Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:5341:5337
Extra
PDB:
ATOM 1 O3' U A 340 116.625 0.092 204.105 1.00 37.01 O
ATOM 2 P A A 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A A 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A A 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A A 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A A 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A A 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A A 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A A 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A A 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A A 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A A 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A A 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A A 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A A 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A A 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A A 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A A 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A A 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A A 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A A 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A A 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A A 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G A 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G A 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G A 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G A 342 115.166 -6.474 200.877 1.00 43.72 O
TER
ATOM 1 O3' C B 336 107.154 -12.546 201.741 1.00 43.72 O
ATOM 2 P C B 337 106.925 -11.016 202.150 1.00 40.23 P
ATOM 3 OP1 C B 337 107.201 -10.973 203.490 1.00 39.80 O
ATOM 4 OP2 C B 337 105.600 -10.580 201.696 1.00 40.57 O
ATOM 5 O5' C B 337 108.053 -10.225 201.375 1.00 40.15 O
ATOM 6 C5' C B 337 109.220 -9.776 202.054 1.00 39.69 C
ATOM 7 C4' C B 337 109.720 -8.510 201.448 1.00 39.64 C
ATOM 8 O4' C B 337 110.057 -8.746 200.073 1.00 40.00 O
ATOM 9 C3' C B 337 108.722 -7.376 201.379 1.00 39.73 C
ATOM 10 O3' C B 337 108.620 -6.702 202.604 1.00 39.34 O
ATOM 11 C2' C B 337 109.282 -6.515 200.249 1.00 39.87 C
ATOM 12 O2' C B 337 110.342 -5.692 200.726 1.00 39.46 O
ATOM 13 C1' C B 337 109.887 -7.567 199.332 1.00 40.13 C
ATOM 14 N1 C B 337 109.071 -7.868 198.166 1.00 40.65 N
ATOM 15 C2 C B 337 109.228 -7.075 197.013 1.00 40.90 C
ATOM 16 O2 C B 337 109.987 -6.113 197.061 1.00 40.66 O
ATOM 17 N3 C B 337 108.564 -7.302 195.874 1.00 41.39 N
ATOM 18 C4 C B 337 107.765 -8.348 195.897 1.00 41.64 C
ATOM 19 N4 C B 337 107.128 -8.588 194.772 1.00 42.14 N
ATOM 20 C5 C B 337 107.605 -9.213 197.042 1.00 41.41 C
ATOM 21 C6 C B 337 108.292 -8.967 198.171 1.00 40.91 C
ATOM 22 P G B 338 107.346 -5.801 202.975 1.00 45.68 P
ATOM 23 OP1 G B 338 107.610 -5.218 204.342 1.00 45.21 O
ATOM 24 OP2 G B 338 106.142 -6.639 202.794 1.00 46.03 O
ATOM 25 O5' G B 338 107.390 -4.645 201.887 1.00 45.87 O
TER
ATOM 2 P A A 341 117.035 -1.228 203.329 1.00 38.58 P
ATOM 3 OP1 A A 341 117.943 -2.023 204.218 1.00 38.26 O
ATOM 4 OP2 A A 341 117.528 -0.836 201.981 1.00 38.85 O
ATOM 5 O5' A A 341 115.661 -1.950 203.226 1.00 38.86 O
ATOM 6 C5' A A 341 115.194 -2.756 204.276 1.00 38.71 C
ATOM 7 C4' A A 341 113.971 -3.462 203.844 1.00 39.07 C
ATOM 8 O4' A A 341 113.083 -2.504 203.227 1.00 39.31 O
ATOM 9 C3' A A 341 114.178 -4.467 202.758 1.00 39.41 C
ATOM 10 O3' A A 341 114.723 -5.697 203.214 1.00 39.31 O
ATOM 11 C2' A A 341 112.788 -4.565 202.150 1.00 39.82 C
ATOM 12 O2' A A 341 111.922 -5.291 203.009 1.00 39.78 O
ATOM 13 C1' A A 341 112.362 -3.106 202.201 1.00 39.76 C
