Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0140:0428
Extra
PDB:
ATOM 1 O3' A A 139 60.088 128.378 41.142 1.00 46.64 O
ATOM 2 P A A 140 61.641 128.124 41.459 1.00 47.26 P
ATOM 3 OP1 A A 140 61.772 128.230 42.928 1.00 50.01 O
ATOM 4 OP2 A A 140 62.455 129.001 40.578 1.00 50.47 O
ATOM 5 O5' A A 140 61.915 126.607 41.044 1.00 45.15 O
ATOM 6 C5' A A 140 61.167 125.542 41.640 1.00 41.72 C
ATOM 7 C4' A A 140 60.439 124.749 40.578 1.00 42.06 C
ATOM 8 O4' A A 140 59.849 125.657 39.611 1.00 40.83 O
ATOM 9 C3' A A 140 61.264 123.795 39.727 1.00 41.68 C
ATOM 10 O3' A A 140 61.428 122.549 40.405 1.00 42.78 O
ATOM 11 C2' A A 140 60.373 123.619 38.504 1.00 41.45 C
ATOM 12 O2' A A 140 59.306 122.730 38.765 1.00 39.91 O
ATOM 13 C1' A A 140 59.805 125.032 38.339 1.00 41.08 C
ATOM 14 N9 A A 140 60.542 125.858 37.377 1.00 40.30 N
ATOM 15 C8 A A 140 61.462 126.848 37.621 1.00 39.21 C
ATOM 16 N7 A A 140 61.939 127.405 36.534 1.00 37.44 N
ATOM 17 C5 A A 140 61.294 126.734 35.503 1.00 38.14 C
ATOM 18 C6 A A 140 61.357 126.857 34.101 1.00 37.31 C
ATOM 19 N6 A A 140 62.142 127.729 33.460 1.00 37.28 N
ATOM 20 N1 A A 140 60.575 126.043 33.366 1.00 35.54 N
ATOM 21 C2 A A 140 59.793 125.168 33.996 1.00 35.93 C
ATOM 22 N3 A A 140 59.647 124.952 35.296 1.00 37.79 N
ATOM 23 C4 A A 140 60.433 125.779 36.006 1.00 39.28 C
ATOM 24 P C A 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 25 OP1 C A 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 26 OP2 C A 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 27 O5' C A 141 62.211 121.081 38.512 1.00 40.82 O
TER
ATOM 1 O3' A B 427 56.516 116.273 35.251 1.00 38.39 O
ATOM 2 P C B 428 55.304 117.201 35.747 1.00 40.15 P
ATOM 3 OP1 C B 428 54.994 116.781 37.141 1.00 40.88 O
ATOM 4 OP2 C B 428 54.236 117.197 34.721 1.00 39.50 O
ATOM 5 O5' C B 428 55.916 118.670 35.804 1.00 41.69 O
ATOM 6 C5' C B 428 56.937 119.018 36.765 1.00 43.24 C
ATOM 7 C4' C B 428 57.380 120.444 36.554 1.00 44.34 C
ATOM 8 O4' C B 428 57.871 120.581 35.196 1.00 44.61 O
ATOM 9 C3' C B 428 56.286 121.497 36.688 1.00 44.07 C
ATOM 10 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 11 C2' C B 428 56.806 122.627 35.808 1.00 42.97 C
ATOM 12 O2' C B 428 57.773 123.418 36.470 1.00 40.64 O
ATOM 13 C1' C B 428 57.502 121.848 34.686 1.00 43.04 C
ATOM 14 N1 C B 428 56.701 121.645 33.467 1.00 42.92 N
ATOM 15 C2 C B 428 56.726 122.628 32.472 1.00 43.09 C
ATOM 16 O2 C B 428 57.403 123.649 32.646 1.00 43.66 O
ATOM 17 N3 C B 428 56.019 122.439 31.342 1.00 43.68 N
ATOM 18 C4 C B 428 55.313 121.323 31.177 1.00 42.18 C
ATOM 19 N4 C B 428 54.656 121.171 30.029 1.00 41.63 N
ATOM 20 C5 C B 428 55.256 120.312 32.175 1.00 41.45 C
ATOM 21 C6 C B 428 55.956 120.513 33.295 1.00 41.83 C
