Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0474:0493
Extra
PDB:
ATOM 1 O3' A A 473 24.498 162.257 48.858 1.00 45.26 O
ATOM 2 P A A 474 23.796 163.209 47.767 1.00 45.64 P
ATOM 3 OP1 A A 474 23.705 162.490 46.464 1.00 45.11 O
ATOM 4 OP2 A A 474 24.452 164.540 47.823 1.00 47.14 O
ATOM 5 O5' A A 474 22.332 163.387 48.366 1.00 44.01 O
ATOM 6 C5' A A 474 21.457 162.260 48.507 1.00 42.81 C
ATOM 7 C4' A A 474 20.343 162.570 49.477 1.00 42.40 C
ATOM 8 O4' A A 474 19.350 161.515 49.386 1.00 43.59 O
ATOM 9 C3' A A 474 20.735 162.634 50.944 1.00 44.08 C
ATOM 10 O3' A A 474 21.172 163.946 51.313 1.00 46.50 O
ATOM 11 C2' A A 474 19.444 162.215 51.640 1.00 44.66 C
ATOM 12 O2' A A 474 18.507 163.267 51.746 1.00 47.01 O
ATOM 13 C1' A A 474 18.912 161.145 50.679 1.00 43.09 C
ATOM 14 N9 A A 474 19.448 159.812 50.967 1.00 41.20 N
ATOM 15 C8 A A 474 20.360 159.092 50.230 1.00 41.39 C
ATOM 16 N7 A A 474 20.732 157.973 50.796 1.00 39.58 N
ATOM 17 C5 A A 474 20.003 157.942 51.975 1.00 41.09 C
ATOM 18 C6 A A 474 19.974 157.031 53.039 1.00 41.92 C
ATOM 19 N6 A A 474 20.748 155.942 53.096 1.00 43.11 N
ATOM 20 N1 A A 474 19.125 157.282 54.061 1.00 41.84 N
ATOM 21 C2 A A 474 18.371 158.388 54.010 1.00 40.70 C
ATOM 22 N3 A A 474 18.323 159.330 53.074 1.00 40.52 N
ATOM 23 C4 A A 474 19.177 159.047 52.074 1.00 40.59 C
ATOM 24 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 25 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 26 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 27 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
TER
ATOM 1 O3' G B 492 12.549 165.946 57.521 1.00 51.87 O
ATOM 2 P C B 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 3 OP1 C B 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 4 OP2 C B 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 5 O5' C B 493 13.142 163.713 56.506 1.00 51.57 O
ATOM 6 C5' C B 493 13.653 164.192 55.251 1.00 51.36 C
ATOM 7 C4' C B 493 14.723 163.265 54.734 1.00 49.97 C
ATOM 8 O4' C B 493 15.831 163.240 55.669 1.00 49.32 O
ATOM 9 C3' C B 493 14.305 161.814 54.602 1.00 49.11 C
ATOM 10 O3' C B 493 13.622 161.598 53.371 1.00 48.51 O
ATOM 11 C2' C B 493 15.641 161.086 54.689 1.00 49.09 C
ATOM 12 O2' C B 493 16.380 161.116 53.478 1.00 48.15 O
ATOM 13 C1' C B 493 16.371 161.934 55.733 1.00 47.34 C
ATOM 14 N1 C B 493 16.242 161.451 57.119 1.00 46.34 N
ATOM 15 C2 C B 493 17.115 160.458 57.570 1.00 45.34 C
ATOM 16 O2 C B 493 17.947 159.988 56.781 1.00 47.27 O
ATOM 17 N3 C B 493 17.032 160.036 58.851 1.00 44.44 N
ATOM 18 C4 C B 493 16.126 160.569 59.673 1.00 45.63 C
ATOM 19 N4 C B 493 16.103 160.145 60.935 1.00 45.48 N
ATOM 20 C5 C B 493 15.209 161.568 59.237 1.00 45.78 C
