Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A28:A35
Extra
PDB:
ATOM 1 O3' G A 27 -5.701 -45.055 -1.277 1.00 32.50 O
ATOM 2 P A A 28 -5.880 -46.100 -2.493 1.00 31.12 P
ATOM 3 OP1 A A 28 -5.371 -47.431 -2.103 1.00 31.30 O
ATOM 4 OP2 A A 28 -5.299 -45.419 -3.679 1.00 31.71 O
ATOM 5 O5' A A 28 -7.459 -46.194 -2.682 1.00 28.80 O
ATOM 6 C5' A A 28 -8.222 -44.993 -2.677 1.00 29.38 C
ATOM 7 C4' A A 28 -9.705 -45.256 -2.750 1.00 29.30 C
ATOM 8 O4' A A 28 -10.136 -46.269 -1.810 1.00 29.44 O
ATOM 9 C3' A A 28 -10.404 -43.983 -2.339 1.00 29.51 C
ATOM 10 O3' A A 28 -10.607 -43.225 -3.506 1.00 30.05 O
ATOM 11 C2' A A 28 -11.628 -44.460 -1.576 1.00 29.12 C
ATOM 12 O2' A A 28 -12.688 -44.791 -2.445 1.00 29.69 O
ATOM 13 C1' A A 28 -11.087 -45.730 -0.916 1.00 28.69 C
ATOM 14 N9 A A 28 -10.386 -45.576 0.362 1.00 29.04 N
ATOM 15 C8 A A 28 -9.095 -45.998 0.583 1.00 28.91 C
ATOM 16 N7 A A 28 -8.678 -45.824 1.809 1.00 27.94 N
ATOM 17 C5 A A 28 -9.763 -45.237 2.447 1.00 28.99 C
ATOM 18 C6 A A 28 -9.961 -44.820 3.773 1.00 29.13 C
ATOM 19 N6 A A 28 -9.052 -44.967 4.738 1.00 30.43 N
ATOM 20 N1 A A 28 -11.139 -44.248 4.081 1.00 29.43 N
ATOM 21 C2 A A 28 -12.059 -44.129 3.122 1.00 29.34 C
ATOM 22 N3 A A 28 -12.006 -44.503 1.845 1.00 29.36 N
ATOM 23 C4 A A 28 -10.816 -45.056 1.563 1.00 28.90 C
ATOM 24 P G A 29 -9.673 -41.953 -3.780 1.00 29.91 P
ATOM 25 OP1 G A 29 -9.662 -41.625 -5.215 1.00 29.22 O
ATOM 26 OP2 G A 29 -8.376 -42.166 -3.075 1.00 30.38 O
ATOM 27 O5' G A 29 -10.481 -40.821 -3.012 1.00 30.86 O
TER
ATOM 1 O3' U B 34 -21.026 -45.588 -1.079 1.00 43.11 O
ATOM 2 P C B 35 -20.083 -45.577 -2.383 1.00 41.61 P
ATOM 3 OP1 C B 35 -20.705 -44.763 -3.444 1.00 41.81 O
ATOM 4 OP2 C B 35 -19.693 -46.984 -2.663 1.00 41.13 O
ATOM 5 O5' C B 35 -18.771 -44.815 -1.903 1.00 40.33 O
ATOM 6 C5' C B 35 -17.554 -44.897 -2.663 1.00 37.73 C
ATOM 7 C4' C B 35 -16.358 -44.704 -1.761 1.00 35.64 C
ATOM 8 O4' C B 35 -16.460 -43.407 -1.113 1.00 34.56 O
ATOM 9 C3' C B 35 -16.212 -45.680 -0.603 1.00 34.87 C
ATOM 10 O3' C B 35 -15.605 -46.925 -0.958 1.00 35.11 O
ATOM 11 C2' C B 35 -15.361 -44.885 0.373 1.00 34.07 C
ATOM 12 O2' C B 35 -14.006 -44.868 -0.010 1.00 33.82 O
ATOM 13 C1' C B 35 -15.930 -43.479 0.200 1.00 33.69 C
ATOM 14 N1 C B 35 -17.008 -43.201 1.183 1.00 32.47 N
ATOM 15 C2 C B 35 -16.657 -42.922 2.516 1.00 31.54 C
ATOM 16 O2 C B 35 -15.464 -42.881 2.831 1.00 32.76 O
ATOM 17 N3 C B 35 -17.627 -42.703 3.428 1.00 30.77 N
ATOM 18 C4 C B 35 -18.906 -42.739 3.061 1.00 30.58 C
ATOM 19 N4 C B 35 -19.830 -42.514 4.001 1.00 28.61 N
ATOM 20 C5 C B 35 -19.296 -43.006 1.715 1.00 31.12 C
ATOM 21 C6 C B 35 -18.325 -43.228 0.816 1.00 31.48 C
