Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0251:0252
Extra
PDB:
ATOM 1 O3' A A 250 99.934 119.384 1.853 1.00 51.72 O
ATOM 2 P U A 251 101.068 119.261 2.986 1.00 52.36 P
ATOM 3 OP1 U A 251 101.835 120.524 3.102 1.00 51.10 O
ATOM 4 OP2 U A 251 101.789 117.986 2.762 1.00 52.01 O
ATOM 5 O5' U A 251 100.236 119.132 4.333 1.00 54.53 O
ATOM 6 C5' U A 251 99.624 117.890 4.735 1.00 51.05 C
ATOM 7 C4' U A 251 98.903 118.088 6.048 1.00 49.40 C
ATOM 8 O4' U A 251 99.881 118.397 7.082 1.00 47.69 O
ATOM 9 C3' U A 251 97.910 119.248 6.047 1.00 48.31 C
ATOM 10 O3' U A 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 11 C2' U A 251 98.735 120.402 6.609 1.00 48.68 C
ATOM 12 O2' U A 251 97.933 121.393 7.216 1.00 46.10 O
ATOM 13 C1' U A 251 99.616 119.677 7.626 1.00 49.36 C
ATOM 14 N1 U A 251 100.904 120.327 7.924 1.00 50.74 N
ATOM 15 C2 U A 251 101.125 120.760 9.223 1.00 54.09 C
ATOM 16 O2 U A 251 100.294 120.666 10.107 1.00 56.52 O
ATOM 17 N3 U A 251 102.360 121.312 9.454 1.00 55.94 N
ATOM 18 C4 U A 251 103.374 121.483 8.543 1.00 56.01 C
ATOM 19 O4 U A 251 104.450 121.958 8.918 1.00 57.32 O
ATOM 20 C5 U A 251 103.063 121.036 7.217 1.00 55.11 C
ATOM 21 C6 U A 251 101.868 120.489 6.961 1.00 52.17 C
ATOM 22 P G A 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 23 OP1 G A 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 24 OP2 G A 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 25 O5' G A 252 95.416 118.808 4.798 1.00 48.80 O
TER
ATOM 1 O3' U B 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 2 P G B 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 3 OP1 G B 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 4 OP2 G B 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 5 O5' G B 252 95.416 118.808 4.798 1.00 48.80 O
ATOM 6 C5' G B 252 94.986 120.161 4.647 1.00 50.67 C
ATOM 7 C4' G B 252 93.915 120.227 3.604 1.00 51.07 C
ATOM 8 O4' G B 252 94.503 119.881 2.323 1.00 51.60 O
ATOM 9 C3' G B 252 92.773 119.246 3.829 1.00 51.87 C
ATOM 10 O3' G B 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 11 C2' G B 252 93.213 118.011 3.045 1.00 51.98 C
ATOM 12 O2' G B 252 92.142 117.228 2.550 1.00 51.59 O
ATOM 13 C1' G B 252 94.041 118.608 1.903 1.00 51.94 C
ATOM 14 N9 G B 252 95.206 117.773 1.607 1.00 51.29 N
ATOM 15 C8 G B 252 95.992 117.111 2.521 1.00 50.32 C
ATOM 16 N7 G B 252 96.922 116.385 1.969 1.00 50.59 N
ATOM 17 C5 G B 252 96.752 116.582 0.606 1.00 51.38 C
ATOM 18 C6 G B 252 97.457 116.025 -0.500 1.00 51.77 C
ATOM 19 O6 G B 252 98.384 115.196 -0.491 1.00 51.09 O
ATOM 20 N1 G B 252 96.974 116.515 -1.711 1.00 51.20 N
ATOM 21 C2 G B 252 95.944 117.413 -1.846 1.00 50.24 C
ATOM 22 N2 G B 252 95.644 117.778 -3.100 1.00 48.41 N
ATOM 23 N3 G B 252 95.261 117.917 -0.827 1.00 51.22 N
