Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:437:438
Extra
PDB:
ATOM 1 O3' A A 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 2 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 3 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 4 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 5 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
ATOM 6 C5' U A 37 58.606 -4.586 139.162 1.00 55.03 C
ATOM 7 C4' U A 37 59.953 -4.054 138.741 1.00 55.00 C
ATOM 8 O4' U A 37 60.975 -4.598 139.620 1.00 55.60 O
ATOM 9 C3' U A 37 60.379 -4.413 137.325 1.00 54.16 C
ATOM 10 O3' U A 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 11 C2' U A 37 61.249 -5.647 137.557 1.00 54.28 C
ATOM 12 O2' U A 37 62.152 -5.954 136.521 1.00 53.77 O
ATOM 13 C1' U A 37 61.954 -5.264 138.856 1.00 55.20 C
ATOM 14 N1 U A 37 62.442 -6.416 139.641 1.00 55.62 N
ATOM 15 C2 U A 37 63.802 -6.757 139.700 1.00 55.83 C
ATOM 16 O2 U A 37 64.725 -6.193 139.153 1.00 55.72 O
ATOM 17 N3 U A 37 64.098 -7.854 140.428 1.00 56.22 N
ATOM 18 C4 U A 37 63.198 -8.633 141.093 1.00 56.41 C
ATOM 19 O4 U A 37 63.607 -9.603 141.718 1.00 56.77 O
ATOM 20 C5 U A 37 61.843 -8.218 140.992 1.00 56.18 C
ATOM 21 C6 U A 37 61.509 -7.150 140.287 1.00 55.80 C
ATOM 22 P G A 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 23 OP1 G A 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 24 OP2 G A 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 25 O5' G A 38 59.305 -2.523 135.368 1.00 51.58 O
TER
ATOM 1 O3' U B 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 2 P G B 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 3 OP1 G B 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 4 OP2 G B 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 5 O5' G B 38 59.305 -2.523 135.368 1.00 51.58 O
ATOM 6 C5' G B 38 59.573 -3.084 134.101 1.00 50.82 C
ATOM 7 C4' G B 38 58.546 -2.621 133.145 1.00 50.21 C
ATOM 8 O4' G B 38 57.248 -2.979 133.695 1.00 50.33 O
ATOM 9 C3' G B 38 58.529 -1.111 132.963 1.00 50.30 C
ATOM 10 O3' G B 38 58.168 -0.778 131.622 1.00 49.56 O
ATOM 11 C2' G B 38 57.451 -0.659 133.934 1.00 50.80 C
ATOM 12 O2' G B 38 56.812 0.530 133.571 1.00 50.70 O
ATOM 13 C1' G B 38 56.480 -1.824 133.917 1.00 50.53 C
ATOM 14 N9 G B 38 55.764 -1.982 135.173 1.00 51.16 N
ATOM 15 C8 G B 38 56.353 -1.829 136.406 1.00 51.96 C
ATOM 16 N7 G B 38 55.529 -1.979 137.398 1.00 52.46 N
ATOM 17 C5 G B 38 54.303 -2.208 136.772 1.00 51.96 C
ATOM 18 C6 G B 38 53.020 -2.436 137.330 1.00 52.17 C
ATOM 19 O6 G B 38 52.635 -2.496 138.496 1.00 52.85 O
ATOM 20 N1 G B 38 52.065 -2.630 136.367 1.00 51.52 N
ATOM 21 C2 G B 38 52.265 -2.615 135.040 1.00 50.75 C
ATOM 22 N2 G B 38 51.107 -2.853 134.409 1.00 50.30 N
ATOM 23 N3 G B 38 53.452 -2.408 134.457 1.00 50.51 N
ATOM 24 C4 G B 38 54.423 -2.220 135.386 1.00 51.15 C