ATOM 22 P C B 36 -15.958 -48.256 -0.105 1.00 34.65 P
ATOM 23 OP1 C B 36 -15.317 -49.440 -0.729 1.00 34.82 O
ATOM 24 OP2 C B 36 -17.424 -48.273 0.171 1.00 35.17 O
ATOM 25 O5' C B 36 -15.252 -48.011 1.297 1.00 34.17 O
TER
ATOM 2 P A A 28 -5.880 -46.100 -2.493 1.00 31.12 P
ATOM 3 OP1 A A 28 -5.371 -47.431 -2.103 1.00 31.30 O
ATOM 4 OP2 A A 28 -5.299 -45.419 -3.679 1.00 31.71 O
ATOM 5 O5' A A 28 -7.459 -46.194 -2.682 1.00 28.80 O
ATOM 6 C5' A A 28 -8.222 -44.993 -2.677 1.00 29.38 C
ATOM 7 C4' A A 28 -9.705 -45.256 -2.750 1.00 29.30 C
ATOM 8 O4' A A 28 -10.136 -46.269 -1.810 1.00 29.44 O
ATOM 9 C3' A A 28 -10.404 -43.983 -2.339 1.00 29.51 C
ATOM 10 O3' A A 28 -10.607 -43.225 -3.506 1.00 30.05 O
ATOM 11 C2' A A 28 -11.628 -44.460 -1.576 1.00 29.12 C
ATOM 12 O2' A A 28 -12.688 -44.791 -2.445 1.00 29.69 O
ATOM 13 C1' A A 28 -11.087 -45.730 -0.916 1.00 28.69 C
ATOM 14 N9 A A 28 -10.386 -45.576 0.362 1.00 29.04 N
ATOM 15 C8 A A 28 -9.095 -45.998 0.583 1.00 28.91 C
ATOM 16 N7 A A 28 -8.678 -45.824 1.809 1.00 27.94 N
ATOM 17 C5 A A 28 -9.763 -45.237 2.447 1.00 28.99 C
ATOM 18 C6 A A 28 -9.961 -44.820 3.773 1.00 29.13 C
ATOM 19 N6 A A 28 -9.052 -44.967 4.738 1.00 30.43 N
ATOM 20 N1 A A 28 -11.139 -44.248 4.081 1.00 29.43 N
ATOM 21 C2 A A 28 -12.059 -44.129 3.122 1.00 29.34 C
ATOM 22 N3 A A 28 -12.006 -44.503 1.845 1.00 29.36 N
ATOM 23 C4 A A 28 -10.816 -45.056 1.563 1.00 28.90 C
ATOM 24 P G A 29 -9.673 -41.953 -3.780 1.00 29.91 P
ATOM 25 OP1 G A 29 -9.662 -41.625 -5.215 1.00 29.22 O
ATOM 26 OP2 G A 29 -8.376 -42.166 -3.075 1.00 30.38 O
ATOM 27 O5' G A 29 -10.481 -40.821 -3.012 1.00 30.86 O
TER
ATOM 1 O3' U B 34 -21.026 -45.588 -1.079 1.00 43.11 O
ATOM 2 P C B 35 -20.083 -45.577 -2.383 1.00 41.61 P
ATOM 3 OP1 C B 35 -20.705 -44.763 -3.444 1.00 41.81 O
ATOM 4 OP2 C B 35 -19.693 -46.984 -2.663 1.00 41.13 O
ATOM 5 O5' C B 35 -18.771 -44.815 -1.903 1.00 40.33 O
ATOM 6 C5' C B 35 -17.554 -44.897 -2.663 1.00 37.73 C
ATOM 7 C4' C B 35 -16.358 -44.704 -1.761 1.00 35.64 C
ATOM 8 O4' C B 35 -16.460 -43.407 -1.113 1.00 34.56 O
ATOM 9 C3' C B 35 -16.212 -45.680 -0.603 1.00 34.87 C
ATOM 10 O3' C B 35 -15.605 -46.925 -0.958 1.00 35.11 O
ATOM 11 C2' C B 35 -15.361 -44.885 0.373 1.00 34.07 C
ATOM 12 O2' C B 35 -14.006 -44.868 -0.010 1.00 33.82 O
ATOM 13 C1' C B 35 -15.930 -43.479 0.200 1.00 33.69 C
ATOM 14 N1 C B 35 -17.008 -43.201 1.183 1.00 32.47 N
ATOM 15 C2 C B 35 -16.657 -42.922 2.516 1.00 31.54 C
ATOM 16 O2 C B 35 -15.464 -42.881 2.831 1.00 32.76 O
ATOM 17 N3 C B 35 -17.627 -42.703 3.428 1.00 30.77 N
ATOM 18 C4 C B 35 -18.906 -42.739 3.061 1.00 30.58 C
ATOM 19 N4 C B 35 -19.830 -42.514 4.001 1.00 28.61 N
ATOM 20 C5 C B 35 -19.296 -43.006 1.715 1.00 31.12 C
