Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01056:01044
Extra
PDB:
ATOM 1 O3' U A1055 15.694 92.447 111.099 1.00 35.64 O
ATOM 2 P A A1056 17.068 92.711 111.872 1.00 36.11 P
ATOM 3 OP1 A A1056 17.383 91.487 112.639 1.00 37.93 O
ATOM 4 OP2 A A1056 16.945 94.015 112.567 1.00 31.81 O
ATOM 5 O5' A A1056 18.148 92.854 110.713 1.00 35.59 O
ATOM 6 C5' A A1056 18.585 91.710 109.962 1.00 36.83 C
ATOM 7 C4' A A1056 19.835 92.049 109.184 1.00 38.25 C
ATOM 8 O4' A A1056 19.526 93.041 108.170 1.00 37.74 O
ATOM 9 C3' A A1056 20.956 92.687 109.996 1.00 36.83 C
ATOM 10 O3' A A1056 21.723 91.698 110.681 1.00 34.72 O
ATOM 11 C2' A A1056 21.762 93.403 108.920 1.00 36.58 C
ATOM 12 O2' A A1056 22.600 92.519 108.208 1.00 36.54 O
ATOM 13 C1' A A1056 20.657 93.871 107.967 1.00 37.51 C
ATOM 14 N9 A A1056 20.253 95.276 108.093 1.00 37.16 N
ATOM 15 C8 A A1056 19.133 95.798 108.690 1.00 37.56 C
ATOM 16 N7 A A1056 19.040 97.102 108.592 1.00 36.75 N
ATOM 17 C5 A A1056 20.180 97.467 107.893 1.00 36.53 C
ATOM 18 C6 A A1056 20.665 98.714 107.451 1.00 36.35 C
ATOM 19 N6 A A1056 20.035 99.873 107.653 1.00 35.25 N
ATOM 20 N1 A A1056 21.836 98.729 106.780 1.00 36.41 N
ATOM 21 C2 A A1056 22.467 97.568 106.565 1.00 36.58 C
ATOM 22 N3 A A1056 22.112 96.337 106.921 1.00 36.03 N
ATOM 23 C4 A A1056 20.944 96.355 107.590 1.00 37.30 C
ATOM 24 P A A1057 22.332 92.018 112.129 1.00 34.44 P
ATOM 25 OP1 A A1057 22.933 90.763 112.627 1.00 32.21 O
ATOM 26 OP2 A A1057 21.301 92.713 112.938 1.00 33.51 O
ATOM 27 O5' A A1057 23.506 93.051 111.841 1.00 35.09 O
TER
ATOM 1 O3' C B1043 30.164 91.862 108.640 1.00 30.67 O
ATOM 2 P C B1044 29.589 91.174 107.309 1.00 32.58 P
ATOM 3 OP1 C B1044 29.176 89.794 107.683 1.00 30.70 O
ATOM 4 OP2 C B1044 30.550 91.374 106.207 1.00 31.38 O
ATOM 5 O5' C B1044 28.281 92.016 106.972 1.00 33.19 O
ATOM 6 C5' C B1044 27.157 92.000 107.860 1.00 33.05 C
ATOM 7 C4' C B1044 26.093 92.952 107.378 1.00 34.32 C
ATOM 8 O4' C B1044 26.550 94.324 107.499 1.00 35.54 O
ATOM 9 C3' C B1044 25.690 92.840 105.919 1.00 32.72 C
ATOM 10 O3' C B1044 24.788 91.778 105.691 1.00 32.88 O
ATOM 11 C2' C B1044 25.022 94.181 105.688 1.00 34.35 C
ATOM 12 O2' C B1044 23.722 94.218 106.241 1.00 31.47 O
ATOM 13 C1' C B1044 25.951 95.108 106.478 1.00 36.36 C
ATOM 14 N1 C B1044 27.012 95.690 105.627 1.00 40.31 N
ATOM 15 C2 C B1044 26.683 96.765 104.794 1.00 40.66 C
ATOM 16 O2 C B1044 25.523 97.197 104.805 1.00 41.08 O
ATOM 17 N3 C B1044 27.635 97.306 104.000 1.00 41.53 N
ATOM 18 C4 C B1044 28.876 96.815 104.016 1.00 41.44 C
ATOM 19 N4 C B1044 29.779 97.382 103.209 1.00 39.95 N
ATOM 20 C5 C B1044 29.245 95.723 104.856 1.00 40.77 C
ATOM 21 C6 C B1044 28.292 95.196 105.637 1.00 41.42 C
