Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0551:0582
Extra
PDB:
ATOM 1 O3' A A 550 -15.829 99.445 95.649 1.00 60.05 O
ATOM 2 P C A 551 -15.000 98.311 96.424 1.00 60.63 P
ATOM 3 OP1 C A 551 -15.655 96.990 96.221 1.00 61.62 O
ATOM 4 OP2 C A 551 -14.756 98.811 97.801 1.00 58.82 O
ATOM 5 O5' C A 551 -13.624 98.250 95.633 1.00 62.43 O
ATOM 6 C5' C A 551 -13.598 97.867 94.250 1.00 61.23 C
ATOM 7 C4' C A 551 -12.222 98.086 93.675 1.00 61.50 C
ATOM 8 O4' C A 551 -11.896 99.498 93.722 1.00 60.71 O
ATOM 9 C3' C A 551 -11.074 97.426 94.417 1.00 61.15 C
ATOM 10 O3' C A 551 -10.949 96.050 94.056 1.00 60.88 O
ATOM 11 C2' C A 551 -9.883 98.251 93.944 1.00 61.34 C
ATOM 12 O2' C A 551 -9.457 97.875 92.650 1.00 62.77 O
ATOM 13 C1' C A 551 -10.497 99.651 93.867 1.00 60.66 C
ATOM 14 N1 C A 551 -10.228 100.514 95.032 1.00 61.28 N
ATOM 15 C2 C A 551 -9.123 101.373 94.986 1.00 61.42 C
ATOM 16 O2 C A 551 -8.405 101.376 93.973 1.00 62.46 O
ATOM 17 N3 C A 551 -8.865 102.180 96.043 1.00 60.77 N
ATOM 18 C4 C A 551 -9.662 102.153 97.112 1.00 60.05 C
ATOM 19 N4 C A 551 -9.370 102.971 98.126 1.00 59.12 N
ATOM 20 C5 C A 551 -10.793 101.289 97.188 1.00 60.23 C
ATOM 21 C6 C A 551 -11.036 100.491 96.137 1.00 61.12 C
ATOM 22 P G A 552 -10.699 94.946 95.198 1.00 62.50 P
ATOM 23 OP1 G A 552 -10.594 93.619 94.535 1.00 60.53 O
ATOM 24 OP2 G A 552 -11.693 95.151 96.279 1.00 62.72 O
ATOM 25 O5' G A 552 -9.276 95.328 95.802 1.00 63.66 O
TER
ATOM 1 O3' A B 581 0.381 106.956 97.491 1.00 54.72 O
ATOM 2 P C B 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 3 OP1 C B 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 4 OP2 C B 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 5 O5' C B 582 -0.868 107.247 95.334 1.00 51.66 O
ATOM 6 C5' C B 582 0.261 107.127 94.461 1.00 49.79 C
ATOM 7 C4' C B 582 -0.057 106.222 93.295 1.00 50.63 C
ATOM 8 O4' C B 582 -0.387 104.893 93.777 1.00 51.65 O
ATOM 9 C3' C B 582 -1.245 106.603 92.428 1.00 48.99 C
ATOM 10 O3' C B 582 -0.909 107.616 91.494 1.00 47.04 O
ATOM 11 C2' C B 582 -1.567 105.278 91.754 1.00 50.36 C
ATOM 12 O2' C B 582 -0.672 104.958 90.706 1.00 48.00 O
ATOM 13 C1' C B 582 -1.347 104.299 92.911 1.00 51.97 C
ATOM 14 N1 C B 582 -2.585 104.046 93.682 1.00 55.33 N
ATOM 15 C2 C B 582 -3.502 103.073 93.215 1.00 56.25 C
ATOM 16 O2 C B 582 -3.224 102.408 92.198 1.00 55.03 O
ATOM 17 N3 C B 582 -4.661 102.886 93.894 1.00 56.32 N
ATOM 18 C4 C B 582 -4.919 103.606 94.990 1.00 55.86 C
ATOM 19 N4 C B 582 -6.090 103.415 95.603 1.00 56.10 N
ATOM 20 C5 C B 582 -3.994 104.566 95.502 1.00 54.45 C
ATOM 21 C6 C B 582 -2.856 104.754 94.824 1.00 54.14 C
