ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2GCS:B44:B45

Extra

PDB:
ATOM 1 O3' G A 43 39.963 1.727 12.810 1.00 28.83 O
ATOM 2 P U A 44 39.157 1.277 11.479 1.00 29.93 P
ATOM 3 OP1 U A 44 38.525 -0.025 11.779 1.00 32.23 O
ATOM 4 OP2 U A 44 40.070 1.390 10.319 1.00 24.35 O
ATOM 5 O5' U A 44 38.047 2.430 11.311 1.00 32.56 O
ATOM 6 C5' U A 44 36.658 2.145 11.070 1.00 33.41 C
ATOM 7 C4' U A 44 35.778 3.084 11.887 1.00 30.78 C
ATOM 8 O4' U A 44 36.207 3.022 13.249 1.00 30.65 O
ATOM 9 C3' U A 44 35.753 4.570 11.498 1.00 29.36 C
ATOM 10 O3' U A 44 34.401 4.903 11.110 1.00 25.23 O
ATOM 11 C2' U A 44 35.980 5.337 12.819 1.00 28.29 C
ATOM 12 O2' U A 44 35.037 6.342 13.107 1.00 29.65 O
ATOM 13 C1' U A 44 35.870 4.226 13.865 1.00 30.29 C
ATOM 14 N1 U A 44 36.552 4.315 15.160 1.00 30.41 N
ATOM 15 C2 U A 44 35.790 4.743 16.232 1.00 30.73 C
ATOM 16 O2 U A 44 34.626 5.096 16.113 1.00 32.42 O
ATOM 17 N3 U A 44 36.435 4.734 17.444 1.00 27.20 N
ATOM 18 C4 U A 44 37.742 4.356 17.684 1.00 28.59 C
ATOM 19 O4 U A 44 38.178 4.391 18.834 1.00 35.27 O
ATOM 20 C5 U A 44 38.473 3.951 16.519 1.00 30.36 C
ATOM 21 C6 U A 44 37.868 3.952 15.322 1.00 31.72 C
ATOM 22 P G A 45 33.872 4.691 9.597 1.00 25.43 P
ATOM 23 OP1 G A 45 32.427 5.020 9.613 1.00 22.05 O
ATOM 24 OP2 G A 45 34.310 3.376 9.067 1.00 27.29 O
ATOM 25 O5' G A 45 34.614 5.833 8.784 1.00 25.53 O
TER

ATOM 1 O3' U B 44 34.401 4.903 11.110 1.00 25.23 O
ATOM 2 P G B 45 33.872 4.691 9.597 1.00 25.43 P
ATOM 3 OP1 G B 45 32.427 5.020 9.613 1.00 22.05 O
ATOM 4 OP2 G B 45 34.310 3.376 9.067 1.00 27.29 O
ATOM 5 O5' G B 45 34.614 5.833 8.784 1.00 25.53 O
ATOM 6 C5' G B 45 34.292 7.198 8.998 1.00 28.47 C
ATOM 7 C4' G B 45 35.086 8.050 8.050 1.00 29.44 C
ATOM 8 O4' G B 45 36.493 7.835 8.322 1.00 27.58 O
ATOM 9 C3' G B 45 34.918 7.658 6.588 1.00 30.47 C
ATOM 10 O3' G B 45 33.789 8.324 6.026 1.00 30.49 O
ATOM 11 C2' G B 45 36.227 8.136 5.985 1.00 30.87 C
ATOM 12 O2' G B 45 36.225 9.535 5.783 1.00 32.31 O
ATOM 13 C1' G B 45 37.213 7.789 7.105 1.00 31.53 C
ATOM 14 N9 G B 45 37.820 6.467 6.990 1.00 29.56 N
ATOM 15 C8 G B 45 37.552 5.362 7.762 1.00 31.43 C
ATOM 16 N7 G B 45 38.281 4.327 7.444 1.00 32.95 N
ATOM 17 C5 G B 45 39.072 4.773 6.395 1.00 30.83 C
ATOM 18 C6 G B 45 40.066 4.096 5.638 1.00 31.86 C
ATOM 19 O6 G B 45 40.459 2.932 5.750 1.00 29.28 O
ATOM 20 N1 G B 45 40.616 4.923 4.663 1.00 31.06 N
ATOM 21 C2 G B 45 40.254 6.231 4.443 1.00 32.01 C
ATOM 22 N2 G B 45 40.891 6.867 3.445 1.00 32.12 N
ATOM 23 N3 G B 45 39.334 6.872 5.145 1.00 31.36 N
ATOM 24 C4 G B 45 38.790 6.089 6.097 1.00 31.04 C
ATOM 25 P C B 46 32.839 7.550 4.987 1.00 31.46 P
ATOM 26 OP1 C B 46 31.711 8.452 4.649 1.00 34.64 O
ATOM 27 OP2 C B 46 32.557 6.192 5.510 1.00 32.81 O
ATOM 28 O5' C B 46 33.752 7.403 3.692 1.00 32.37 O
TER

Atoms:
C4: (37.742,4.356,17.684)
N3: (36.435,4.734,17.444)
OP1: (38.525,-0.025,11.779)
OP2: (40.070,1.390,10.319)
C2: (35.790,4.743,16.232)
C1': (35.870,4.226,13.865)
C3': (35.753,4.570,11.498)
O5': (38.047,2.430,11.311)
O4': (36.207,3.022,13.249)
C5': (36.658,2.145,11.070)
P: (39.157,1.277,11.479)
C4': (35.778,3.084,11.887)
C2': (35.980,5.337,12.819)
O2': (35.037,6.342,13.107)
N1: (36.552,4.315,15.160)
O4: (38.178,4.391,18.834)
O2: (34.626,5.096,16.113)
C6: (37.868,3.952,15.322)
C5: (38.473,3.951,16.519)
O3': (34.401,4.903,11.110)
OP1: (32.427,5.020,9.613)
OP2: (34.310,3.376,9.067)
C3': (34.918,7.658,6.588)
C1': (37.213,7.789,7.105)
C5': (34.292,7.198,8.998)
O6: (40.459,2.932,5.750)
O4': (36.493,7.835,8.322)
C8: (37.552,5.362,7.762)
C2: (40.254,6.231,4.443)
C6: (40.066,4.096,5.638)
C5: (39.072,4.773,6.395)
C4: (38.790,6.089,6.097)
P: (33.872,4.691,9.597)
C4': (35.086,8.050,8.050)
C2': (36.227,8.136,5.985)
O2': (36.225,9.535,5.783)
N1: (40.616,4.923,4.663)
N2: (40.891,6.867,3.445)
N3: (39.334,6.872,5.145)
N7: (38.281,4.327,7.444)
N9: (37.820,6.467,6.990)
O5': (34.614,5.833,8.784)
O3': (33.789,8.324,6.026)
Image (generated by PyMOL):
PyMOL image
show in jmol