ATOM 24 C4 G B 252 95.716 117.460 0.363 1.00 51.43 C
ATOM 25 P U B 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 26 OP1 U B 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 27 OP2 U B 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 28 O5' U B 253 89.135 120.454 3.576 1.00 53.27 O
TER
ATOM 2 P U A 251 101.068 119.261 2.986 1.00 52.36 P
ATOM 3 OP1 U A 251 101.835 120.524 3.102 1.00 51.10 O
ATOM 4 OP2 U A 251 101.789 117.986 2.762 1.00 52.01 O
ATOM 5 O5' U A 251 100.236 119.132 4.333 1.00 54.53 O
ATOM 6 C5' U A 251 99.624 117.890 4.735 1.00 51.05 C
ATOM 7 C4' U A 251 98.903 118.088 6.048 1.00 49.40 C
ATOM 8 O4' U A 251 99.881 118.397 7.082 1.00 47.69 O
ATOM 9 C3' U A 251 97.910 119.248 6.047 1.00 48.31 C
ATOM 10 O3' U A 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 11 C2' U A 251 98.735 120.402 6.609 1.00 48.68 C
ATOM 12 O2' U A 251 97.933 121.393 7.216 1.00 46.10 O
ATOM 13 C1' U A 251 99.616 119.677 7.626 1.00 49.36 C
ATOM 14 N1 U A 251 100.904 120.327 7.924 1.00 50.74 N
ATOM 15 C2 U A 251 101.125 120.760 9.223 1.00 54.09 C
ATOM 16 O2 U A 251 100.294 120.666 10.107 1.00 56.52 O
ATOM 17 N3 U A 251 102.360 121.312 9.454 1.00 55.94 N
ATOM 18 C4 U A 251 103.374 121.483 8.543 1.00 56.01 C
ATOM 19 O4 U A 251 104.450 121.958 8.918 1.00 57.32 O
ATOM 20 C5 U A 251 103.063 121.036 7.217 1.00 55.11 C
ATOM 21 C6 U A 251 101.868 120.489 6.961 1.00 52.17 C
ATOM 22 P G A 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 23 OP1 G A 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 24 OP2 G A 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 25 O5' G A 252 95.416 118.808 4.798 1.00 48.80 O
TER
ATOM 1 O3' U B 251 96.793 118.946 6.872 1.00 48.05 O
ATOM 2 P G B 252 95.544 118.164 6.238 1.00 48.17 P
ATOM 3 OP1 G B 252 94.304 118.491 6.981 1.00 47.94 O
ATOM 4 OP2 G B 252 95.946 116.753 6.069 1.00 48.50 O
ATOM 5 O5' G B 252 95.416 118.808 4.798 1.00 48.80 O
ATOM 6 C5' G B 252 94.986 120.161 4.647 1.00 50.67 C
ATOM 7 C4' G B 252 93.915 120.227 3.604 1.00 51.07 C
ATOM 8 O4' G B 252 94.503 119.881 2.323 1.00 51.60 O
ATOM 9 C3' G B 252 92.773 119.246 3.829 1.00 51.87 C
ATOM 10 O3' G B 252 91.541 119.773 3.379 1.00 52.84 O
ATOM 11 C2' G B 252 93.213 118.011 3.045 1.00 51.98 C
ATOM 12 O2' G B 252 92.142 117.228 2.550 1.00 51.59 O
ATOM 13 C1' G B 252 94.041 118.608 1.903 1.00 51.94 C
ATOM 14 N9 G B 252 95.206 117.773 1.607 1.00 51.29 N
ATOM 15 C8 G B 252 95.992 117.111 2.521 1.00 50.32 C
ATOM 16 N7 G B 252 96.922 116.385 1.969 1.00 50.59 N
ATOM 17 C5 G B 252 96.752 116.582 0.606 1.00 51.38 C
ATOM 18 C6 G B 252 97.457 116.025 -0.500 1.00 51.77 C
ATOM 19 O6 G B 252 98.384 115.196 -0.491 1.00 51.09 O
ATOM 20 N1 G B 252 96.974 116.515 -1.711 1.00 51.20 N
ATOM 21 C2 G B 252 95.944 117.413 -1.846 1.00 50.24 C