ATOM 22 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 23 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 24 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 25 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
TER
ATOM 2 P A A 140 61.641 128.124 41.459 1.00 47.26 P
ATOM 3 OP1 A A 140 61.772 128.230 42.928 1.00 50.01 O
ATOM 4 OP2 A A 140 62.455 129.001 40.578 1.00 50.47 O
ATOM 5 O5' A A 140 61.915 126.607 41.044 1.00 45.15 O
ATOM 6 C5' A A 140 61.167 125.542 41.640 1.00 41.72 C
ATOM 7 C4' A A 140 60.439 124.749 40.578 1.00 42.06 C
ATOM 8 O4' A A 140 59.849 125.657 39.611 1.00 40.83 O
ATOM 9 C3' A A 140 61.264 123.795 39.727 1.00 41.68 C
ATOM 10 O3' A A 140 61.428 122.549 40.405 1.00 42.78 O
ATOM 11 C2' A A 140 60.373 123.619 38.504 1.00 41.45 C
ATOM 12 O2' A A 140 59.306 122.730 38.765 1.00 39.91 O
ATOM 13 C1' A A 140 59.805 125.032 38.339 1.00 41.08 C
ATOM 14 N9 A A 140 60.542 125.858 37.377 1.00 40.30 N
ATOM 15 C8 A A 140 61.462 126.848 37.621 1.00 39.21 C
ATOM 16 N7 A A 140 61.939 127.405 36.534 1.00 37.44 N
ATOM 17 C5 A A 140 61.294 126.734 35.503 1.00 38.14 C
ATOM 18 C6 A A 140 61.357 126.857 34.101 1.00 37.31 C
ATOM 19 N6 A A 140 62.142 127.729 33.460 1.00 37.28 N
ATOM 20 N1 A A 140 60.575 126.043 33.366 1.00 35.54 N
ATOM 21 C2 A A 140 59.793 125.168 33.996 1.00 35.93 C
ATOM 22 N3 A A 140 59.647 124.952 35.296 1.00 37.79 N
ATOM 23 C4 A A 140 60.433 125.779 36.006 1.00 39.28 C
ATOM 24 P C A 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 25 OP1 C A 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 26 OP2 C A 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 27 O5' C A 141 62.211 121.081 38.512 1.00 40.82 O
TER
ATOM 1 O3' A B 427 56.516 116.273 35.251 1.00 38.39 O
ATOM 2 P C B 428 55.304 117.201 35.747 1.00 40.15 P
ATOM 3 OP1 C B 428 54.994 116.781 37.141 1.00 40.88 O
ATOM 4 OP2 C B 428 54.236 117.197 34.721 1.00 39.50 O
ATOM 5 O5' C B 428 55.916 118.670 35.804 1.00 41.69 O
ATOM 6 C5' C B 428 56.937 119.018 36.765 1.00 43.24 C
ATOM 7 C4' C B 428 57.380 120.444 36.554 1.00 44.34 C
ATOM 8 O4' C B 428 57.871 120.581 35.196 1.00 44.61 O
ATOM 9 C3' C B 428 56.286 121.497 36.688 1.00 44.07 C
ATOM 10 O3' C B 428 56.188 121.909 38.055 1.00 45.59 O
ATOM 11 C2' C B 428 56.806 122.627 35.808 1.00 42.97 C
ATOM 12 O2' C B 428 57.773 123.418 36.470 1.00 40.64 O
ATOM 13 C1' C B 428 57.502 121.848 34.686 1.00 43.04 C
ATOM 14 N1 C B 428 56.701 121.645 33.467 1.00 42.92 N
ATOM 15 C2 C B 428 56.726 122.628 32.472 1.00 43.09 C
ATOM 16 O2 C B 428 57.403 123.649 32.646 1.00 43.66 O
ATOM 17 N3 C B 428 56.019 122.439 31.342 1.00 43.68 N
ATOM 18 C4 C B 428 55.313 121.323 31.177 1.00 42.18 C
ATOM 19 N4 C B 428 54.656 121.171 30.029 1.00 41.63 N
