Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.876 79.867 68.033 1.00 64.11 O
ATOM 2 P C A1234 5.327 80.009 66.508 1.00 64.51 P
ATOM 3 OP1 C A1234 4.922 78.809 65.748 1.00 64.47 O
ATOM 4 OP2 C A1234 6.752 80.409 66.539 1.00 67.09 O
ATOM 5 O5' C A1234 4.476 81.247 65.997 1.00 62.32 O
ATOM 6 C5' C A1234 3.061 81.226 66.097 1.00 62.40 C
ATOM 7 C4' C A1234 2.501 82.575 65.765 1.00 62.96 C
ATOM 8 O4' C A1234 2.882 83.524 66.782 1.00 62.35 O
ATOM 9 C3' C A1234 3.035 83.199 64.502 1.00 63.33 C
ATOM 10 O3' C A1234 2.407 82.679 63.363 1.00 68.86 O
ATOM 11 C2' C A1234 2.688 84.656 64.712 1.00 62.20 C
ATOM 12 O2' C A1234 1.323 84.896 64.463 1.00 60.38 O
ATOM 13 C1' C A1234 2.994 84.809 66.202 1.00 62.52 C
ATOM 14 N1 C A1234 4.357 85.292 66.434 1.00 62.97 N
ATOM 15 C2 C A1234 4.595 86.664 66.407 1.00 63.62 C
ATOM 16 O2 C A1234 3.647 87.439 66.220 1.00 63.86 O
ATOM 17 N3 C A1234 5.846 87.117 66.585 1.00 65.05 N
ATOM 18 C4 C A1234 6.841 86.260 66.791 1.00 65.90 C
ATOM 19 N4 C A1234 8.070 86.765 66.952 1.00 67.70 N
ATOM 20 C5 C A1234 6.626 84.852 66.840 1.00 64.84 C
ATOM 21 C6 C A1234 5.379 84.417 66.660 1.00 62.87 C
ATOM 22 P U A1235 3.272 82.446 62.044 1.00 73.97 P
ATOM 23 OP1 U A1235 2.327 82.031 60.984 1.00 76.05 O
ATOM 24 OP2 U A1235 4.420 81.572 62.391 1.00 73.01 O
ATOM 25 O5' U A1235 3.812 83.904 61.697 1.00 75.54 O
TER
ATOM 1 O3' A B1239 8.045 98.339 66.255 1.00115.83 O
ATOM 2 P C B1240 7.384 98.101 67.702 1.00114.93 P
ATOM 3 OP1 C B1240 7.137 99.426 68.325 1.00115.14 O
ATOM 4 OP2 C B1240 8.173 97.076 68.436 1.00115.43 O
ATOM 5 O5' C B1240 5.966 97.467 67.378 1.00112.61 O
ATOM 6 C5' C B1240 5.234 96.796 68.398 1.00107.98 C
ATOM 7 C4' C B1240 3.858 96.447 67.906 1.00105.78 C
ATOM 8 O4' C B1240 3.933 95.513 66.802 1.00105.71 O
ATOM 9 C3' C B1240 3.045 95.725 68.953 1.00104.19 C
ATOM 10 O3' C B1240 2.475 96.690 69.813 1.00101.06 O
ATOM 11 C2' C B1240 2.032 94.945 68.125 1.00104.71 C
ATOM 12 O2' C B1240 0.925 95.725 67.718 1.00104.34 O
ATOM 13 C1' C B1240 2.876 94.570 66.903 1.00105.25 C
ATOM 14 N1 C B1240 3.475 93.227 66.945 1.00105.04 N
ATOM 15 C2 C B1240 2.739 92.138 66.463 1.00105.56 C
ATOM 16 O2 C B1240 1.575 92.324 66.062 1.00105.93 O
ATOM 17 N3 C B1240 3.312 90.912 66.450 1.00105.40 N
ATOM 18 C4 C B1240 4.557 90.753 66.904 1.00104.49 C
ATOM 19 N4 C B1240 5.088 89.535 66.861 1.00103.99 N
ATOM 20 C5 C B1240 5.314 91.839 67.422 1.00104.13 C
ATOM 21 C6 C B1240 4.740 93.046 67.425 1.00104.37 C