ATOM 21 C6 C B 35 -18.325 -43.228 0.816 1.00 31.48 C
ATOM 22 P C B 36 -15.958 -48.256 -0.105 1.00 34.65 P
ATOM 23 OP1 C B 36 -15.317 -49.440 -0.729 1.00 34.82 O
ATOM 24 OP2 C B 36 -17.424 -48.273 0.171 1.00 35.17 O
ATOM 25 O5' C B 36 -15.252 -48.011 1.297 1.00 34.17 O
TER
Atoms:
OP1: (-5.371,-47.431,-2.103)
OP2: (-5.299,-45.419,-3.679)
C3': (-10.404,-43.983,-2.339)
C1': (-11.087,-45.730,-0.916)
C5': (-8.222,-44.993,-2.677)
O4': (-10.136,-46.269,-1.810)
C8: (-9.095,-45.998,0.583)
O2': (-12.688,-44.791,-2.445)
C6: (-9.961,-44.820,3.773)
C5: (-9.763,-45.237,2.447)
C4: (-10.816,-45.056,1.563)
P: (-5.880,-46.100,-2.493)
C4': (-9.705,-45.256,-2.750)
C2': (-11.628,-44.460,-1.576)
C2: (-12.059,-44.129,3.122)
N1: (-11.139,-44.248,4.081)
N3: (-12.006,-44.503,1.845)
N6: (-9.052,-44.967,4.738)
N7: (-8.678,-45.824,1.809)
N9: (-10.386,-45.576,0.362)
O5': (-7.459,-46.194,-2.682)
O3': (-10.607,-43.225,-3.506)
OP2: (-5.299,-45.419,-3.679)
C3': (-10.404,-43.983,-2.339)
C1': (-11.087,-45.730,-0.916)
C5': (-8.222,-44.993,-2.677)
O4': (-10.136,-46.269,-1.810)
C8: (-9.095,-45.998,0.583)
O2': (-12.688,-44.791,-2.445)
C6: (-9.961,-44.820,3.773)
C5: (-9.763,-45.237,2.447)
C4: (-10.816,-45.056,1.563)
P: (-5.880,-46.100,-2.493)
C4': (-9.705,-45.256,-2.750)
C2': (-11.628,-44.460,-1.576)
C2: (-12.059,-44.129,3.122)
N1: (-11.139,-44.248,4.081)
N3: (-12.006,-44.503,1.845)
N6: (-9.052,-44.967,4.738)
N7: (-8.678,-45.824,1.809)
N9: (-10.386,-45.576,0.362)
O5': (-7.459,-46.194,-2.682)
O3': (-10.607,-43.225,-3.506)
C2: (-16.657,-42.922,2.516)
OP1: (-20.705,-44.763,-3.444)
OP2: (-19.693,-46.984,-2.663)
C4: (-18.906,-42.739,3.061)
O5': (-18.771,-44.815,-1.903)
C3': (-16.212,-45.680,-0.603)
C1': (-15.930,-43.479,0.200)
O4': (-16.460,-43.407,-1.113)
C5': (-17.554,-44.897,-2.663)
P: (-20.083,-45.577,-2.383)
O2: (-15.464,-42.881,2.831)
C4': (-16.358,-44.704,-1.761)
C2': (-15.361,-44.885,0.373)
O2': (-14.006,-44.868,-0.010)
N1: (-17.008,-43.201,1.183)
N3: (-17.627,-42.703,3.428)
N4: (-19.830,-42.514,4.001)
C6: (-18.325,-43.228,0.816)
C5: (-19.296,-43.006,1.715)
O3': (-15.605,-46.925,-0.958)
OP1: (-20.705,-44.763,-3.444)
OP2: (-19.693,-46.984,-2.663)
C4: (-18.906,-42.739,3.061)
O5': (-18.771,-44.815,-1.903)
C3': (-16.212,-45.680,-0.603)
C1': (-15.930,-43.479,0.200)
O4': (-16.460,-43.407,-1.113)
C5': (-17.554,-44.897,-2.663)
P: (-20.083,-45.577,-2.383)
O2: (-15.464,-42.881,2.831)
C4': (-16.358,-44.704,-1.761)
C2': (-15.361,-44.885,0.373)
O2': (-14.006,-44.868,-0.010)
N1: (-17.008,-43.201,1.183)
N3: (-17.627,-42.703,3.428)
N4: (-19.830,-42.514,4.001)
C6: (-18.325,-43.228,0.816)
C5: (-19.296,-43.006,1.715)
O3': (-15.605,-46.925,-0.958)
Image (generated by PyMOL):