ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0306:0307

Extra

PDB:
ATOM 1 O3' A A 305 8.715 141.231 40.555 1.00 45.41 O
ATOM 2 P U A 306 9.301 141.047 39.080 1.00 47.04 P
ATOM 3 OP1 U A 306 10.182 142.212 38.812 1.00 48.94 O
ATOM 4 OP2 U A 306 8.186 140.725 38.153 1.00 48.53 O
ATOM 5 O5' U A 306 10.238 139.767 39.225 1.00 48.52 O
ATOM 6 C5' U A 306 9.886 138.501 38.644 1.00 49.37 C
ATOM 7 C4' U A 306 10.506 137.371 39.443 1.00 50.94 C
ATOM 8 O4' U A 306 11.946 137.588 39.551 1.00 51.40 O
ATOM 9 C3' U A 306 9.998 137.230 40.877 1.00 51.59 C
ATOM 10 O3' U A 306 10.054 135.857 41.260 1.00 51.55 O
ATOM 11 C2' U A 306 11.032 138.024 41.665 1.00 53.07 C
ATOM 12 O2' U A 306 11.118 137.668 43.031 1.00 55.12 O
ATOM 13 C1' U A 306 12.313 137.658 40.918 1.00 52.37 C
ATOM 14 N1 U A 306 13.384 138.655 41.084 1.00 52.24 N
ATOM 15 C2 U A 306 14.609 138.216 41.560 1.00 52.58 C
ATOM 16 O2 U A 306 14.843 137.050 41.818 1.00 54.07 O
ATOM 17 N3 U A 306 15.553 139.199 41.726 1.00 52.61 N
ATOM 18 C4 U A 306 15.405 140.546 41.472 1.00 51.25 C
ATOM 19 O4 U A 306 16.338 141.313 41.716 1.00 49.87 O
ATOM 20 C5 U A 306 14.117 140.919 40.971 1.00 50.46 C
ATOM 21 C6 U A 306 13.176 139.985 40.796 1.00 50.91 C
ATOM 22 P A A 307 8.695 135.008 41.414 1.00 52.08 P
ATOM 23 OP1 A A 307 9.053 133.580 41.209 1.00 51.87 O
ATOM 24 OP2 A A 307 7.627 135.627 40.567 1.00 51.01 O
ATOM 25 O5' A A 307 8.298 135.197 42.946 1.00 48.71 O
TER

ATOM 1 O3' U B 306 10.054 135.857 41.260 1.00 51.55 O
ATOM 2 P A B 307 8.695 135.008 41.414 1.00 52.08 P
ATOM 3 OP1 A B 307 9.053 133.580 41.209 1.00 51.87 O
ATOM 4 OP2 A B 307 7.627 135.627 40.567 1.00 51.01 O
ATOM 5 O5' A B 307 8.298 135.197 42.946 1.00 48.71 O
ATOM 6 C5' A B 307 8.937 134.430 43.981 1.00 45.21 C
ATOM 7 C4' A B 307 8.081 134.436 45.219 1.00 45.09 C
ATOM 8 O4' A B 307 7.917 135.804 45.670 1.00 44.28 O
ATOM 9 C3' A B 307 6.667 133.925 45.002 1.00 45.61 C
ATOM 10 O3' A B 307 6.623 132.515 45.177 1.00 47.29 O
ATOM 11 C2' A B 307 5.882 134.661 46.074 1.00 44.48 C
ATOM 12 O2' A B 307 6.071 134.063 47.340 1.00 46.41 O
ATOM 13 C1' A B 307 6.577 136.023 46.069 1.00 42.61 C
ATOM 14 N9 A B 307 6.014 137.017 45.156 1.00 40.77 N
ATOM 15 C8 A B 307 6.590 137.469 43.996 1.00 40.30 C
ATOM 16 N7 A B 307 5.909 138.412 43.400 1.00 40.13 N
ATOM 17 C5 A B 307 4.800 138.586 44.211 1.00 40.15 C
ATOM 18 C6 A B 307 3.699 139.457 44.132 1.00 40.04 C
ATOM 19 N6 A B 307 3.538 140.365 43.165 1.00 38.96 N
ATOM 20 N1 A B 307 2.760 139.370 45.098 1.00 39.95 N
ATOM 21 C2 A B 307 2.933 138.473 46.077 1.00 40.87 C
ATOM 22 N3 A B 307 3.930 137.609 46.266 1.00 41.96 N
ATOM 23 C4 A B 307 4.842 137.719 45.288 1.00 40.67 C
ATOM 24 P G B 308 5.601 131.637 44.310 1.00 48.19 P
ATOM 25 OP1 G B 308 5.877 130.212 44.614 1.00 49.64 O
ATOM 26 OP2 G B 308 5.651 132.107 42.906 1.00 48.83 O
ATOM 27 O5' G B 308 4.185 132.017 44.925 1.00 48.27 O
TER

Atoms:
C4: (15.405,140.546,41.472)
N3: (15.553,139.199,41.726)
OP1: (10.182,142.212,38.812)
OP2: (8.186,140.725,38.153)
C2: (14.609,138.216,41.560)
C1': (12.313,137.658,40.918)
C3': (9.998,137.230,40.877)
O5': (10.238,139.767,39.225)
O4': (11.946,137.588,39.551)
C5': (9.886,138.501,38.644)
P: (9.301,141.047,39.080)
C4': (10.506,137.371,39.443)
C2': (11.032,138.024,41.665)
O2': (11.118,137.668,43.031)
N1: (13.384,138.655,41.084)
O4: (16.338,141.313,41.716)
O2: (14.843,137.050,41.818)
C6: (13.176,139.985,40.796)
C5: (14.117,140.919,40.971)
O3': (10.054,135.857,41.260)
OP1: (9.053,133.580,41.209)
OP2: (7.627,135.627,40.567)
C3': (6.667,133.925,45.002)
C1': (6.577,136.023,46.069)
C5': (8.937,134.430,43.981)
O4': (7.917,135.804,45.670)
C8: (6.590,137.469,43.996)
O2': (6.071,134.063,47.340)
C6: (3.699,139.457,44.132)
C5: (4.800,138.586,44.211)
C4: (4.842,137.719,45.288)
P: (8.695,135.008,41.414)
C4': (8.081,134.436,45.219)
C2': (5.882,134.661,46.074)
C2: (2.933,138.473,46.077)
N1: (2.760,139.370,45.098)
N3: (3.930,137.609,46.266)
N6: (3.538,140.365,43.165)
N7: (5.909,138.412,43.400)
N9: (6.014,137.017,45.156)
O5': (8.298,135.197,42.946)
O3': (6.623,132.515,45.177)
Image (generated by PyMOL):
PyMOL image
show in jmol