Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:B40:B41
Extra
PDB:
ATOM 1 O3' U A 39 -16.532 -2.466 -96.102 1.00 62.51 O
ATOM 2 P U A 40 -16.864 -0.932 -96.396 1.00 65.02 P
ATOM 3 OP1 U A 40 -17.529 -0.351 -95.210 1.00 65.13 O
ATOM 4 OP2 U A 40 -17.539 -0.914 -97.714 1.00 66.09 O
ATOM 5 O5' U A 40 -15.406 -0.290 -96.564 1.00 65.39 O
ATOM 6 C5' U A 40 -14.743 -0.377 -97.833 1.00 67.89 C
ATOM 7 C4' U A 40 -13.265 -0.017 -97.774 1.00 67.91 C
ATOM 8 O4' U A 40 -13.047 1.290 -97.174 1.00 70.22 O
ATOM 9 C3' U A 40 -12.377 -0.914 -96.934 1.00 67.22 C
ATOM 10 O3' U A 40 -11.060 -0.729 -97.420 1.00 64.55 O
ATOM 11 C2' U A 40 -12.561 -0.329 -95.537 1.00 68.75 C
ATOM 12 O2' U A 40 -11.524 -0.622 -94.639 1.00 67.13 O
ATOM 13 C1' U A 40 -12.500 1.157 -95.866 1.00 71.39 C
ATOM 14 N1 U A 40 -13.258 2.118 -94.980 1.00 74.18 N
ATOM 15 C2 U A 40 -12.678 3.348 -94.692 1.00 74.59 C
ATOM 16 O2 U A 40 -11.577 3.683 -95.088 1.00 73.22 O
ATOM 17 N3 U A 40 -13.437 4.185 -93.900 1.00 76.38 N
ATOM 18 C4 U A 40 -14.702 3.926 -93.383 1.00 77.66 C
ATOM 19 O4 U A 40 -15.262 4.773 -92.691 1.00 78.13 O
ATOM 20 C5 U A 40 -15.251 2.630 -93.729 1.00 77.80 C
ATOM 21 C6 U A 40 -14.527 1.795 -94.495 1.00 76.63 C
ATOM 22 P G A 41 -9.933 -1.856 -97.418 1.00 61.40 P
ATOM 23 OP1 G A 41 -8.754 -1.311 -96.687 1.00 59.86 O
ATOM 24 OP2 G A 41 -9.816 -2.281 -98.837 1.00 60.45 O
ATOM 25 O5' G A 41 -10.582 -3.038 -96.544 1.00 59.25 O
TER
ATOM 1 O3' U B 40 -11.060 -0.729 -97.420 1.00 64.55 O
ATOM 2 P G B 41 -9.933 -1.856 -97.418 1.00 61.40 P
ATOM 3 OP1 G B 41 -8.754 -1.311 -96.687 1.00 59.86 O
ATOM 4 OP2 G B 41 -9.816 -2.281 -98.837 1.00 60.45 O
ATOM 5 O5' G B 41 -10.582 -3.038 -96.544 1.00 59.25 O
ATOM 6 C5' G B 41 -10.140 -3.371 -95.227 1.00 55.96 C
ATOM 7 C4' G B 41 -10.749 -4.685 -94.757 1.00 55.05 C
ATOM 8 O4' G B 41 -12.201 -4.651 -94.808 1.00 56.37 O
ATOM 9 C3' G B 41 -10.390 -5.905 -95.604 1.00 52.68 C
ATOM 10 O3' G B 41 -9.062 -6.361 -95.344 1.00 48.74 O
ATOM 11 C2' G B 41 -11.451 -6.890 -95.148 1.00 53.83 C
ATOM 12 O2' G B 41 -11.172 -7.468 -93.889 1.00 52.47 O
ATOM 13 C1' G B 41 -12.664 -5.964 -95.095 1.00 57.35 C
ATOM 14 N9 G B 41 -13.368 -6.013 -96.369 1.00 58.81 N
ATOM 15 C8 G B 41 -13.250 -5.175 -97.448 1.00 59.25 C
ATOM 16 N7 G B 41 -14.013 -5.519 -98.448 1.00 60.71 N
ATOM 17 C5 G B 41 -14.665 -6.656 -98.005 1.00 61.20 C
ATOM 18 C6 G B 41 -15.614 -7.476 -98.647 1.00 62.92 C
ATOM 19 O6 G B 41 -16.066 -7.330 -99.781 1.00 64.24 O
ATOM 20 N1 G B 41 -16.036 -8.538 -97.849 1.00 63.53 N
ATOM 21 C2 G B 41 -15.578 -8.771 -96.573 1.00 62.73 C
ATOM 22 N2 G B 41 -16.069 -9.830 -95.921 1.00 63.41 N
ATOM 23 N3 G B 41 -14.689 -8.004 -95.963 1.00 61.67 N
ATOM 24 C4 G B 41 -14.276 -6.972 -96.734 1.00 60.36 C
ATOM 25 P A B 42 -8.170 -6.976 -96.521 1.00 46.42 P
