Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11338:418
Extra
PDB:
ATOM 1 O3' A A1337 93.312 4.327 78.242 1.00 38.61 O
ATOM 2 P A A1338 92.293 4.718 77.072 1.00 40.32 P
ATOM 3 OP1 A A1338 92.343 3.621 76.099 1.00 40.15 O
ATOM 4 OP2 A A1338 92.641 6.109 76.617 1.00 40.45 O
ATOM 5 O5' A A1338 90.889 4.741 77.801 1.00 40.09 O
ATOM 6 C5' A A1338 90.359 3.581 78.403 1.00 39.96 C
ATOM 7 C4' A A1338 89.174 3.901 79.282 1.00 39.83 C
ATOM 8 O4' A A1338 89.553 4.818 80.360 1.00 40.12 O
ATOM 9 C3' A A1338 88.026 4.616 78.618 1.00 39.55 C
ATOM 10 O3' A A1338 87.280 3.776 77.763 1.00 39.23 O
ATOM 11 C2' A A1338 87.258 5.155 79.831 1.00 39.58 C
ATOM 12 O2' A A1338 86.526 4.145 80.486 1.00 39.44 O
ATOM 13 C1' A A1338 88.417 5.578 80.745 1.00 39.98 C
ATOM 14 N9 A A1338 88.710 7.003 80.576 1.00 40.14 N
ATOM 15 C8 A A1338 89.645 7.589 79.835 1.00 40.29 C
ATOM 16 N7 A A1338 89.596 8.890 79.843 1.00 40.41 N
ATOM 17 C5 A A1338 88.509 9.166 80.593 1.00 40.30 C
ATOM 18 C6 A A1338 87.908 10.367 80.942 1.00 40.35 C
ATOM 19 N6 A A1338 88.333 11.576 80.597 1.00 40.52 N
ATOM 20 N1 A A1338 86.834 10.294 81.720 1.00 40.22 N
ATOM 21 C2 A A1338 86.387 9.093 82.072 1.00 40.05 C
ATOM 22 N3 A A1338 86.873 7.899 81.789 1.00 40.00 N
ATOM 23 C4 A A1338 87.955 8.017 81.035 1.00 40.13 C
ATOM 24 P G A1339 86.601 4.338 76.410 1.00 39.38 P
ATOM 25 OP1 G A1339 85.779 3.255 75.902 1.00 39.09 O
ATOM 26 OP2 G A1339 87.630 4.879 75.536 1.00 39.54 O
ATOM 27 O5' G A1339 85.683 5.512 76.936 1.00 39.34 O
TER
ATOM 1 O3' U B 17 78.608 4.644 79.843 1.00 40.92 O
ATOM 2 P C B 18 79.100 3.654 80.990 1.00 38.07 P
ATOM 3 OP1 C B 18 79.356 2.331 80.326 1.00 38.06 O
ATOM 4 OP2 C B 18 78.099 3.732 82.107 1.00 37.83 O
ATOM 5 O5' C B 18 80.501 4.293 81.448 1.00 38.65 O
ATOM 6 C5' C B 18 81.656 4.096 80.673 1.00 39.00 C
ATOM 7 C4' C B 18 82.790 4.924 81.159 1.00 39.53 C
ATOM 8 O4' C B 18 82.419 6.313 81.213 1.00 39.49 O
ATOM 9 C3' C B 18 83.271 4.647 82.557 1.00 39.82 C
ATOM 10 O3' C B 18 84.025 3.486 82.638 1.00 40.05 O
ATOM 11 C2' C B 18 84.062 5.889 82.864 1.00 40.25 C
ATOM 12 O2' C B 18 85.298 5.857 82.155 1.00 40.69 O
ATOM 13 C1' C B 18 83.154 6.951 82.235 1.00 39.92 C
ATOM 14 N1 C B 18 82.189 7.506 83.211 1.00 39.70 N
ATOM 15 C2 C B 18 82.593 8.556 84.040 1.00 40.05 C
ATOM 16 O2 C B 18 83.748 8.993 83.952 1.00 40.54 O
ATOM 17 N3 C B 18 81.705 9.062 84.928 1.00 39.88 N
ATOM 18 C4 C B 18 80.479 8.616 85.001 1.00 39.39 C
ATOM 19 N4 C B 18 79.724 9.212 85.908 1.00 39.30 N
ATOM 20 C5 C B 18 80.023 7.565 84.178 1.00 39.01 C
ATOM 21 C6 C B 18 80.897 7.043 83.317 1.00 39.18 C