ATOM 21 C6 C B 493 15.299 161.974 57.963 1.00 47.43 C
ATOM 22 P G B 494 12.297 160.694 53.341 1.00 48.07 P
ATOM 23 OP1 G B 494 11.741 160.804 51.975 1.00 48.14 O
ATOM 24 OP2 G B 494 11.443 161.018 54.518 1.00 46.39 O
ATOM 25 O5' G B 494 12.827 159.206 53.524 1.00 48.74 O
TER
ATOM 2 P A A 474 23.796 163.209 47.767 1.00 45.64 P
ATOM 3 OP1 A A 474 23.705 162.490 46.464 1.00 45.11 O
ATOM 4 OP2 A A 474 24.452 164.540 47.823 1.00 47.14 O
ATOM 5 O5' A A 474 22.332 163.387 48.366 1.00 44.01 O
ATOM 6 C5' A A 474 21.457 162.260 48.507 1.00 42.81 C
ATOM 7 C4' A A 474 20.343 162.570 49.477 1.00 42.40 C
ATOM 8 O4' A A 474 19.350 161.515 49.386 1.00 43.59 O
ATOM 9 C3' A A 474 20.735 162.634 50.944 1.00 44.08 C
ATOM 10 O3' A A 474 21.172 163.946 51.313 1.00 46.50 O
ATOM 11 C2' A A 474 19.444 162.215 51.640 1.00 44.66 C
ATOM 12 O2' A A 474 18.507 163.267 51.746 1.00 47.01 O
ATOM 13 C1' A A 474 18.912 161.145 50.679 1.00 43.09 C
ATOM 14 N9 A A 474 19.448 159.812 50.967 1.00 41.20 N
ATOM 15 C8 A A 474 20.360 159.092 50.230 1.00 41.39 C
ATOM 16 N7 A A 474 20.732 157.973 50.796 1.00 39.58 N
ATOM 17 C5 A A 474 20.003 157.942 51.975 1.00 41.09 C
ATOM 18 C6 A A 474 19.974 157.031 53.039 1.00 41.92 C
ATOM 19 N6 A A 474 20.748 155.942 53.096 1.00 43.11 N
ATOM 20 N1 A A 474 19.125 157.282 54.061 1.00 41.84 N
ATOM 21 C2 A A 474 18.371 158.388 54.010 1.00 40.70 C
ATOM 22 N3 A A 474 18.323 159.330 53.074 1.00 40.52 N
ATOM 23 C4 A A 474 19.177 159.047 52.074 1.00 40.59 C
ATOM 24 P G A 475 21.868 164.206 52.753 1.00 48.50 P
ATOM 25 OP1 G A 475 21.436 163.171 53.732 1.00 49.55 O
ATOM 26 OP2 G A 475 21.668 165.638 53.084 1.00 47.39 O
ATOM 27 O5' G A 475 23.423 164.004 52.474 1.00 46.62 O
TER
ATOM 1 O3' G B 492 12.549 165.946 57.521 1.00 51.87 O
ATOM 2 P C B 493 11.955 164.479 57.242 1.00 52.93 P
ATOM 3 OP1 C B 493 10.849 164.632 56.263 1.00 54.46 O
ATOM 4 OP2 C B 493 11.697 163.808 58.542 1.00 53.55 O
ATOM 5 O5' C B 493 13.142 163.713 56.506 1.00 51.57 O
ATOM 6 C5' C B 493 13.653 164.192 55.251 1.00 51.36 C
ATOM 7 C4' C B 493 14.723 163.265 54.734 1.00 49.97 C
ATOM 8 O4' C B 493 15.831 163.240 55.669 1.00 49.32 O
ATOM 9 C3' C B 493 14.305 161.814 54.602 1.00 49.11 C
ATOM 10 O3' C B 493 13.622 161.598 53.371 1.00 48.51 O
ATOM 11 C2' C B 493 15.641 161.086 54.689 1.00 49.09 C
ATOM 12 O2' C B 493 16.380 161.116 53.478 1.00 48.15 O
ATOM 13 C1' C B 493 16.371 161.934 55.733 1.00 47.34 C
ATOM 14 N1 C B 493 16.242 161.451 57.119 1.00 46.34 N
ATOM 15 C2 C B 493 17.115 160.458 57.570 1.00 45.34 C
ATOM 16 O2 C B 493 17.947 159.988 56.781 1.00 47.27 O
ATOM 17 N3 C B 493 17.032 160.036 58.851 1.00 44.44 N
ATOM 18 C4 C B 493 16.126 160.569 59.673 1.00 45.63 C
ATOM 19 N4 C B 493 16.103 160.145 60.935 1.00 45.48 N
