ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A1745:A1746

Extra

PDB:
ATOM 1 O3' A A1744 56.949 0.565 -29.142 1.00 27.95 O
ATOM 2 P U A1745 57.406 -0.135 -27.775 1.00 38.50 P
ATOM 3 OP1 U A1745 57.752 0.947 -26.826 1.00 57.42 O
ATOM 4 OP2 U A1745 58.442 -1.111 -28.133 1.00 50.27 O
ATOM 5 O5' U A1745 56.087 -0.866 -27.247 1.00 41.68 O
ATOM 6 C5' U A1745 56.194 -2.119 -26.573 1.00 39.76 C
ATOM 7 C4' U A1745 55.098 -2.340 -25.566 1.00 39.20 C
ATOM 8 O4' U A1745 54.939 -1.157 -24.748 1.00 41.68 O
ATOM 9 C3' U A1745 53.730 -2.638 -26.150 1.00 43.38 C
ATOM 10 O3' U A1745 53.071 -3.565 -25.302 1.00 40.16 O
ATOM 11 C2' U A1745 53.039 -1.289 -26.077 1.00 41.79 C
ATOM 12 O2' U A1745 51.632 -1.346 -26.059 1.00 50.06 O
ATOM 13 C1' U A1745 53.591 -0.756 -24.773 1.00 38.52 C
ATOM 14 N1 U A1745 53.544 0.688 -24.666 1.00 43.87 N
ATOM 15 C2 U A1745 52.635 1.154 -23.763 1.00 36.36 C
ATOM 16 O2 U A1745 51.945 0.412 -23.122 1.00 35.85 O
ATOM 17 N3 U A1745 52.572 2.501 -23.639 1.00 35.57 N
ATOM 18 C4 U A1745 53.339 3.392 -24.337 1.00 37.45 C
ATOM 19 O4 U A1745 53.178 4.590 -24.117 1.00 53.53 O
ATOM 20 C5 U A1745 54.272 2.816 -25.276 1.00 46.71 C
ATOM 21 C6 U A1745 54.355 1.493 -25.432 1.00 45.07 C
ATOM 22 P A A1746 53.532 -5.102 -25.330 1.00 54.04 P
ATOM 23 OP1 A A1746 52.349 -5.926 -24.878 1.00 37.39 O
ATOM 24 OP2 A A1746 54.794 -5.190 -24.573 1.00 39.38 O
ATOM 25 O5' A A1746 53.810 -5.339 -26.881 1.00 30.29 O
TER

ATOM 1 O3' U B1745 53.071 -3.565 -25.302 1.00 40.16 O
ATOM 2 P A B1746 53.532 -5.102 -25.330 1.00 54.04 P
ATOM 3 OP1 A B1746 52.349 -5.926 -24.878 1.00 37.39 O
ATOM 4 OP2 A B1746 54.794 -5.190 -24.573 1.00 39.38 O
ATOM 5 O5' A B1746 53.810 -5.339 -26.881 1.00 30.29 O
ATOM 6 C5' A B1746 52.743 -5.212 -27.803 1.00 38.02 C
ATOM 7 C4' A B1746 52.975 -6.027 -29.029 1.00 35.42 C
ATOM 8 O4' A B1746 53.782 -5.269 -29.958 1.00 38.06 O
ATOM 9 C3' A B1746 53.740 -7.317 -28.825 1.00 37.30 C
ATOM 10 O3' A B1746 52.905 -8.391 -28.432 1.00 36.73 O
ATOM 11 C2' A B1746 54.397 -7.522 -30.181 1.00 35.25 C
ATOM 12 O2' A B1746 53.436 -7.975 -31.132 1.00 33.41 O
ATOM 13 C1' A B1746 54.761 -6.090 -30.535 1.00 35.86 C
ATOM 14 N9 A B1746 56.065 -5.673 -29.985 1.00 31.56 N
ATOM 15 C8 A B1746 56.254 -5.146 -28.731 1.00 35.64 C
ATOM 16 N7 A B1746 57.501 -4.804 -28.484 1.00 32.71 N
ATOM 17 C5 A B1746 58.158 -5.097 -29.651 1.00 27.41 C
ATOM 18 C6 A B1746 59.496 -4.951 -30.008 1.00 33.59 C
ATOM 19 N6 A B1746 60.411 -4.456 -29.183 1.00 39.16 N
ATOM 20 N1 A B1746 59.869 -5.327 -31.240 1.00 28.88 N
ATOM 21 C2 A B1746 58.914 -5.814 -32.038 1.00 37.71 C
ATOM 22 N3 A B1746 57.611 -5.999 -31.816 1.00 37.92 N
ATOM 23 C4 A B1746 57.291 -5.610 -30.587 1.00 26.77 C
ATOM 24 P G B1747 53.538 -9.710 -27.753 1.00 43.18 P
ATOM 25 OP1 G B1747 52.423 -10.672 -27.580 1.00 40.40 O
ATOM 26 OP2 G B1747 54.271 -9.267 -26.546 1.00 37.07 O
ATOM 27 O5' G B1747 54.580 -10.256 -28.873 1.00 23.27 O
TER

Atoms:
C4: (53.339,3.392,-24.337)
N3: (52.572,2.501,-23.639)
OP1: (57.752,0.947,-26.826)
OP2: (58.442,-1.111,-28.133)
C2: (52.635,1.154,-23.763)
C1': (53.591,-0.756,-24.773)
C3': (53.730,-2.638,-26.150)
O5': (56.087,-0.866,-27.247)
O4': (54.939,-1.157,-24.748)
C5': (56.194,-2.119,-26.573)
P: (57.406,-0.135,-27.775)
C4': (55.098,-2.340,-25.566)
C2': (53.039,-1.289,-26.077)
O2': (51.632,-1.346,-26.059)
N1: (53.544,0.688,-24.666)
O4: (53.178,4.590,-24.117)
O2: (51.945,0.412,-23.122)
C6: (54.355,1.493,-25.432)
C5: (54.272,2.816,-25.276)
O3': (53.071,-3.565,-25.302)
OP1: (52.349,-5.926,-24.878)
OP2: (54.794,-5.190,-24.573)
C3': (53.740,-7.317,-28.825)
C1': (54.761,-6.090,-30.535)
C5': (52.743,-5.212,-27.803)
O4': (53.782,-5.269,-29.958)
C8: (56.254,-5.146,-28.731)
O2': (53.436,-7.975,-31.132)
C6: (59.496,-4.951,-30.008)
C5: (58.158,-5.097,-29.651)
C4: (57.291,-5.610,-30.587)
P: (53.532,-5.102,-25.330)
C4': (52.975,-6.027,-29.029)
C2': (54.397,-7.522,-30.181)
C2: (58.914,-5.814,-32.038)
N1: (59.869,-5.327,-31.240)
N3: (57.611,-5.999,-31.816)
N6: (60.411,-4.456,-29.183)
N7: (57.501,-4.804,-28.484)
N9: (56.065,-5.673,-29.985)
O5': (53.810,-5.339,-26.881)
O3': (52.905,-8.391,-28.432)
Image (generated by PyMOL):
PyMOL image
show in jmol