ATOM 22 P A B1045 24.874 90.946 104.324 1.00 34.25 P
ATOM 23 OP1 A B1045 23.758 89.969 104.280 1.00 35.20 O
ATOM 24 OP2 A B1045 26.268 90.458 104.184 1.00 35.15 O
ATOM 25 O5' A B1045 24.649 92.049 103.204 1.00 34.01 O
TER
ATOM 2 P A A1056 17.068 92.711 111.872 1.00 36.11 P
ATOM 3 OP1 A A1056 17.383 91.487 112.639 1.00 37.93 O
ATOM 4 OP2 A A1056 16.945 94.015 112.567 1.00 31.81 O
ATOM 5 O5' A A1056 18.148 92.854 110.713 1.00 35.59 O
ATOM 6 C5' A A1056 18.585 91.710 109.962 1.00 36.83 C
ATOM 7 C4' A A1056 19.835 92.049 109.184 1.00 38.25 C
ATOM 8 O4' A A1056 19.526 93.041 108.170 1.00 37.74 O
ATOM 9 C3' A A1056 20.956 92.687 109.996 1.00 36.83 C
ATOM 10 O3' A A1056 21.723 91.698 110.681 1.00 34.72 O
ATOM 11 C2' A A1056 21.762 93.403 108.920 1.00 36.58 C
ATOM 12 O2' A A1056 22.600 92.519 108.208 1.00 36.54 O
ATOM 13 C1' A A1056 20.657 93.871 107.967 1.00 37.51 C
ATOM 14 N9 A A1056 20.253 95.276 108.093 1.00 37.16 N
ATOM 15 C8 A A1056 19.133 95.798 108.690 1.00 37.56 C
ATOM 16 N7 A A1056 19.040 97.102 108.592 1.00 36.75 N
ATOM 17 C5 A A1056 20.180 97.467 107.893 1.00 36.53 C
ATOM 18 C6 A A1056 20.665 98.714 107.451 1.00 36.35 C
ATOM 19 N6 A A1056 20.035 99.873 107.653 1.00 35.25 N
ATOM 20 N1 A A1056 21.836 98.729 106.780 1.00 36.41 N
ATOM 21 C2 A A1056 22.467 97.568 106.565 1.00 36.58 C
ATOM 22 N3 A A1056 22.112 96.337 106.921 1.00 36.03 N
ATOM 23 C4 A A1056 20.944 96.355 107.590 1.00 37.30 C
ATOM 24 P A A1057 22.332 92.018 112.129 1.00 34.44 P
ATOM 25 OP1 A A1057 22.933 90.763 112.627 1.00 32.21 O
ATOM 26 OP2 A A1057 21.301 92.713 112.938 1.00 33.51 O
ATOM 27 O5' A A1057 23.506 93.051 111.841 1.00 35.09 O
TER
ATOM 1 O3' C B1043 30.164 91.862 108.640 1.00 30.67 O
ATOM 2 P C B1044 29.589 91.174 107.309 1.00 32.58 P
ATOM 3 OP1 C B1044 29.176 89.794 107.683 1.00 30.70 O
ATOM 4 OP2 C B1044 30.550 91.374 106.207 1.00 31.38 O
ATOM 5 O5' C B1044 28.281 92.016 106.972 1.00 33.19 O
ATOM 6 C5' C B1044 27.157 92.000 107.860 1.00 33.05 C
ATOM 7 C4' C B1044 26.093 92.952 107.378 1.00 34.32 C
ATOM 8 O4' C B1044 26.550 94.324 107.499 1.00 35.54 O
ATOM 9 C3' C B1044 25.690 92.840 105.919 1.00 32.72 C
ATOM 10 O3' C B1044 24.788 91.778 105.691 1.00 32.88 O
ATOM 11 C2' C B1044 25.022 94.181 105.688 1.00 34.35 C
ATOM 12 O2' C B1044 23.722 94.218 106.241 1.00 31.47 O
ATOM 13 C1' C B1044 25.951 95.108 106.478 1.00 36.36 C
ATOM 14 N1 C B1044 27.012 95.690 105.627 1.00 40.31 N
ATOM 15 C2 C B1044 26.683 96.765 104.794 1.00 40.66 C
ATOM 16 O2 C B1044 25.523 97.197 104.805 1.00 41.08 O
ATOM 17 N3 C B1044 27.635 97.306 104.000 1.00 41.53 N
ATOM 18 C4 C B1044 28.876 96.815 104.016 1.00 41.44 C
ATOM 19 N4 C B1044 29.779 97.382 103.209 1.00 39.95 N