ATOM 22 P U B 19 83.810 2.534 83.859 1.00 40.33 P
ATOM 23 OP1 U B 19 84.495 1.346 83.543 1.00 40.52 O
ATOM 24 OP2 U B 19 82.370 2.472 84.166 1.00 39.80 O
ATOM 25 O5' U B 19 84.538 3.289 85.011 1.00 40.79 O
TER
ATOM 2 P A A1338 92.293 4.718 77.072 1.00 40.32 P
ATOM 3 OP1 A A1338 92.343 3.621 76.099 1.00 40.15 O
ATOM 4 OP2 A A1338 92.641 6.109 76.617 1.00 40.45 O
ATOM 5 O5' A A1338 90.889 4.741 77.801 1.00 40.09 O
ATOM 6 C5' A A1338 90.359 3.581 78.403 1.00 39.96 C
ATOM 7 C4' A A1338 89.174 3.901 79.282 1.00 39.83 C
ATOM 8 O4' A A1338 89.553 4.818 80.360 1.00 40.12 O
ATOM 9 C3' A A1338 88.026 4.616 78.618 1.00 39.55 C
ATOM 10 O3' A A1338 87.280 3.776 77.763 1.00 39.23 O
ATOM 11 C2' A A1338 87.258 5.155 79.831 1.00 39.58 C
ATOM 12 O2' A A1338 86.526 4.145 80.486 1.00 39.44 O
ATOM 13 C1' A A1338 88.417 5.578 80.745 1.00 39.98 C
ATOM 14 N9 A A1338 88.710 7.003 80.576 1.00 40.14 N
ATOM 15 C8 A A1338 89.645 7.589 79.835 1.00 40.29 C
ATOM 16 N7 A A1338 89.596 8.890 79.843 1.00 40.41 N
ATOM 17 C5 A A1338 88.509 9.166 80.593 1.00 40.30 C
ATOM 18 C6 A A1338 87.908 10.367 80.942 1.00 40.35 C
ATOM 19 N6 A A1338 88.333 11.576 80.597 1.00 40.52 N
ATOM 20 N1 A A1338 86.834 10.294 81.720 1.00 40.22 N
ATOM 21 C2 A A1338 86.387 9.093 82.072 1.00 40.05 C
ATOM 22 N3 A A1338 86.873 7.899 81.789 1.00 40.00 N
ATOM 23 C4 A A1338 87.955 8.017 81.035 1.00 40.13 C
ATOM 24 P G A1339 86.601 4.338 76.410 1.00 39.38 P
ATOM 25 OP1 G A1339 85.779 3.255 75.902 1.00 39.09 O
ATOM 26 OP2 G A1339 87.630 4.879 75.536 1.00 39.54 O
ATOM 27 O5' G A1339 85.683 5.512 76.936 1.00 39.34 O
TER
ATOM 1 O3' U B 17 78.608 4.644 79.843 1.00 40.92 O
ATOM 2 P C B 18 79.100 3.654 80.990 1.00 38.07 P
ATOM 3 OP1 C B 18 79.356 2.331 80.326 1.00 38.06 O
ATOM 4 OP2 C B 18 78.099 3.732 82.107 1.00 37.83 O
ATOM 5 O5' C B 18 80.501 4.293 81.448 1.00 38.65 O
ATOM 6 C5' C B 18 81.656 4.096 80.673 1.00 39.00 C
ATOM 7 C4' C B 18 82.790 4.924 81.159 1.00 39.53 C
ATOM 8 O4' C B 18 82.419 6.313 81.213 1.00 39.49 O
ATOM 9 C3' C B 18 83.271 4.647 82.557 1.00 39.82 C
ATOM 10 O3' C B 18 84.025 3.486 82.638 1.00 40.05 O
ATOM 11 C2' C B 18 84.062 5.889 82.864 1.00 40.25 C
ATOM 12 O2' C B 18 85.298 5.857 82.155 1.00 40.69 O
ATOM 13 C1' C B 18 83.154 6.951 82.235 1.00 39.92 C
ATOM 14 N1 C B 18 82.189 7.506 83.211 1.00 39.70 N
ATOM 15 C2 C B 18 82.593 8.556 84.040 1.00 40.05 C
ATOM 16 O2 C B 18 83.748 8.993 83.952 1.00 40.54 O
ATOM 17 N3 C B 18 81.705 9.062 84.928 1.00 39.88 N
ATOM 18 C4 C B 18 80.479 8.616 85.001 1.00 39.39 C
ATOM 19 N4 C B 18 79.724 9.212 85.908 1.00 39.30 N