ATOM 22 N2 G B 252 95.644 117.778 -3.100 1.00 48.41 N
ATOM 23 N3 G B 252 95.261 117.917 -0.827 1.00 51.22 N
ATOM 24 C4 G B 252 95.716 117.460 0.363 1.00 51.43 C
ATOM 25 P U B 253 90.213 119.487 4.231 1.00 52.80 P
ATOM 26 OP1 U B 253 90.479 119.926 5.621 1.00 52.92 O
ATOM 27 OP2 U B 253 89.779 118.093 3.979 1.00 53.66 O
ATOM 28 O5' U B 253 89.135 120.454 3.576 1.00 53.27 O
TER
Atoms:
C4: (103.374,121.483,8.543)
N3: (102.360,121.312,9.454)
OP1: (101.835,120.524,3.102)
OP2: (101.789,117.986,2.762)
C2: (101.125,120.760,9.223)
C1': (99.616,119.677,7.626)
C3': (97.910,119.248,6.047)
O5': (100.236,119.132,4.333)
O4': (99.881,118.397,7.082)
C5': (99.624,117.890,4.735)
P: (101.068,119.261,2.986)
C4': (98.903,118.088,6.048)
C2': (98.735,120.402,6.609)
O2': (97.933,121.393,7.216)
N1: (100.904,120.327,7.924)
O4: (104.450,121.958,8.918)
O2: (100.294,120.666,10.107)
C6: (101.868,120.489,6.961)
C5: (103.063,121.036,7.217)
O3': (96.793,118.946,6.872)
N3: (102.360,121.312,9.454)
OP1: (101.835,120.524,3.102)
OP2: (101.789,117.986,2.762)
C2: (101.125,120.760,9.223)
C1': (99.616,119.677,7.626)
C3': (97.910,119.248,6.047)
O5': (100.236,119.132,4.333)
O4': (99.881,118.397,7.082)
C5': (99.624,117.890,4.735)
P: (101.068,119.261,2.986)
C4': (98.903,118.088,6.048)
C2': (98.735,120.402,6.609)
O2': (97.933,121.393,7.216)
N1: (100.904,120.327,7.924)
O4: (104.450,121.958,8.918)
O2: (100.294,120.666,10.107)
C6: (101.868,120.489,6.961)
C5: (103.063,121.036,7.217)
O3': (96.793,118.946,6.872)
OP1: (94.304,118.491,6.981)
OP2: (95.946,116.753,6.069)
C3': (92.773,119.246,3.829)
C1': (94.041,118.608,1.903)
C5': (94.986,120.161,4.647)
O6: (98.384,115.196,-0.491)
O4': (94.503,119.881,2.323)
C8: (95.992,117.111,2.521)
C2: (95.944,117.413,-1.846)
C6: (97.457,116.025,-0.500)
C5: (96.752,116.582,0.606)
C4: (95.716,117.460,0.363)
P: (95.544,118.164,6.238)
C4': (93.915,120.227,3.604)
C2': (93.213,118.011,3.045)
O2': (92.142,117.228,2.550)
N1: (96.974,116.515,-1.711)
N2: (95.644,117.778,-3.100)
N3: (95.261,117.917,-0.827)
N7: (96.922,116.385,1.969)
N9: (95.206,117.773,1.607)
O5': (95.416,118.808,4.798)
O3': (91.541,119.773,3.379)
OP2: (95.946,116.753,6.069)
C3': (92.773,119.246,3.829)
C1': (94.041,118.608,1.903)
C5': (94.986,120.161,4.647)
O6: (98.384,115.196,-0.491)
O4': (94.503,119.881,2.323)
C8: (95.992,117.111,2.521)
C2: (95.944,117.413,-1.846)
C6: (97.457,116.025,-0.500)
C5: (96.752,116.582,0.606)
C4: (95.716,117.460,0.363)
P: (95.544,118.164,6.238)
C4': (93.915,120.227,3.604)
C2': (93.213,118.011,3.045)
O2': (92.142,117.228,2.550)
N1: (96.974,116.515,-1.711)
N2: (95.644,117.778,-3.100)
N3: (95.261,117.917,-0.827)
N7: (96.922,116.385,1.969)
N9: (95.206,117.773,1.607)
O5': (95.416,118.808,4.798)
O3': (91.541,119.773,3.379)
Image (generated by PyMOL):