ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01040:01028

Extra

PDB:
ATOM 1 O3' C A1039 37.470 105.952 103.556 1.00 59.33 O
ATOM 2 P A A1040 38.356 106.646 102.412 1.00 61.00 P
ATOM 3 OP1 A A1040 39.653 107.064 103.007 1.00 59.29 O
ATOM 4 OP2 A A1040 37.510 107.639 101.709 1.00 59.22 O
ATOM 5 O5' A A1040 38.669 105.440 101.420 1.00 54.06 O
ATOM 6 C5' A A1040 38.950 104.131 101.929 1.00 44.48 C
ATOM 7 C4' A A1040 38.910 103.131 100.807 1.00 42.41 C
ATOM 8 O4' A A1040 39.941 103.457 99.841 1.00 37.42 O
ATOM 9 C3' A A1040 39.202 101.695 101.198 1.00 39.77 C
ATOM 10 O3' A A1040 38.005 101.089 101.683 1.00 42.25 O
ATOM 11 C2' A A1040 39.649 101.094 99.868 1.00 40.56 C
ATOM 12 O2' A A1040 38.568 100.798 99.010 1.00 43.86 O
ATOM 13 C1' A A1040 40.406 102.270 99.237 1.00 38.17 C
ATOM 14 N9 A A1040 41.863 102.231 99.355 1.00 35.55 N
ATOM 15 C8 A A1040 42.646 102.820 100.310 1.00 33.71 C
ATOM 16 N7 A A1040 43.928 102.640 100.125 1.00 35.30 N
ATOM 17 C5 A A1040 43.993 101.867 98.974 1.00 34.81 C
ATOM 18 C6 A A1040 45.074 101.327 98.260 1.00 34.44 C
ATOM 19 N6 A A1040 46.354 101.513 98.601 1.00 32.12 N
ATOM 20 N1 A A1040 44.793 100.579 97.166 1.00 36.71 N
ATOM 21 C2 A A1040 43.515 100.409 96.822 1.00 34.48 C
ATOM 22 N3 A A1040 42.417 100.877 97.410 1.00 34.34 N
ATOM 23 C4 A A1040 42.730 101.603 98.495 1.00 32.63 C
ATOM 24 P A A1041 37.850 100.723 103.252 1.00 39.38 P
ATOM 25 OP1 A A1041 36.452 101.053 103.607 1.00 38.97 O
ATOM 26 OP2 A A1041 38.957 101.297 104.052 1.00 38.72 O
ATOM 27 O5' A A1041 38.023 99.142 103.259 1.00 39.85 O
TER

ATOM 1 O3' C B1027 35.499 94.247 97.351 1.00 32.23 O
ATOM 2 P C B1028 35.378 95.219 96.088 1.00 32.74 P
ATOM 3 OP1 C B1028 34.133 96.001 96.252 1.00 31.57 O
ATOM 4 OP2 C B1028 35.576 94.388 94.882 1.00 31.73 O
ATOM 5 O5' C B1028 36.609 96.213 96.245 1.00 31.22 O
ATOM 6 C5' C B1028 36.626 97.194 97.296 1.00 33.85 C
ATOM 7 C4' C B1028 37.903 98.002 97.243 1.00 34.42 C
ATOM 8 O4' C B1028 39.040 97.160 97.575 1.00 33.71 O
ATOM 9 C3' C B1028 38.254 98.569 95.876 1.00 31.63 C
ATOM 10 O3' C B1028 37.553 99.775 95.606 1.00 32.93 O
ATOM 11 C2' C B1028 39.745 98.800 96.011 1.00 33.31 C
ATOM 12 O2' C B1028 40.008 99.951 96.791 1.00 35.20 O
ATOM 13 C1' C B1028 40.162 97.556 96.794 1.00 34.12 C
ATOM 14 N1 C B1028 40.551 96.423 95.929 1.00 33.45 N
ATOM 15 C2 C B1028 41.851 96.372 95.421 1.00 31.37 C
ATOM 16 O2 C B1028 42.626 97.316 95.643 1.00 33.99 O
ATOM 17 N3 C B1028 42.232 95.301 94.689 1.00 32.74 N
ATOM 18 C4 C B1028 41.363 94.321 94.432 1.00 32.80 C
ATOM 19 N4 C B1028 41.784 93.285 93.699 1.00 27.06 N
ATOM 20 C5 C B1028 40.026 94.360 94.911 1.00 32.93 C
ATOM 21 C6 C B1028 39.663 95.421 95.646 1.00 33.22 C
ATOM 22 P A B1029 37.243 100.190 94.083 1.00 32.18 P
ATOM 23 OP1 A B1029 36.701 101.565 94.134 1.00 33.59 O
ATOM 24 OP2 A B1029 36.444 99.112 93.449 1.00 32.72 O
ATOM 25 O5' A B1029 38.672 100.186 93.367 1.00 32.96 O
TER

Atoms:
OP1: (39.653,107.064,103.007)
OP2: (37.510,107.639,101.709)
C3': (39.202,101.695,101.198)
C1': (40.406,102.270,99.237)
C5': (38.950,104.131,101.929)
O4': (39.941,103.457,99.841)
C8: (42.646,102.820,100.310)
O2': (38.568,100.798,99.010)
C6: (45.074,101.327,98.260)
C5: (43.993,101.867,98.974)
C4: (42.730,101.603,98.495)
P: (38.356,106.646,102.412)
C4': (38.910,103.131,100.807)
C2': (39.649,101.094,99.868)
C2: (43.515,100.409,96.822)
N1: (44.793,100.579,97.166)
N3: (42.417,100.877,97.410)
N6: (46.354,101.513,98.601)
N7: (43.928,102.640,100.125)
N9: (41.863,102.231,99.355)
O5': (38.669,105.440,101.420)
O3': (38.005,101.089,101.683)
C2: (41.851,96.372,95.421)
OP1: (34.133,96.001,96.252)
OP2: (35.576,94.388,94.882)
C4: (41.363,94.321,94.432)
O5': (36.609,96.213,96.245)
C3': (38.254,98.569,95.876)
C1': (40.162,97.556,96.794)
O4': (39.040,97.160,97.575)
C5': (36.626,97.194,97.296)
P: (35.378,95.219,96.088)
O2: (42.626,97.316,95.643)
C4': (37.903,98.002,97.243)
C2': (39.745,98.800,96.011)
O2': (40.008,99.951,96.791)
N1: (40.551,96.423,95.929)
N3: (42.232,95.301,94.689)
N4: (41.784,93.285,93.699)
C6: (39.663,95.421,95.646)
C5: (40.026,94.360,94.911)
O3': (37.553,99.775,95.606)
Image (generated by PyMOL):
PyMOL image
show in jmol