ATOM 25 P A B 39 59.295 -0.268 130.594 1.00 46.64 P
ATOM 26 OP1 A B 39 60.537 -0.150 131.360 1.00 47.24 O
ATOM 27 OP2 A B 39 58.761 0.935 129.910 1.00 46.38 O
ATOM 28 O5' A B 39 59.413 -1.472 129.562 1.00 45.94 O
TER
ATOM 2 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 3 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 4 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 5 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
ATOM 6 C5' U A 37 58.606 -4.586 139.162 1.00 55.03 C
ATOM 7 C4' U A 37 59.953 -4.054 138.741 1.00 55.00 C
ATOM 8 O4' U A 37 60.975 -4.598 139.620 1.00 55.60 O
ATOM 9 C3' U A 37 60.379 -4.413 137.325 1.00 54.16 C
ATOM 10 O3' U A 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 11 C2' U A 37 61.249 -5.647 137.557 1.00 54.28 C
ATOM 12 O2' U A 37 62.152 -5.954 136.521 1.00 53.77 O
ATOM 13 C1' U A 37 61.954 -5.264 138.856 1.00 55.20 C
ATOM 14 N1 U A 37 62.442 -6.416 139.641 1.00 55.62 N
ATOM 15 C2 U A 37 63.802 -6.757 139.700 1.00 55.83 C
ATOM 16 O2 U A 37 64.725 -6.193 139.153 1.00 55.72 O
ATOM 17 N3 U A 37 64.098 -7.854 140.428 1.00 56.22 N
ATOM 18 C4 U A 37 63.198 -8.633 141.093 1.00 56.41 C
ATOM 19 O4 U A 37 63.607 -9.603 141.718 1.00 56.77 O
ATOM 20 C5 U A 37 61.843 -8.218 140.992 1.00 56.18 C
ATOM 21 C6 U A 37 61.509 -7.150 140.287 1.00 55.80 C
ATOM 22 P G A 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 23 OP1 G A 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 24 OP2 G A 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 25 O5' G A 38 59.305 -2.523 135.368 1.00 51.58 O
TER
ATOM 1 O3' U B 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 2 P G B 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 3 OP1 G B 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 4 OP2 G B 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 5 O5' G B 38 59.305 -2.523 135.368 1.00 51.58 O
ATOM 6 C5' G B 38 59.573 -3.084 134.101 1.00 50.82 C
ATOM 7 C4' G B 38 58.546 -2.621 133.145 1.00 50.21 C
ATOM 8 O4' G B 38 57.248 -2.979 133.695 1.00 50.33 O
ATOM 9 C3' G B 38 58.529 -1.111 132.963 1.00 50.30 C
ATOM 10 O3' G B 38 58.168 -0.778 131.622 1.00 49.56 O
ATOM 11 C2' G B 38 57.451 -0.659 133.934 1.00 50.80 C
ATOM 12 O2' G B 38 56.812 0.530 133.571 1.00 50.70 O
ATOM 13 C1' G B 38 56.480 -1.824 133.917 1.00 50.53 C
ATOM 14 N9 G B 38 55.764 -1.982 135.173 1.00 51.16 N
ATOM 15 C8 G B 38 56.353 -1.829 136.406 1.00 51.96 C
ATOM 16 N7 G B 38 55.529 -1.979 137.398 1.00 52.46 N
ATOM 17 C5 G B 38 54.303 -2.208 136.772 1.00 51.96 C
ATOM 18 C6 G B 38 53.020 -2.436 137.330 1.00 52.17 C
ATOM 19 O6 G B 38 52.635 -2.496 138.496 1.00 52.85 O
ATOM 20 N1 G B 38 52.065 -2.630 136.367 1.00 51.52 N
ATOM 21 C2 G B 38 52.265 -2.615 135.040 1.00 50.75 C
ATOM 22 N2 G B 38 51.107 -2.853 134.409 1.00 50.30 N
