.00 99.20 C
ATOM 7 C4' A B2487 106.249 -52.156 64.381 1.00 87.71 C
ATOM 8 O4' A B2487 105.106 -52.567 63.592 1.00 92.65 O
ATOM 9 C3' A B2487 107.406 -52.278 63.418 1.00 88.54 C
ATOM 10 O3' A B2487 108.639 -52.352 64.077 1.00 91.90 O
ATOM 11 C2' A B2487 107.053 -53.521 62.624 1.00 97.71 C
ATOM 12 O2' A B2487 107.334 -54.691 63.374 1.00104.31 O
ATOM 13 C1' A B2487 105.538 -53.372 62.511 1.00103.73 C
ATOM 14 N9 A B2487 105.141 -52.729 61.236 1.00110.73 N
ATOM 15 C8 A B2487 105.497 -53.166 59.974 1.00111.77 C
ATOM 16 N7 A B2487 105.026 -52.442 58.984 1.00102.99 N
ATOM 17 C5 A B2487 104.315 -51.460 59.640 1.00 94.20 C
ATOM 18 C6 A B2487 103.596 -50.393 59.133 1.00 88.42 C
ATOM 19 N6 A B2487 103.481 -50.156 57.836 1.00 82.55 N
ATOM 20 N1 A B2487 103.009 -49.589 60.028 1.00 96.90 N
ATOM 21 C2 A B2487 103.143 -49.863 61.333 1.00 92.18 C
ATOM 22 N3 A B2487 103.794 -50.837 61.938 1.00 81.28 N
ATOM 23 C4 A B2487 104.373 -51.610 61.020 1.00 94.83 C
ATOM 24 P C B2488 109.506 -51.028 64.281 1.00 72.32 P
ATOM 25 OP1 C B2488 110.448 -51.288 65.390 1.00 97.42 O
ATOM 26 OP2 C B2488 108.577 -49.899 64.387 1.00 73.63 O
ATOM 27 O5' C B2488 110.293 -50.938 62.931 1.00 95.18 O
TER
Atoms:
C2: (106.558,-47.480,59.671)
OP1: (110.448,-51.288,65.390)
OP2: (108.577,-49.899,64.387)
C4: (105.163,-47.054,61.452)
O5': (110.293,-50.938,62.931)
C3': (110.190,-48.409,60.155)
C1': (108.090,-49.411,59.744)
O4': (108.724,-50.136,60.766)
C5': (110.500,-49.696,62.319)
P: (109.506,-51.028,64.281)
O2: (106.991,-47.197,58.545)
C4': (110.107,-49.735,60.879)
C2': (109.141,-48.545,59.060)
O2': (109.646,-49.250,57.942)
N1: (107.046,-48.596,60.355)
N3: (105.612,-46.726,60.249)
N4: (104.220,-46.287,61.995)
C6: (106.583,-48.930,61.587)
C5: (105.643,-48.183,62.162)
O3': (111.488,-48.147,59.666)
OP1: (110.448,-51.288,65.390)
OP2: (108.577,-49.899,64.387)
C4: (105.163,-47.054,61.452)
O5': (110.293,-50.938,62.931)
C3': (110.190,-48.409,60.155)
C1': (108.090,-49.411,59.744)
O4': (108.724,-50.136,60.766)
C5': (110.500,-49.696,62.319)
P: (109.506,-51.028,64.281)
O2: (106.991,-47.197,58.545)
C4': (110.107,-49.735,60.879)
C2': (109.141,-48.545,59.060)
O2': (109.646,-49.250,57.942)
N1: (107.046,-48.596,60.355)
N3: (105.612,-46.726,60.249)
N4: (104.220,-46.287,61.995)
C6: (106.583,-48.930,61.587)
C5: (105.643,-48.183,62.162)
O3': (111.488,-48.147,59.666)
OP1: (105.744,-49.065,67.799)
OP2: (104.500,-48.361,65.694)
C3': (107.406,-52.278,63.418)
C1': (105.538,-53.372,62.511)
C5': (106.032,-50.774,64.926)
O4': (105.106,-52.567,63.592)
C8: (105.497,-53.166,59.974)
O2': (107.334,-54.691,63.374)
C6: (103.596,-50.393,59.133)
C5: (104.315,-51.460,59.640)
C4: (104.373,-51.610,61.020)
P: (104.772,-49.382,66.726)
C4': (106.249,-52.156,64.381)
C2': (107.053,-53.521,62.624)
C2: (103.143,-49.863,61.333)
N1: (103.009,-49.589,60.028)
N3: (103.794,-50.837,61.938)
N6: (103.481,-50.156,57.836)
N7: (105.026,-52.442,58.984)
N9: (105.141,-52.729,61.236)
O5': (105.163,-50.761,66.041)
O3': (108.639,-52.352,64.077)
OP2: (104.500,-48.361,65.694)
C3': (107.406,-52.278,63.418)
C1': (105.538,-53.372,62.511)
C5': (106.032,-50.774,64.926)
O4': (105.106,-52.567,63.592)
C8: (105.497,-53.166,59.974)
O2': (107.334,-54.691,63.374)
C6: (103.596,-50.393,59.133)
C5: (104.315,-51.460,59.640)
C4: (104.373,-51.610,61.020)
P: (104.772,-49.382,66.726)
C4': (106.249,-52.156,64.381)
C2': (107.053,-53.521,62.624)
C2: (103.143,-49.863,61.333)
N1: (103.009,-49.589,60.028)
N3: (103.794,-50.837,61.938)
N6: (103.481,-50.156,57.836)
N7: (105.026,-52.442,58.984)
N9: (105.141,-52.729,61.236)
O5': (105.163,-50.761,66.041)
O3': (108.639,-52.352,64.077)
Image (generated by PyMOL):