ATOM 26 OP1 A B 42 -7.054 -6.080 -96.868 1.00 45.88 O
ATOM 27 OP2 A B 42 -9.089 -7.398 -97.596 1.00 47.20 O
ATOM 28 O5' A B 42 -7.527 -8.243 -95.801 1.00 43.26 O
TER
ATOM 2 P U A 40 -16.864 -0.932 -96.396 1.00 65.02 P
ATOM 3 OP1 U A 40 -17.529 -0.351 -95.210 1.00 65.13 O
ATOM 4 OP2 U A 40 -17.539 -0.914 -97.714 1.00 66.09 O
ATOM 5 O5' U A 40 -15.406 -0.290 -96.564 1.00 65.39 O
ATOM 6 C5' U A 40 -14.743 -0.377 -97.833 1.00 67.89 C
ATOM 7 C4' U A 40 -13.265 -0.017 -97.774 1.00 67.91 C
ATOM 8 O4' U A 40 -13.047 1.290 -97.174 1.00 70.22 O
ATOM 9 C3' U A 40 -12.377 -0.914 -96.934 1.00 67.22 C
ATOM 10 O3' U A 40 -11.060 -0.729 -97.420 1.00 64.55 O
ATOM 11 C2' U A 40 -12.561 -0.329 -95.537 1.00 68.75 C
ATOM 12 O2' U A 40 -11.524 -0.622 -94.639 1.00 67.13 O
ATOM 13 C1' U A 40 -12.500 1.157 -95.866 1.00 71.39 C
ATOM 14 N1 U A 40 -13.258 2.118 -94.980 1.00 74.18 N
ATOM 15 C2 U A 40 -12.678 3.348 -94.692 1.00 74.59 C
ATOM 16 O2 U A 40 -11.577 3.683 -95.088 1.00 73.22 O
ATOM 17 N3 U A 40 -13.437 4.185 -93.900 1.00 76.38 N
ATOM 18 C4 U A 40 -14.702 3.926 -93.383 1.00 77.66 C
ATOM 19 O4 U A 40 -15.262 4.773 -92.691 1.00 78.13 O
ATOM 20 C5 U A 40 -15.251 2.630 -93.729 1.00 77.80 C
ATOM 21 C6 U A 40 -14.527 1.795 -94.495 1.00 76.63 C
ATOM 22 P G A 41 -9.933 -1.856 -97.418 1.00 61.40 P
ATOM 23 OP1 G A 41 -8.754 -1.311 -96.687 1.00 59.86 O
ATOM 24 OP2 G A 41 -9.816 -2.281 -98.837 1.00 60.45 O
ATOM 25 O5' G A 41 -10.582 -3.038 -96.544 1.00 59.25 O
TER
ATOM 1 O3' U B 40 -11.060 -0.729 -97.420 1.00 64.55 O
ATOM 2 P G B 41 -9.933 -1.856 -97.418 1.00 61.40 P
ATOM 3 OP1 G B 41 -8.754 -1.311 -96.687 1.00 59.86 O
ATOM 4 OP2 G B 41 -9.816 -2.281 -98.837 1.00 60.45 O
ATOM 5 O5' G B 41 -10.582 -3.038 -96.544 1.00 59.25 O
ATOM 6 C5' G B 41 -10.140 -3.371 -95.227 1.00 55.96 C
ATOM 7 C4' G B 41 -10.749 -4.685 -94.757 1.00 55.05 C
ATOM 8 O4' G B 41 -12.201 -4.651 -94.808 1.00 56.37 O
ATOM 9 C3' G B 41 -10.390 -5.905 -95.604 1.00 52.68 C
ATOM 10 O3' G B 41 -9.062 -6.361 -95.344 1.00 48.74 O
ATOM 11 C2' G B 41 -11.451 -6.890 -95.148 1.00 53.83 C
ATOM 12 O2' G B 41 -11.172 -7.468 -93.889 1.00 52.47 O
ATOM 13 C1' G B 41 -12.664 -5.964 -95.095 1.00 57.35 C
ATOM 14 N9 G B 41 -13.368 -6.013 -96.369 1.00 58.81 N
ATOM 15 C8 G B 41 -13.250 -5.175 -97.448 1.00 59.25 C
ATOM 16 N7 G B 41 -14.013 -5.519 -98.448 1.00 60.71 N
ATOM 17 C5 G B 41 -14.665 -6.656 -98.005 1.00 61.20 C
ATOM 18 C6 G B 41 -15.614 -7.476 -98.647 1.00 62.92 C
ATOM 19 O6 G B 41 -16.066 -7.330 -99.781 1.00 64.24 O
ATOM 20 N1 G B 41 -16.036 -8.538 -97.849 1.00 63.53 N
ATOM 21 C2 G B 41 -15.578 -8.771 -96.573 1.00 62.73 C
ATOM 22 N2 G B 41 -16.069 -9.830 -95.921 1.00 63.41 N
ATOM 23 N3 G B 41 -14.689 -8.004 -95.963 1.00 61.67 N