ATOM 22 P U B 583 -2.023 108.678 91.033 1.00 48.25 P
ATOM 23 OP1 U B 583 -1.428 109.477 89.930 1.00 48.18 O
ATOM 24 OP2 U B 583 -2.563 109.380 92.224 1.00 43.52 O
ATOM 25 O5' U B 583 -3.162 107.760 90.404 1.00 46.76 O
TER
ATOM 2 P C A 551 -15.000 98.311 96.424 1.00 60.63 P
ATOM 3 OP1 C A 551 -15.655 96.990 96.221 1.00 61.62 O
ATOM 4 OP2 C A 551 -14.756 98.811 97.801 1.00 58.82 O
ATOM 5 O5' C A 551 -13.624 98.250 95.633 1.00 62.43 O
ATOM 6 C5' C A 551 -13.598 97.867 94.250 1.00 61.23 C
ATOM 7 C4' C A 551 -12.222 98.086 93.675 1.00 61.50 C
ATOM 8 O4' C A 551 -11.896 99.498 93.722 1.00 60.71 O
ATOM 9 C3' C A 551 -11.074 97.426 94.417 1.00 61.15 C
ATOM 10 O3' C A 551 -10.949 96.050 94.056 1.00 60.88 O
ATOM 11 C2' C A 551 -9.883 98.251 93.944 1.00 61.34 C
ATOM 12 O2' C A 551 -9.457 97.875 92.650 1.00 62.77 O
ATOM 13 C1' C A 551 -10.497 99.651 93.867 1.00 60.66 C
ATOM 14 N1 C A 551 -10.228 100.514 95.032 1.00 61.28 N
ATOM 15 C2 C A 551 -9.123 101.373 94.986 1.00 61.42 C
ATOM 16 O2 C A 551 -8.405 101.376 93.973 1.00 62.46 O
ATOM 17 N3 C A 551 -8.865 102.180 96.043 1.00 60.77 N
ATOM 18 C4 C A 551 -9.662 102.153 97.112 1.00 60.05 C
ATOM 19 N4 C A 551 -9.370 102.971 98.126 1.00 59.12 N
ATOM 20 C5 C A 551 -10.793 101.289 97.188 1.00 60.23 C
ATOM 21 C6 C A 551 -11.036 100.491 96.137 1.00 61.12 C
ATOM 22 P G A 552 -10.699 94.946 95.198 1.00 62.50 P
ATOM 23 OP1 G A 552 -10.594 93.619 94.535 1.00 60.53 O
ATOM 24 OP2 G A 552 -11.693 95.151 96.279 1.00 62.72 O
ATOM 25 O5' G A 552 -9.276 95.328 95.802 1.00 63.66 O
TER
ATOM 1 O3' A B 581 0.381 106.956 97.491 1.00 54.72 O
ATOM 2 P C B 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 3 OP1 C B 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 4 OP2 C B 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 5 O5' C B 582 -0.868 107.247 95.334 1.00 51.66 O
ATOM 6 C5' C B 582 0.261 107.127 94.461 1.00 49.79 C
ATOM 7 C4' C B 582 -0.057 106.222 93.295 1.00 50.63 C
ATOM 8 O4' C B 582 -0.387 104.893 93.777 1.00 51.65 O
ATOM 9 C3' C B 582 -1.245 106.603 92.428 1.00 48.99 C
ATOM 10 O3' C B 582 -0.909 107.616 91.494 1.00 47.04 O
ATOM 11 C2' C B 582 -1.567 105.278 91.754 1.00 50.36 C
ATOM 12 O2' C B 582 -0.672 104.958 90.706 1.00 48.00 O
ATOM 13 C1' C B 582 -1.347 104.299 92.911 1.00 51.97 C
ATOM 14 N1 C B 582 -2.585 104.046 93.682 1.00 55.33 N
ATOM 15 C2 C B 582 -3.502 103.073 93.215 1.00 56.25 C
ATOM 16 O2 C B 582 -3.224 102.408 92.198 1.00 55.03 O
ATOM 17 N3 C B 582 -4.661 102.886 93.894 1.00 56.32 N
ATOM 18 C4 C B 582 -4.919 103.606 94.990 1.00 55.86 C
ATOM 19 N4 C B 582 -6.090 103.415 95.603 1.00 56.10 N