ATOM 20 C5 C B1044 29.245 95.723 104.856 1.00 40.77 C
ATOM 21 C6 C B1044 28.292 95.196 105.637 1.00 41.42 C
ATOM 22 P A B1045 24.874 90.946 104.324 1.00 34.25 P
ATOM 23 OP1 A B1045 23.758 89.969 104.280 1.00 35.20 O
ATOM 24 OP2 A B1045 26.268 90.458 104.184 1.00 35.15 O
ATOM 25 O5' A B1045 24.649 92.049 103.204 1.00 34.01 O
TER
Atoms:
OP1: (17.383,91.487,112.639)
OP2: (16.945,94.015,112.567)
C3': (20.956,92.687,109.996)
C1': (20.657,93.871,107.967)
C5': (18.585,91.710,109.962)
O4': (19.526,93.041,108.170)
C8: (19.133,95.798,108.690)
O2': (22.600,92.519,108.208)
C6: (20.665,98.714,107.451)
C5: (20.180,97.467,107.893)
C4: (20.944,96.355,107.590)
P: (17.068,92.711,111.872)
C4': (19.835,92.049,109.184)
C2': (21.762,93.403,108.920)
C2: (22.467,97.568,106.565)
N1: (21.836,98.729,106.780)
N3: (22.112,96.337,106.921)
N6: (20.035,99.873,107.653)
N7: (19.040,97.102,108.592)
N9: (20.253,95.276,108.093)
O5': (18.148,92.854,110.713)
O3': (21.723,91.698,110.681)
OP2: (16.945,94.015,112.567)
C3': (20.956,92.687,109.996)
C1': (20.657,93.871,107.967)
C5': (18.585,91.710,109.962)
O4': (19.526,93.041,108.170)
C8: (19.133,95.798,108.690)
O2': (22.600,92.519,108.208)
C6: (20.665,98.714,107.451)
C5: (20.180,97.467,107.893)
C4: (20.944,96.355,107.590)
P: (17.068,92.711,111.872)
C4': (19.835,92.049,109.184)
C2': (21.762,93.403,108.920)
C2: (22.467,97.568,106.565)
N1: (21.836,98.729,106.780)
N3: (22.112,96.337,106.921)
N6: (20.035,99.873,107.653)
N7: (19.040,97.102,108.592)
N9: (20.253,95.276,108.093)
O5': (18.148,92.854,110.713)
O3': (21.723,91.698,110.681)
C2: (26.683,96.765,104.794)
OP1: (29.176,89.794,107.683)
OP2: (30.550,91.374,106.207)
C4: (28.876,96.815,104.016)
O5': (28.281,92.016,106.972)
C3': (25.690,92.840,105.919)
C1': (25.951,95.108,106.478)
O4': (26.550,94.324,107.499)
C5': (27.157,92.000,107.860)
P: (29.589,91.174,107.309)
O2: (25.523,97.197,104.805)
C4': (26.093,92.952,107.378)
C2': (25.022,94.181,105.688)
O2': (23.722,94.218,106.241)
N1: (27.012,95.690,105.627)
N3: (27.635,97.306,104.000)
N4: (29.779,97.382,103.209)
C6: (28.292,95.196,105.637)
C5: (29.245,95.723,104.856)
O3': (24.788,91.778,105.691)
OP1: (29.176,89.794,107.683)
OP2: (30.550,91.374,106.207)
C4: (28.876,96.815,104.016)
O5': (28.281,92.016,106.972)
C3': (25.690,92.840,105.919)
C1': (25.951,95.108,106.478)
O4': (26.550,94.324,107.499)
C5': (27.157,92.000,107.860)
P: (29.589,91.174,107.309)
O2: (25.523,97.197,104.805)
C4': (26.093,92.952,107.378)
C2': (25.022,94.181,105.688)
O2': (23.722,94.218,106.241)
N1: (27.012,95.690,105.627)
N3: (27.635,97.306,104.000)
N4: (29.779,97.382,103.209)
C6: (28.292,95.196,105.637)
C5: (29.245,95.723,104.856)
O3': (24.788,91.778,105.691)
Image (generated by PyMOL):