ATOM 22 P U B1241 2.662 96.542 71.390 1.00 98.14 P
ATOM 23 OP1 U B1241 2.075 97.761 71.988 1.00 98.61 O
ATOM 24 OP2 U B1241 4.080 96.203 71.670 1.00 98.28 O
ATOM 25 O5' U B1241 1.739 95.285 71.712 1.00 96.44 O
TER
ATOM 2 P C A1234 5.327 80.009 66.508 1.00 64.51 P
ATOM 3 OP1 C A1234 4.922 78.809 65.748 1.00 64.47 O
ATOM 4 OP2 C A1234 6.752 80.409 66.539 1.00 67.09 O
ATOM 5 O5' C A1234 4.476 81.247 65.997 1.00 62.32 O
ATOM 6 C5' C A1234 3.061 81.226 66.097 1.00 62.40 C
ATOM 7 C4' C A1234 2.501 82.575 65.765 1.00 62.96 C
ATOM 8 O4' C A1234 2.882 83.524 66.782 1.00 62.35 O
ATOM 9 C3' C A1234 3.035 83.199 64.502 1.00 63.33 C
ATOM 10 O3' C A1234 2.407 82.679 63.363 1.00 68.86 O
ATOM 11 C2' C A1234 2.688 84.656 64.712 1.00 62.20 C
ATOM 12 O2' C A1234 1.323 84.896 64.463 1.00 60.38 O
ATOM 13 C1' C A1234 2.994 84.809 66.202 1.00 62.52 C
ATOM 14 N1 C A1234 4.357 85.292 66.434 1.00 62.97 N
ATOM 15 C2 C A1234 4.595 86.664 66.407 1.00 63.62 C
ATOM 16 O2 C A1234 3.647 87.439 66.220 1.00 63.86 O
ATOM 17 N3 C A1234 5.846 87.117 66.585 1.00 65.05 N
ATOM 18 C4 C A1234 6.841 86.260 66.791 1.00 65.90 C
ATOM 19 N4 C A1234 8.070 86.765 66.952 1.00 67.70 N
ATOM 20 C5 C A1234 6.626 84.852 66.840 1.00 64.84 C
ATOM 21 C6 C A1234 5.379 84.417 66.660 1.00 62.87 C
ATOM 22 P U A1235 3.272 82.446 62.044 1.00 73.97 P
ATOM 23 OP1 U A1235 2.327 82.031 60.984 1.00 76.05 O
ATOM 24 OP2 U A1235 4.420 81.572 62.391 1.00 73.01 O
ATOM 25 O5' U A1235 3.812 83.904 61.697 1.00 75.54 O
TER
ATOM 1 O3' A B1239 8.045 98.339 66.255 1.00115.83 O
ATOM 2 P C B1240 7.384 98.101 67.702 1.00114.93 P
ATOM 3 OP1 C B1240 7.137 99.426 68.325 1.00115.14 O
ATOM 4 OP2 C B1240 8.173 97.076 68.436 1.00115.43 O
ATOM 5 O5' C B1240 5.966 97.467 67.378 1.00112.61 O
ATOM 6 C5' C B1240 5.234 96.796 68.398 1.00107.98 C
ATOM 7 C4' C B1240 3.858 96.447 67.906 1.00105.78 C
ATOM 8 O4' C B1240 3.933 95.513 66.802 1.00105.71 O
ATOM 9 C3' C B1240 3.045 95.725 68.953 1.00104.19 C
ATOM 10 O3' C B1240 2.475 96.690 69.813 1.00101.06 O
ATOM 11 C2' C B1240 2.032 94.945 68.125 1.00104.71 C
ATOM 12 O2' C B1240 0.925 95.725 67.718 1.00104.34 O
ATOM 13 C1' C B1240 2.876 94.570 66.903 1.00105.25 C
ATOM 14 N1 C B1240 3.475 93.227 66.945 1.00105.04 N
ATOM 15 C2 C B1240 2.739 92.138 66.463 1.00105.56 C
ATOM 16 O2 C B1240 1.575 92.324 66.062 1.00105.93 O
ATOM 17 N3 C B1240 3.312 90.912 66.450 1.00105.40 N
ATOM 18 C4 C B1240 4.557 90.753 66.904 1.00104.49 C
ATOM 19 N4 C B1240 5.088 89.535 66.861 1.00103.99 N