ATOM 20 C5 C B 582 -3.994 104.566 95.502 1.00 54.45 C
ATOM 21 C6 C B 582 -2.856 104.754 94.824 1.00 54.14 C
ATOM 22 P U B 583 -2.023 108.678 91.033 1.00 48.25 P
ATOM 23 OP1 U B 583 -1.428 109.477 89.930 1.00 48.18 O
ATOM 24 OP2 U B 583 -2.563 109.380 92.224 1.00 43.52 O
ATOM 25 O5' U B 583 -3.162 107.760 90.404 1.00 46.76 O
TER
Atoms:
C2: (-9.123,101.373,94.986)
OP1: (-15.655,96.990,96.221)
OP2: (-14.756,98.811,97.801)
C4: (-9.662,102.153,97.112)
O5': (-13.624,98.250,95.633)
C3': (-11.074,97.426,94.417)
C1': (-10.497,99.651,93.867)
O4': (-11.896,99.498,93.722)
C5': (-13.598,97.867,94.250)
P: (-15.000,98.311,96.424)
O2: (-8.405,101.376,93.973)
C4': (-12.222,98.086,93.675)
C2': (-9.883,98.251,93.944)
O2': (-9.457,97.875,92.650)
N1: (-10.228,100.514,95.032)
N3: (-8.865,102.180,96.043)
N4: (-9.370,102.971,98.126)
C6: (-11.036,100.491,96.137)
C5: (-10.793,101.289,97.188)
O3': (-10.949,96.050,94.056)
OP1: (-15.655,96.990,96.221)
OP2: (-14.756,98.811,97.801)
C4: (-9.662,102.153,97.112)
O5': (-13.624,98.250,95.633)
C3': (-11.074,97.426,94.417)
C1': (-10.497,99.651,93.867)
O4': (-11.896,99.498,93.722)
C5': (-13.598,97.867,94.250)
P: (-15.000,98.311,96.424)
O2: (-8.405,101.376,93.973)
C4': (-12.222,98.086,93.675)
C2': (-9.883,98.251,93.944)
O2': (-9.457,97.875,92.650)
N1: (-10.228,100.514,95.032)
N3: (-8.865,102.180,96.043)
N4: (-9.370,102.971,98.126)
C6: (-11.036,100.491,96.137)
C5: (-10.793,101.289,97.188)
O3': (-10.949,96.050,94.056)
C2: (-3.502,103.073,93.215)
OP1: (-0.113,109.245,96.646)
OP2: (-1.981,107.732,97.509)
C4: (-4.919,103.606,94.990)
O5': (-0.868,107.247,95.334)
C3': (-1.245,106.603,92.428)
C1': (-1.347,104.299,92.911)
O4': (-0.387,104.893,93.777)
C5': (0.261,107.127,94.461)
P: (-0.705,107.893,96.781)
O2: (-3.224,102.408,92.198)
C4': (-0.057,106.222,93.295)
C2': (-1.567,105.278,91.754)
O2': (-0.672,104.958,90.706)
N1: (-2.585,104.046,93.682)
N3: (-4.661,102.886,93.894)
N4: (-6.090,103.415,95.603)
C6: (-2.856,104.754,94.824)
C5: (-3.994,104.566,95.502)
O3': (-0.909,107.616,91.494)
OP1: (-0.113,109.245,96.646)
OP2: (-1.981,107.732,97.509)
C4: (-4.919,103.606,94.990)
O5': (-0.868,107.247,95.334)
C3': (-1.245,106.603,92.428)
C1': (-1.347,104.299,92.911)
O4': (-0.387,104.893,93.777)
C5': (0.261,107.127,94.461)
P: (-0.705,107.893,96.781)
O2: (-3.224,102.408,92.198)
C4': (-0.057,106.222,93.295)
C2': (-1.567,105.278,91.754)
O2': (-0.672,104.958,90.706)
N1: (-2.585,104.046,93.682)
N3: (-4.661,102.886,93.894)
N4: (-6.090,103.415,95.603)
C6: (-2.856,104.754,94.824)
C5: (-3.994,104.566,95.502)
O3': (-0.909,107.616,91.494)
Image (generated by PyMOL):