ATOM 20 C5 C B 428 55.256 120.312 32.175 1.00 41.45 C
ATOM 21 C6 C B 428 55.956 120.513 33.295 1.00 41.83 C
ATOM 22 P A B 429 54.788 122.430 38.651 1.00 46.06 P
ATOM 23 OP1 A B 429 55.011 122.677 40.102 1.00 46.87 O
ATOM 24 OP2 A B 429 53.709 121.503 38.217 1.00 45.89 O
ATOM 25 O5' A B 429 54.561 123.850 37.973 1.00 45.29 O
TER
Atoms:
OP1: (61.772,128.230,42.928)
OP2: (62.455,129.001,40.578)
C3': (61.264,123.795,39.727)
C1': (59.805,125.032,38.339)
C5': (61.167,125.542,41.640)
O4': (59.849,125.657,39.611)
C8: (61.462,126.848,37.621)
O2': (59.306,122.730,38.765)
C6: (61.357,126.857,34.101)
C5: (61.294,126.734,35.503)
C4: (60.433,125.779,36.006)
P: (61.641,128.124,41.459)
C4': (60.439,124.749,40.578)
C2': (60.373,123.619,38.504)
C2: (59.793,125.168,33.996)
N1: (60.575,126.043,33.366)
N3: (59.647,124.952,35.296)
N6: (62.142,127.729,33.460)
N7: (61.939,127.405,36.534)
N9: (60.542,125.858,37.377)
O5': (61.915,126.607,41.044)
O3': (61.428,122.549,40.405)
OP2: (62.455,129.001,40.578)
C3': (61.264,123.795,39.727)
C1': (59.805,125.032,38.339)
C5': (61.167,125.542,41.640)
O4': (59.849,125.657,39.611)
C8: (61.462,126.848,37.621)
O2': (59.306,122.730,38.765)
C6: (61.357,126.857,34.101)
C5: (61.294,126.734,35.503)
C4: (60.433,125.779,36.006)
P: (61.641,128.124,41.459)
C4': (60.439,124.749,40.578)
C2': (60.373,123.619,38.504)
C2: (59.793,125.168,33.996)
N1: (60.575,126.043,33.366)
N3: (59.647,124.952,35.296)
N6: (62.142,127.729,33.460)
N7: (61.939,127.405,36.534)
N9: (60.542,125.858,37.377)
O5': (61.915,126.607,41.044)
O3': (61.428,122.549,40.405)
C2: (56.726,122.628,32.472)
OP1: (54.994,116.781,37.141)
OP2: (54.236,117.197,34.721)
C4: (55.313,121.323,31.177)
O5': (55.916,118.670,35.804)
C3': (56.286,121.497,36.688)
C1': (57.502,121.848,34.686)
O4': (57.871,120.581,35.196)
C5': (56.937,119.018,36.765)
P: (55.304,117.201,35.747)
O2: (57.403,123.649,32.646)
C4': (57.380,120.444,36.554)
C2': (56.806,122.627,35.808)
O2': (57.773,123.418,36.470)
N1: (56.701,121.645,33.467)
N3: (56.019,122.439,31.342)
N4: (54.656,121.171,30.029)
C6: (55.956,120.513,33.295)
C5: (55.256,120.312,32.175)
O3': (56.188,121.909,38.055)
OP1: (54.994,116.781,37.141)
OP2: (54.236,117.197,34.721)
C4: (55.313,121.323,31.177)
O5': (55.916,118.670,35.804)
C3': (56.286,121.497,36.688)
C1': (57.502,121.848,34.686)
O4': (57.871,120.581,35.196)
C5': (56.937,119.018,36.765)
P: (55.304,117.201,35.747)
O2: (57.403,123.649,32.646)
C4': (57.380,120.444,36.554)
C2': (56.806,122.627,35.808)
O2': (57.773,123.418,36.470)
N1: (56.701,121.645,33.467)
N3: (56.019,122.439,31.342)
N4: (54.656,121.171,30.029)
C6: (55.956,120.513,33.295)
C5: (55.256,120.312,32.175)
O3': (56.188,121.909,38.055)
Image (generated by PyMOL):