ATOM 20 C5 C B1240 5.314 91.839 67.422 1.00104.13 C
ATOM 21 C6 C B1240 4.740 93.046 67.425 1.00104.37 C
ATOM 22 P U B1241 2.662 96.542 71.390 1.00 98.14 P
ATOM 23 OP1 U B1241 2.075 97.761 71.988 1.00 98.61 O
ATOM 24 OP2 U B1241 4.080 96.203 71.670 1.00 98.28 O
ATOM 25 O5' U B1241 1.739 95.285 71.712 1.00 96.44 O
TER
Atoms:
C2: (4.595,86.664,66.407)
OP1: (4.922,78.809,65.748)
OP2: (6.752,80.409,66.539)
C4: (6.841,86.260,66.791)
O5': (4.476,81.247,65.997)
C3': (3.035,83.199,64.502)
C1': (2.994,84.809,66.202)
O4': (2.882,83.524,66.782)
C5': (3.061,81.226,66.097)
P: (5.327,80.009,66.508)
O2: (3.647,87.439,66.220)
C4': (2.501,82.575,65.765)
C2': (2.688,84.656,64.712)
O2': (1.323,84.896,64.463)
N1: (4.357,85.292,66.434)
N3: (5.846,87.117,66.585)
N4: (8.070,86.765,66.952)
C6: (5.379,84.417,66.660)
C5: (6.626,84.852,66.840)
O3': (2.407,82.679,63.363)
OP1: (4.922,78.809,65.748)
OP2: (6.752,80.409,66.539)
C4: (6.841,86.260,66.791)
O5': (4.476,81.247,65.997)
C3': (3.035,83.199,64.502)
C1': (2.994,84.809,66.202)
O4': (2.882,83.524,66.782)
C5': (3.061,81.226,66.097)
P: (5.327,80.009,66.508)
O2: (3.647,87.439,66.220)
C4': (2.501,82.575,65.765)
C2': (2.688,84.656,64.712)
O2': (1.323,84.896,64.463)
N1: (4.357,85.292,66.434)
N3: (5.846,87.117,66.585)
N4: (8.070,86.765,66.952)
C6: (5.379,84.417,66.660)
C5: (6.626,84.852,66.840)
O3': (2.407,82.679,63.363)
C2: (2.739,92.138,66.463)
OP1: (7.137,99.426,68.325)
OP2: (8.173,97.076,68.436)
C4: (4.557,90.753,66.904)
O5': (5.966,97.467,67.378)
C3': (3.045,95.725,68.953)
C1': (2.876,94.570,66.903)
O4': (3.933,95.513,66.802)
C5': (5.234,96.796,68.398)
P: (7.384,98.101,67.702)
O2: (1.575,92.324,66.062)
C4': (3.858,96.447,67.906)
C2': (2.032,94.945,68.125)
O2': (0.925,95.725,67.718)
N1: (3.475,93.227,66.945)
N3: (3.312,90.912,66.450)
N4: (5.088,89.535,66.861)
C6: (4.740,93.046,67.425)
C5: (5.314,91.839,67.422)
O3': (2.475,96.690,69.813)
OP1: (7.137,99.426,68.325)
OP2: (8.173,97.076,68.436)
C4: (4.557,90.753,66.904)
O5': (5.966,97.467,67.378)
C3': (3.045,95.725,68.953)
C1': (2.876,94.570,66.903)
O4': (3.933,95.513,66.802)
C5': (5.234,96.796,68.398)
P: (7.384,98.101,67.702)
O2: (1.575,92.324,66.062)
C4': (3.858,96.447,67.906)
C2': (2.032,94.945,68.125)
O2': (0.925,95.725,67.718)
N1: (3.475,93.227,66.945)
N3: (3.312,90.912,66.450)
N4: (5.088,89.535,66.861)
C6: (4.740,93.046,67.425)
C5: (5.314,91.839,67.422)
O3': (2.475,96.690,69.813)
Image (generated by PyMOL):