Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0427:0141
Extra
PDB:
ATOM 1 O3' C A 426 55.277 112.978 30.254 1.00 43.24 O
ATOM 2 P A A 427 54.547 113.962 31.283 1.00 44.11 P
ATOM 3 OP1 A A 427 53.912 113.091 32.304 1.00 46.99 O
ATOM 4 OP2 A A 427 53.713 114.918 30.520 1.00 42.63 O
ATOM 5 O5' A A 427 55.748 114.767 31.953 1.00 43.64 O
ATOM 6 C5' A A 427 56.648 114.130 32.881 1.00 40.70 C
ATOM 7 C4' A A 427 57.633 115.137 33.432 1.00 40.78 C
ATOM 8 O4' A A 427 58.546 115.570 32.386 1.00 42.44 O
ATOM 9 C3' A A 427 57.019 116.425 33.942 1.00 39.35 C
ATOM 10 O3' A A 427 56.516 116.273 35.251 1.00 38.39 O
ATOM 11 C2' A A 427 58.187 117.397 33.855 1.00 40.47 C
ATOM 12 O2' A A 427 59.121 117.249 34.902 1.00 40.91 O
ATOM 13 C1' A A 427 58.842 116.951 32.548 1.00 42.18 C
ATOM 14 N9 A A 427 58.301 117.677 31.396 1.00 44.87 N
ATOM 15 C8 A A 427 57.317 117.266 30.524 1.00 44.83 C
ATOM 16 N7 A A 427 57.023 118.152 29.602 1.00 45.02 N
ATOM 17 C5 A A 427 57.871 119.214 29.880 1.00 44.57 C
ATOM 18 C6 A A 427 58.053 120.458 29.263 1.00 43.19 C
ATOM 19 N6 A A 427 57.358 120.866 28.204 1.00 41.69 N
ATOM 20 N1 A A 427 58.987 121.281 29.778 1.00 44.69 N
ATOM 21 C2 A A 427 59.684 120.872 30.844 1.00 44.96 C
ATOM 22 N3 A A 427 59.605 119.730 31.514 1.00 44.20 N
ATOM 23 C4 A A 427 58.669 118.934 30.977 1.00 44.51 C
ATOM 24 P C A 428 55.304 117.201 35.747 1.00 40.15 P
ATOM 25 OP1 C A 428 54.994 116.781 37.141 1.00 40.88 O
ATOM 26 OP2 C A 428 54.236 117.197 34.721 1.00 39.50 O
ATOM 27 O5' C A 428 55.916 118.670 35.804 1.00 41.69 O
TER
ATOM 1 O3' A B 140 61.428 122.549 40.405 1.00 42.78 O
ATOM 2 P C B 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 3 OP1 C B 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 4 OP2 C B 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 5 O5' C B 141 62.211 121.081 38.512 1.00 40.82 O
ATOM 6 C5' C B 141 61.033 120.288 38.273 1.00 39.28 C
ATOM 7 C4' C B 141 60.825 120.090 36.787 1.00 37.51 C
ATOM 8 O4' C B 141 60.553 121.370 36.164 1.00 39.77 O
ATOM 9 C3' C B 141 62.017 119.545 36.018 1.00 37.27 C
ATOM 10 O3' C B 141 62.066 118.127 36.083 1.00 36.75 O
ATOM 11 C2' C B 141 61.727 120.018 34.603 1.00 38.67 C
ATOM 12 O2' C B 141 60.758 119.218 33.965 1.00 41.40 O
ATOM 13 C1' C B 141 61.117 121.395 34.864 1.00 40.22 C
ATOM 14 N1 C B 141 62.091 122.506 34.781 1.00 42.08 N
ATOM 15 C2 C B 141 62.374 123.063 33.526 1.00 40.84 C
ATOM 16 O2 C B 141 61.809 122.607 32.523 1.00 39.61 O
ATOM 17 N3 C B 141 63.253 124.084 33.439 1.00 41.60 N
ATOM 18 C4 C B 141 63.841 124.553 34.538 1.00 41.61 C
ATOM 19 N4 C B 141 64.689 125.568 34.401 1.00 43.49 N
ATOM 20 C5 C B 141 63.582 124.006 35.824 1.00 42.52 C
ATOM 21 C6 C B 141 62.708 122.994 35.901 1.00 43.37 C
