ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6354:6355

Extra

PDB:
ATOM 1 O3' G A 353 219.831 42.587 239.450 1.00 46.27 O
ATOM 2 P U A 354 219.563 43.700 240.555 1.00 48.47 P
ATOM 3 OP1 U A 354 218.908 43.033 241.674 1.00 48.34 O
ATOM 4 OP2 U A 354 218.904 44.836 239.887 1.00 48.50 O
ATOM 5 O5' U A 354 221.008 44.102 240.989 1.00 48.66 O
ATOM 6 C5' U A 354 221.870 43.147 241.562 1.00 48.70 C
ATOM 7 C4' U A 354 223.207 43.742 241.795 1.00 48.95 C
ATOM 8 O4' U A 354 223.877 43.959 240.525 1.00 49.08 O
ATOM 9 C3' U A 354 223.186 45.111 242.409 1.00 49.06 C
ATOM 10 O3' U A 354 222.900 45.063 243.801 1.00 49.05 O
ATOM 11 C2' U A 354 224.580 45.621 242.029 1.00 49.35 C
ATOM 12 O2' U A 354 225.577 44.951 242.772 1.00 49.47 O
ATOM 13 C1' U A 354 224.680 45.119 240.598 1.00 49.33 C
ATOM 14 N1 U A 354 224.162 46.093 239.626 1.00 49.36 N
ATOM 15 C2 U A 354 225.000 47.057 239.126 1.00 49.64 C
ATOM 16 O2 U A 354 226.127 47.078 239.498 1.00 49.85 O
ATOM 17 N3 U A 354 224.484 47.957 238.214 1.00 49.70 N
ATOM 18 C4 U A 354 223.176 47.939 237.767 1.00 49.50 C
ATOM 19 O4 U A 354 222.758 48.750 236.964 1.00 49.59 O
ATOM 20 C5 U A 354 222.375 46.906 238.324 1.00 49.22 C
ATOM 21 C6 U A 354 222.859 46.033 239.207 1.00 49.15 C
ATOM 22 P A A 355 222.172 46.280 244.573 1.00 65.36 P
ATOM 23 OP1 A A 355 220.857 45.806 244.993 1.00 65.15 O
ATOM 24 OP2 A A 355 222.250 47.480 243.708 1.00 65.47 O
ATOM 25 O5' A A 355 223.113 46.452 245.846 1.00 65.60 O
TER

ATOM 1 O3' U B 354 222.900 45.063 243.801 1.00 49.05 O
ATOM 2 P A B 355 222.172 46.280 244.573 1.00 65.36 P
ATOM 3 OP1 A B 355 220.857 45.806 244.993 1.00 65.15 O
ATOM 4 OP2 A B 355 222.250 47.480 243.708 1.00 65.47 O
ATOM 5 O5' A B 355 223.113 46.452 245.846 1.00 65.60 O
ATOM 6 C5' A B 355 222.638 46.198 247.148 1.00 65.60 C
ATOM 7 C4' A B 355 223.529 45.255 247.907 1.00 65.73 C
ATOM 8 O4' A B 355 222.755 44.107 248.264 1.00 65.54 O
ATOM 9 C3' A B 355 224.760 44.696 247.179 1.00 65.81 C
ATOM 10 O3' A B 355 225.918 45.462 247.404 1.00 66.13 O
ATOM 11 C2' A B 355 224.916 43.325 247.786 1.00 65.79 C
ATOM 12 O2' A B 355 225.604 43.428 249.017 1.00 66.06 O
ATOM 13 C1' A B 355 223.498 42.942 248.095 1.00 65.55 C
ATOM 14 N9 A B 355 222.885 42.140 247.034 1.00 65.30 N
ATOM 15 C8 A B 355 223.082 41.940 245.692 1.00 65.21 C
ATOM 16 N7 A B 355 222.237 41.071 245.174 1.00 65.01 N
ATOM 17 C5 A B 355 221.438 40.703 246.275 1.00 64.96 C
ATOM 18 C6 A B 355 220.338 39.819 246.502 1.00 64.81 C
ATOM 19 N6 A B 355 219.721 39.044 245.564 1.00 64.65 N
ATOM 20 N1 A B 355 219.862 39.746 247.793 1.00 64.87 N
ATOM 21 C2 A B 355 220.369 40.470 248.802 1.00 65.07 C
ATOM 22 N3 A B 355 221.363 41.311 248.707 1.00 65.21 N
ATOM 23 C4 A B 355 221.844 41.364 247.426 1.00 65.14 C
ATOM 24 P A B 356 226.817 46.012 246.190 1.00 46.25 P
ATOM 25 OP1 A B 356 227.027 44.914 245.227 1.00 46.12 O
ATOM 26 OP2 A B 356 228.033 46.671 246.821 1.00 46.64 O
ATOM 27 O5' A B 356 225.853 47.116 245.589 1.00 46.14 O
TER

Atoms:
C4: (223.176,47.939,237.767)
N3: (224.484,47.957,238.214)
OP1: (218.908,43.033,241.674)
OP2: (218.904,44.836,239.887)
C2: (225.000,47.057,239.126)
C1': (224.680,45.119,240.598)
C3': (223.186,45.111,242.409)
O5': (221.008,44.102,240.989)
O4': (223.877,43.959,240.525)
C5': (221.870,43.147,241.562)
P: (219.563,43.700,240.555)
C4': (223.207,43.742,241.795)
C2': (224.580,45.621,242.029)
O2': (225.577,44.951,242.772)
N1: (224.162,46.093,239.626)
O4: (222.758,48.750,236.964)
O2: (226.127,47.078,239.498)
C6: (222.859,46.033,239.207)
C5: (222.375,46.906,238.324)
O3': (222.900,45.063,243.801)
OP1: (220.857,45.806,244.993)
OP2: (222.250,47.480,243.708)
C3': (224.760,44.696,247.179)
C1': (223.498,42.942,248.095)
C5': (222.638,46.198,247.148)
O4': (222.755,44.107,248.264)
C8: (223.082,41.940,245.692)
O2': (225.604,43.428,249.017)
C6: (220.338,39.819,246.502)
C5: (221.438,40.703,246.275)
C4: (221.844,41.364,247.426)
P: (222.172,46.280,244.573)
C4': (223.529,45.255,247.907)
C2': (224.916,43.325,247.786)
C2: (220.369,40.470,248.802)
N1: (219.862,39.746,247.793)
N3: (221.363,41.311,248.707)
N6: (219.721,39.044,245.564)
N7: (222.237,41.071,245.174)
N9: (222.885,42.140,247.034)
O5': (223.113,46.452,245.846)
O3': (225.918,45.462,247.404)
Image (generated by PyMOL):
PyMOL image
show in jmol