ATOM 23 N3 G B 38 53.452 -2.408 134.457 1.00 50.51 N
ATOM 24 C4 G B 38 54.423 -2.220 135.386 1.00 51.15 C
ATOM 25 P A B 39 59.295 -0.268 130.594 1.00 46.64 P
ATOM 26 OP1 A B 39 60.537 -0.150 131.360 1.00 47.24 O
ATOM 27 OP2 A B 39 58.761 0.935 129.910 1.00 46.38 O
ATOM 28 O5' A B 39 59.413 -1.472 129.562 1.00 45.94 O
TER
Atoms:
C4: (63.198,-8.633,141.093)
N3: (64.098,-7.854,140.428)
OP1: (57.449,-8.254,139.202)
OP2: (56.749,-6.447,140.892)
C2: (63.802,-6.757,139.700)
C1': (61.954,-5.264,138.856)
C3': (60.379,-4.413,137.325)
O5': (58.597,-6.012,139.223)
O4': (60.975,-4.598,139.620)
C5': (58.606,-4.586,139.162)
P: (57.261,-6.821,139.535)
C4': (59.953,-4.054,138.741)
C2': (61.249,-5.647,137.557)
O2': (62.152,-5.954,136.521)
N1: (62.442,-6.416,139.641)
O4: (63.607,-9.603,141.718)
O2: (64.725,-6.193,139.153)
C6: (61.509,-7.150,140.287)
C5: (61.843,-8.218,140.992)
O3': (61.165,-3.344,136.789)
N3: (64.098,-7.854,140.428)
OP1: (57.449,-8.254,139.202)
OP2: (56.749,-6.447,140.892)
C2: (63.802,-6.757,139.700)
C1': (61.954,-5.264,138.856)
C3': (60.379,-4.413,137.325)
O5': (58.597,-6.012,139.223)
O4': (60.975,-4.598,139.620)
C5': (58.606,-4.586,139.162)
P: (57.261,-6.821,139.535)
C4': (59.953,-4.054,138.741)
C2': (61.249,-5.647,137.557)
O2': (62.152,-5.954,136.521)
N1: (62.442,-6.416,139.641)
O4: (63.607,-9.603,141.718)
O2: (64.725,-6.193,139.153)
C6: (61.509,-7.150,140.287)
C5: (61.843,-8.218,140.992)
O3': (61.165,-3.344,136.789)
OP1: (61.425,-1.252,135.494)
OP2: (59.841,-1.320,137.445)
C3': (58.529,-1.111,132.963)
C1': (56.480,-1.824,133.917)
C5': (59.573,-3.084,134.101)
O6: (52.635,-2.496,138.496)
O4': (57.248,-2.979,133.695)
C8: (56.353,-1.829,136.406)
C2: (52.265,-2.615,135.040)
C6: (53.020,-2.436,137.330)
C5: (54.303,-2.208,136.772)
C4: (54.423,-2.220,135.386)
P: (60.449,-1.983,136.289)
C4': (58.546,-2.621,133.145)
C2': (57.451,-0.659,133.934)
O2': (56.812,0.530,133.571)
N1: (52.065,-2.630,136.367)
N2: (51.107,-2.853,134.409)
N3: (53.452,-2.408,134.457)
N7: (55.529,-1.979,137.398)
N9: (55.764,-1.982,135.173)
O5': (59.305,-2.523,135.368)
O3': (58.168,-0.778,131.622)
OP2: (59.841,-1.320,137.445)
C3': (58.529,-1.111,132.963)
C1': (56.480,-1.824,133.917)
C5': (59.573,-3.084,134.101)
O6: (52.635,-2.496,138.496)
O4': (57.248,-2.979,133.695)
C8: (56.353,-1.829,136.406)
C2: (52.265,-2.615,135.040)
C6: (53.020,-2.436,137.330)
C5: (54.303,-2.208,136.772)
C4: (54.423,-2.220,135.386)
P: (60.449,-1.983,136.289)
C4': (58.546,-2.621,133.145)
C2': (57.451,-0.659,133.934)
O2': (56.812,0.530,133.571)
N1: (52.065,-2.630,136.367)
N2: (51.107,-2.853,134.409)
N3: (53.452,-2.408,134.457)
N7: (55.529,-1.979,137.398)
N9: (55.764,-1.982,135.173)
O5': (59.305,-2.523,135.368)
O3': (58.168,-0.778,131.622)
Image (generated by PyMOL):