ATOM 20 C5 C B 493 15.209 161.568 59.237 1.00 45.78 C
ATOM 21 C6 C B 493 15.299 161.974 57.963 1.00 47.43 C
ATOM 22 P G B 494 12.297 160.694 53.341 1.00 48.07 P
ATOM 23 OP1 G B 494 11.741 160.804 51.975 1.00 48.14 O
ATOM 24 OP2 G B 494 11.443 161.018 54.518 1.00 46.39 O
ATOM 25 O5' G B 494 12.827 159.206 53.524 1.00 48.74 O
TER
Atoms:
OP1: (23.705,162.490,46.464)
OP2: (24.452,164.540,47.823)
C3': (20.735,162.634,50.944)
C1': (18.912,161.145,50.679)
C5': (21.457,162.260,48.507)
O4': (19.350,161.515,49.386)
C8: (20.360,159.092,50.230)
O2': (18.507,163.267,51.746)
C6: (19.974,157.031,53.039)
C5: (20.003,157.942,51.975)
C4: (19.177,159.047,52.074)
P: (23.796,163.209,47.767)
C4': (20.343,162.570,49.477)
C2': (19.444,162.215,51.640)
C2: (18.371,158.388,54.010)
N1: (19.125,157.282,54.061)
N3: (18.323,159.330,53.074)
N6: (20.748,155.942,53.096)
N7: (20.732,157.973,50.796)
N9: (19.448,159.812,50.967)
O5': (22.332,163.387,48.366)
O3': (21.172,163.946,51.313)
OP2: (24.452,164.540,47.823)
C3': (20.735,162.634,50.944)
C1': (18.912,161.145,50.679)
C5': (21.457,162.260,48.507)
O4': (19.350,161.515,49.386)
C8: (20.360,159.092,50.230)
O2': (18.507,163.267,51.746)
C6: (19.974,157.031,53.039)
C5: (20.003,157.942,51.975)
C4: (19.177,159.047,52.074)
P: (23.796,163.209,47.767)
C4': (20.343,162.570,49.477)
C2': (19.444,162.215,51.640)
C2: (18.371,158.388,54.010)
N1: (19.125,157.282,54.061)
N3: (18.323,159.330,53.074)
N6: (20.748,155.942,53.096)
N7: (20.732,157.973,50.796)
N9: (19.448,159.812,50.967)
O5': (22.332,163.387,48.366)
O3': (21.172,163.946,51.313)
C2: (17.115,160.458,57.570)
OP1: (10.849,164.632,56.263)
OP2: (11.697,163.808,58.542)
C4: (16.126,160.569,59.673)
O5': (13.142,163.713,56.506)
C3': (14.305,161.814,54.602)
C1': (16.371,161.934,55.733)
O4': (15.831,163.240,55.669)
C5': (13.653,164.192,55.251)
P: (11.955,164.479,57.242)
O2: (17.947,159.988,56.781)
C4': (14.723,163.265,54.734)
C2': (15.641,161.086,54.689)
O2': (16.380,161.116,53.478)
N1: (16.242,161.451,57.119)
N3: (17.032,160.036,58.851)
N4: (16.103,160.145,60.935)
C6: (15.299,161.974,57.963)
C5: (15.209,161.568,59.237)
O3': (13.622,161.598,53.371)
OP1: (10.849,164.632,56.263)
OP2: (11.697,163.808,58.542)
C4: (16.126,160.569,59.673)
O5': (13.142,163.713,56.506)
C3': (14.305,161.814,54.602)
C1': (16.371,161.934,55.733)
O4': (15.831,163.240,55.669)
C5': (13.653,164.192,55.251)
P: (11.955,164.479,57.242)
O2: (17.947,159.988,56.781)
C4': (14.723,163.265,54.734)
C2': (15.641,161.086,54.689)
O2': (16.380,161.116,53.478)
N1: (16.242,161.451,57.119)
N3: (17.032,160.036,58.851)
N4: (16.103,160.145,60.935)
C6: (15.299,161.974,57.963)
C5: (15.209,161.568,59.237)
O3': (13.622,161.598,53.371)
Image (generated by PyMOL):