ATOM 22 P C B 142 63.479 117.374 36.205 1.00 37.16 P
ATOM 23 OP1 C B 142 63.188 115.921 36.118 1.00 39.44 O
ATOM 24 OP2 C B 142 64.235 117.899 37.361 1.00 37.54 O
ATOM 25 O5' C B 142 64.272 117.803 34.895 1.00 36.45 O
TER
ATOM 2 P A A 427 54.547 113.962 31.283 1.00 44.11 P
ATOM 3 OP1 A A 427 53.912 113.091 32.304 1.00 46.99 O
ATOM 4 OP2 A A 427 53.713 114.918 30.520 1.00 42.63 O
ATOM 5 O5' A A 427 55.748 114.767 31.953 1.00 43.64 O
ATOM 6 C5' A A 427 56.648 114.130 32.881 1.00 40.70 C
ATOM 7 C4' A A 427 57.633 115.137 33.432 1.00 40.78 C
ATOM 8 O4' A A 427 58.546 115.570 32.386 1.00 42.44 O
ATOM 9 C3' A A 427 57.019 116.425 33.942 1.00 39.35 C
ATOM 10 O3' A A 427 56.516 116.273 35.251 1.00 38.39 O
ATOM 11 C2' A A 427 58.187 117.397 33.855 1.00 40.47 C
ATOM 12 O2' A A 427 59.121 117.249 34.902 1.00 40.91 O
ATOM 13 C1' A A 427 58.842 116.951 32.548 1.00 42.18 C
ATOM 14 N9 A A 427 58.301 117.677 31.396 1.00 44.87 N
ATOM 15 C8 A A 427 57.317 117.266 30.524 1.00 44.83 C
ATOM 16 N7 A A 427 57.023 118.152 29.602 1.00 45.02 N
ATOM 17 C5 A A 427 57.871 119.214 29.880 1.00 44.57 C
ATOM 18 C6 A A 427 58.053 120.458 29.263 1.00 43.19 C
ATOM 19 N6 A A 427 57.358 120.866 28.204 1.00 41.69 N
ATOM 20 N1 A A 427 58.987 121.281 29.778 1.00 44.69 N
ATOM 21 C2 A A 427 59.684 120.872 30.844 1.00 44.96 C
ATOM 22 N3 A A 427 59.605 119.730 31.514 1.00 44.20 N
ATOM 23 C4 A A 427 58.669 118.934 30.977 1.00 44.51 C
ATOM 24 P C A 428 55.304 117.201 35.747 1.00 40.15 P
ATOM 25 OP1 C A 428 54.994 116.781 37.141 1.00 40.88 O
ATOM 26 OP2 C A 428 54.236 117.197 34.721 1.00 39.50 O
ATOM 27 O5' C A 428 55.916 118.670 35.804 1.00 41.69 O
TER
ATOM 1 O3' A B 140 61.428 122.549 40.405 1.00 42.78 O
ATOM 2 P C B 141 62.610 121.550 39.981 1.00 41.22 P
ATOM 3 OP1 C B 141 62.528 120.382 40.888 1.00 40.76 O
ATOM 4 OP2 C B 141 63.875 122.323 39.891 1.00 40.89 O
ATOM 5 O5' C B 141 62.211 121.081 38.512 1.00 40.82 O
ATOM 6 C5' C B 141 61.033 120.288 38.273 1.00 39.28 C
ATOM 7 C4' C B 141 60.825 120.090 36.787 1.00 37.51 C
ATOM 8 O4' C B 141 60.553 121.370 36.164 1.00 39.77 O
ATOM 9 C3' C B 141 62.017 119.545 36.018 1.00 37.27 C
ATOM 10 O3' C B 141 62.066 118.127 36.083 1.00 36.75 O
ATOM 11 C2' C B 141 61.727 120.018 34.603 1.00 38.67 C
ATOM 12 O2' C B 141 60.758 119.218 33.965 1.00 41.40 O
ATOM 13 C1' C B 141 61.117 121.395 34.864 1.00 40.22 C
ATOM 14 N1 C B 141 62.091 122.506 34.781 1.00 42.08 N
ATOM 15 C2 C B 141 62.374 123.063 33.526 1.00 40.84 C
ATOM 16 O2 C B 141 61.809 122.607 32.523 1.00 39.61 O
ATOM 17 N3 C B 141 63.253 124.084 33.439 1.00 41.60 N
ATOM 18 C4 C B 141 63.841 124.553 34.538 1.00 41.61 C
ATOM 19 N4 C B 141 64.689 125.568 34.401 1.00 43.49 N