ATOM 20 C5 C B 18 80.023 7.565 84.178 1.00 39.01 C
ATOM 21 C6 C B 18 80.897 7.043 83.317 1.00 39.18 C
ATOM 22 P U B 19 83.810 2.534 83.859 1.00 40.33 P
ATOM 23 OP1 U B 19 84.495 1.346 83.543 1.00 40.52 O
ATOM 24 OP2 U B 19 82.370 2.472 84.166 1.00 39.80 O
ATOM 25 O5' U B 19 84.538 3.289 85.011 1.00 40.79 O
TER
Atoms:
OP1: (92.343,3.621,76.099)
OP2: (92.641,6.109,76.617)
C3': (88.026,4.616,78.618)
C1': (88.417,5.578,80.745)
C5': (90.359,3.581,78.403)
O4': (89.553,4.818,80.360)
C8: (89.645,7.589,79.835)
O2': (86.526,4.145,80.486)
C6: (87.908,10.367,80.942)
C5: (88.509,9.166,80.593)
C4: (87.955,8.017,81.035)
P: (92.293,4.718,77.072)
C4': (89.174,3.901,79.282)
C2': (87.258,5.155,79.831)
C2: (86.387,9.093,82.072)
N1: (86.834,10.294,81.720)
N3: (86.873,7.899,81.789)
N6: (88.333,11.576,80.597)
N7: (89.596,8.890,79.843)
N9: (88.710,7.003,80.576)
O5': (90.889,4.741,77.801)
O3': (87.280,3.776,77.763)
OP2: (92.641,6.109,76.617)
C3': (88.026,4.616,78.618)
C1': (88.417,5.578,80.745)
C5': (90.359,3.581,78.403)
O4': (89.553,4.818,80.360)
C8: (89.645,7.589,79.835)
O2': (86.526,4.145,80.486)
C6: (87.908,10.367,80.942)
C5: (88.509,9.166,80.593)
C4: (87.955,8.017,81.035)
P: (92.293,4.718,77.072)
C4': (89.174,3.901,79.282)
C2': (87.258,5.155,79.831)
C2: (86.387,9.093,82.072)
N1: (86.834,10.294,81.720)
N3: (86.873,7.899,81.789)
N6: (88.333,11.576,80.597)
N7: (89.596,8.890,79.843)
N9: (88.710,7.003,80.576)
O5': (90.889,4.741,77.801)
O3': (87.280,3.776,77.763)
C2: (82.593,8.556,84.040)
OP1: (79.356,2.331,80.326)
OP2: (78.099,3.732,82.107)
C4: (80.479,8.616,85.001)
O5': (80.501,4.293,81.448)
C3': (83.271,4.647,82.557)
C1': (83.154,6.951,82.235)
O4': (82.419,6.313,81.213)
C5': (81.656,4.096,80.673)
P: (79.100,3.654,80.990)
O2: (83.748,8.993,83.952)
C4': (82.790,4.924,81.159)
C2': (84.062,5.889,82.864)
O2': (85.298,5.857,82.155)
N1: (82.189,7.506,83.211)
N3: (81.705,9.062,84.928)
N4: (79.724,9.212,85.908)
C6: (80.897,7.043,83.317)
C5: (80.023,7.565,84.178)
O3': (84.025,3.486,82.638)
OP1: (79.356,2.331,80.326)
OP2: (78.099,3.732,82.107)
C4: (80.479,8.616,85.001)
O5': (80.501,4.293,81.448)
C3': (83.271,4.647,82.557)
C1': (83.154,6.951,82.235)
O4': (82.419,6.313,81.213)
C5': (81.656,4.096,80.673)
P: (79.100,3.654,80.990)
O2: (83.748,8.993,83.952)
C4': (82.790,4.924,81.159)
C2': (84.062,5.889,82.864)
O2': (85.298,5.857,82.155)
N1: (82.189,7.506,83.211)
N3: (81.705,9.062,84.928)
N4: (79.724,9.212,85.908)
C6: (80.897,7.043,83.317)
C5: (80.023,7.565,84.178)
O3': (84.025,3.486,82.638)
Image (generated by PyMOL):