ATOM 24 C4 G B 41 -14.276 -6.972 -96.734 1.00 60.36 C
ATOM 25 P A B 42 -8.170 -6.976 -96.521 1.00 46.42 P
ATOM 26 OP1 A B 42 -7.054 -6.080 -96.868 1.00 45.88 O
ATOM 27 OP2 A B 42 -9.089 -7.398 -97.596 1.00 47.20 O
ATOM 28 O5' A B 42 -7.527 -8.243 -95.801 1.00 43.26 O
TER
Atoms:
C4: (-14.702,3.926,-93.383)
N3: (-13.437,4.185,-93.900)
OP1: (-17.529,-0.351,-95.210)
OP2: (-17.539,-0.914,-97.714)
C2: (-12.678,3.348,-94.692)
C1': (-12.500,1.157,-95.866)
C3': (-12.377,-0.914,-96.934)
O5': (-15.406,-0.290,-96.564)
O4': (-13.047,1.290,-97.174)
C5': (-14.743,-0.377,-97.833)
P: (-16.864,-0.932,-96.396)
C4': (-13.265,-0.017,-97.774)
C2': (-12.561,-0.329,-95.537)
O2': (-11.524,-0.622,-94.639)
N1: (-13.258,2.118,-94.980)
O4: (-15.262,4.773,-92.691)
O2: (-11.577,3.683,-95.088)
C6: (-14.527,1.795,-94.495)
C5: (-15.251,2.630,-93.729)
O3': (-11.060,-0.729,-97.420)
N3: (-13.437,4.185,-93.900)
OP1: (-17.529,-0.351,-95.210)
OP2: (-17.539,-0.914,-97.714)
C2: (-12.678,3.348,-94.692)
C1': (-12.500,1.157,-95.866)
C3': (-12.377,-0.914,-96.934)
O5': (-15.406,-0.290,-96.564)
O4': (-13.047,1.290,-97.174)
C5': (-14.743,-0.377,-97.833)
P: (-16.864,-0.932,-96.396)
C4': (-13.265,-0.017,-97.774)
C2': (-12.561,-0.329,-95.537)
O2': (-11.524,-0.622,-94.639)
N1: (-13.258,2.118,-94.980)
O4: (-15.262,4.773,-92.691)
O2: (-11.577,3.683,-95.088)
C6: (-14.527,1.795,-94.495)
C5: (-15.251,2.630,-93.729)
O3': (-11.060,-0.729,-97.420)
OP1: (-8.754,-1.311,-96.687)
OP2: (-9.816,-2.281,-98.837)
C3': (-10.390,-5.905,-95.604)
C1': (-12.664,-5.964,-95.095)
C5': (-10.140,-3.371,-95.227)
O6: (-16.066,-7.330,-99.781)
O4': (-12.201,-4.651,-94.808)
C8: (-13.250,-5.175,-97.448)
C2: (-15.578,-8.771,-96.573)
C6: (-15.614,-7.476,-98.647)
C5: (-14.665,-6.656,-98.005)
C4: (-14.276,-6.972,-96.734)
P: (-9.933,-1.856,-97.418)
C4': (-10.749,-4.685,-94.757)
C2': (-11.451,-6.890,-95.148)
O2': (-11.172,-7.468,-93.889)
N1: (-16.036,-8.538,-97.849)
N2: (-16.069,-9.830,-95.921)
N3: (-14.689,-8.004,-95.963)
N7: (-14.013,-5.519,-98.448)
N9: (-13.368,-6.013,-96.369)
O5': (-10.582,-3.038,-96.544)
O3': (-9.062,-6.361,-95.344)
OP2: (-9.816,-2.281,-98.837)
C3': (-10.390,-5.905,-95.604)
C1': (-12.664,-5.964,-95.095)
C5': (-10.140,-3.371,-95.227)
O6: (-16.066,-7.330,-99.781)
O4': (-12.201,-4.651,-94.808)
C8: (-13.250,-5.175,-97.448)
C2: (-15.578,-8.771,-96.573)
C6: (-15.614,-7.476,-98.647)
C5: (-14.665,-6.656,-98.005)
C4: (-14.276,-6.972,-96.734)
P: (-9.933,-1.856,-97.418)
C4': (-10.749,-4.685,-94.757)
C2': (-11.451,-6.890,-95.148)
O2': (-11.172,-7.468,-93.889)
N1: (-16.036,-8.538,-97.849)
N2: (-16.069,-9.830,-95.921)
N3: (-14.689,-8.004,-95.963)
N7: (-14.013,-5.519,-98.448)
N9: (-13.368,-6.013,-96.369)
O5': (-10.582,-3.038,-96.544)
O3': (-9.062,-6.361,-95.344)
Image (generated by PyMOL):