ATOM 20 C5 C B 141 63.582 124.006 35.824 1.00 42.52 C
ATOM 21 C6 C B 141 62.708 122.994 35.901 1.00 43.37 C
ATOM 22 P C B 142 63.479 117.374 36.205 1.00 37.16 P
ATOM 23 OP1 C B 142 63.188 115.921 36.118 1.00 39.44 O
ATOM 24 OP2 C B 142 64.235 117.899 37.361 1.00 37.54 O
ATOM 25 O5' C B 142 64.272 117.803 34.895 1.00 36.45 O
TER
Atoms:
OP1: (53.912,113.091,32.304)
OP2: (53.713,114.918,30.520)
C3': (57.019,116.425,33.942)
C1': (58.842,116.951,32.548)
C5': (56.648,114.130,32.881)
O4': (58.546,115.570,32.386)
C8: (57.317,117.266,30.524)
O2': (59.121,117.249,34.902)
C6: (58.053,120.458,29.263)
C5: (57.871,119.214,29.880)
C4: (58.669,118.934,30.977)
P: (54.547,113.962,31.283)
C4': (57.633,115.137,33.432)
C2': (58.187,117.397,33.855)
C2: (59.684,120.872,30.844)
N1: (58.987,121.281,29.778)
N3: (59.605,119.730,31.514)
N6: (57.358,120.866,28.204)
N7: (57.023,118.152,29.602)
N9: (58.301,117.677,31.396)
O5': (55.748,114.767,31.953)
O3': (56.516,116.273,35.251)
OP2: (53.713,114.918,30.520)
C3': (57.019,116.425,33.942)
C1': (58.842,116.951,32.548)
C5': (56.648,114.130,32.881)
O4': (58.546,115.570,32.386)
C8: (57.317,117.266,30.524)
O2': (59.121,117.249,34.902)
C6: (58.053,120.458,29.263)
C5: (57.871,119.214,29.880)
C4: (58.669,118.934,30.977)
P: (54.547,113.962,31.283)
C4': (57.633,115.137,33.432)
C2': (58.187,117.397,33.855)
C2: (59.684,120.872,30.844)
N1: (58.987,121.281,29.778)
N3: (59.605,119.730,31.514)
N6: (57.358,120.866,28.204)
N7: (57.023,118.152,29.602)
N9: (58.301,117.677,31.396)
O5': (55.748,114.767,31.953)
O3': (56.516,116.273,35.251)
C2: (62.374,123.063,33.526)
OP1: (62.528,120.382,40.888)
OP2: (63.875,122.323,39.891)
C4: (63.841,124.553,34.538)
O5': (62.211,121.081,38.512)
C3': (62.017,119.545,36.018)
C1': (61.117,121.395,34.864)
O4': (60.553,121.370,36.164)
C5': (61.033,120.288,38.273)
P: (62.610,121.550,39.981)
O2: (61.809,122.607,32.523)
C4': (60.825,120.090,36.787)
C2': (61.727,120.018,34.603)
O2': (60.758,119.218,33.965)
N1: (62.091,122.506,34.781)
N3: (63.253,124.084,33.439)
N4: (64.689,125.568,34.401)
C6: (62.708,122.994,35.901)
C5: (63.582,124.006,35.824)
O3': (62.066,118.127,36.083)
OP1: (62.528,120.382,40.888)
OP2: (63.875,122.323,39.891)
C4: (63.841,124.553,34.538)
O5': (62.211,121.081,38.512)
C3': (62.017,119.545,36.018)
C1': (61.117,121.395,34.864)
O4': (60.553,121.370,36.164)
C5': (61.033,120.288,38.273)
P: (62.610,121.550,39.981)
O2: (61.809,122.607,32.523)
C4': (60.825,120.090,36.787)
C2': (61.727,120.018,34.603)
O2': (60.758,119.218,33.965)
N1: (62.091,122.506,34.781)
N3: (63.253,124.084,33.439)
N4: (64.689,125.568,34.401)
C6: (62.708,122.994,35.901)
C5: (63.582,124.006,35.824)
O3': (62.066,118.127,36.083)
Image (generated by PyMOL):