ATOM 14 N9 A A 341 112.649 -2.377 200.966 1.00 40.00 N
ATOM 15 C8 A A 341 113.499 -1.358 200.892 1.00 39.81 C
ATOM 16 N7 A A 341 113.555 -0.812 199.708 1.00 40.11 N
ATOM 17 C5 A A 341 112.632 -1.501 198.967 1.00 40.52 C
ATOM 18 C6 A A 341 112.265 -1.405 197.636 1.00 40.98 C
ATOM 19 N6 A A 341 112.746 -0.538 196.767 1.00 41.11 N
ATOM 20 N1 A A 341 111.358 -2.277 197.209 1.00 41.32 N
ATOM 21 C2 A A 341 110.866 -3.172 198.069 1.00 41.21 C
ATOM 22 N3 A A 341 111.155 -3.350 199.334 1.00 40.80 N
ATOM 23 C4 A A 341 112.059 -2.465 199.729 1.00 40.46 C
ATOM 24 P G A 342 115.865 -6.381 202.321 1.00 43.19 P
ATOM 25 OP1 G A 342 116.134 -7.749 202.867 1.00 43.13 O
ATOM 26 OP2 G A 342 116.951 -5.418 202.243 1.00 42.96 O
ATOM 27 O5' G A 342 115.166 -6.474 200.877 1.00 43.72 O
TER
ATOM 1 O3' C B 336 107.154 -12.546 201.741 1.00 43.72 O
ATOM 2 P C B 337 106.925 -11.016 202.150 1.00 40.23 P
ATOM 3 OP1 C B 337 107.201 -10.973 203.490 1.00 39.80 O
ATOM 4 OP2 C B 337 105.600 -10.580 201.696 1.00 40.57 O
ATOM 5 O5' C B 337 108.053 -10.225 201.375 1.00 40.15 O
ATOM 6 C5' C B 337 109.220 -9.776 202.054 1.00 39.69 C
ATOM 7 C4' C B 337 109.720 -8.510 201.448 1.00 39.64 C
ATOM 8 O4' C B 337 110.057 -8.746 200.073 1.00 40.00 O
ATOM 9 C3' C B 337 108.722 -7.376 201.379 1.00 39.73 C
ATOM 10 O3' C B 337 108.620 -6.702 202.604 1.00 39.34 O
ATOM 11 C2' C B 337 109.282 -6.515 200.249 1.00 39.87 C
ATOM 12 O2' C B 337 110.342 -5.692 200.726 1.00 39.46 O
ATOM 13 C1' C B 337 109.887 -7.567 199.332 1.00 40.13 C
ATOM 14 N1 C B 337 109.071 -7.868 198.166 1.00 40.65 N
ATOM 15 C2 C B 337 109.228 -7.075 197.013 1.00 40.90 C
ATOM 16 O2 C B 337 109.987 -6.113 197.061 1.00 40.66 O
ATOM 17 N3 C B 337 108.564 -7.302 195.874 1.00 41.39 N
ATOM 18 C4 C B 337 107.765 -8.348 195.897 1.00 41.64 C
ATOM 19 N4 C B 337 107.128 -8.588 194.772 1.00 42.14 N
ATOM 20 C5 C B 337 107.605 -9.213 197.042 1.00 41.41 C
ATOM 21 C6 C B 337 108.292 -8.967 198.171 1.00 40.91 C
ATOM 22 P G B 338 107.346 -5.801 202.975 1.00 45.68 P
ATOM 23 OP1 G B 338 107.610 -5.218 204.342 1.00 45.21 O
ATOM 24 OP2 G B 338 106.142 -6.639 202.794 1.00 46.03 O
ATOM 25 O5' G B 338 107.390 -4.645 201.887 1.00 45.87 O
TER
Atoms:
OP1: (117.943,-2.023,204.218)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
OP2: (117.528,-0.836,201.981)
C3': (114.178,-4.467,202.758)
C1': (112.362,-3.106,202.201)
C5': (115.194,-2.756,204.276)
O4': (113.083,-2.504,203.227)
C8: (113.499,-1.358,200.892)
O2': (111.922,-5.291,203.009)
C6: (112.265,-1.405,197.636)
C5: (112.632,-1.501,198.967)
C4: (112.059,-2.465,199.729)
P: (117.035,-1.228,203.329)
C4': (113.971,-3.462,203.844)
C2': (112.788,-4.565,202.150)
C2: (110.866,-3.172,198.069)
N1: (111.358,-2.277,197.209)
N3: (111.155,-3.350,199.334)
N6: (112.746,-0.538,196.767)
N7: (113.555,-0.812,199.708)
N9: (112.649,-2.377,200.966)
O5': (115.661,-1.950,203.226)
O3': (114.723,-5.697,203.214)
C2: (109.228,-7.075,197.013)
OP1: (107.201,-10.973,203.490)
OP2: (105.600,-10.580,201.696)
C4: (107.765,-8.348,195.897)
O5': (108.053,-10.225,201.375)
C3': (108.722,-7.376,201.379)
C1': (109.887,-7.567,199.332)
O4': (110.057,-8.746,200.073)
C5': (109.220,-9.776,202.054)
P: (106.925,-11.016,202.150)
O2: (109.987,-6.113,197.061)
C4': (109.720,-8.510,201.448)
C2': (109.282,-6.515,200.249)
O2': (110.342,-5.692,200.726)
N1: (109.071,-7.868,198.166)
N3: (108.564,-7.302,195.874)
N4: (107.128,-8.588,194.772)
C6: (108.292,-8.967,198.171)
C5: (107.605,-9.213,197.042)
O3': (108.620,-6.702,202.604)
OP1: (107.201,-10.973,203.490)
OP2: (105.600,-10.580,201.696)
C4: (107.765,-8.348,195.897)
O5': (108.053,-10.225,201.375)
C3': (108.722,-7.376,201.379)
C1': (109.887,-7.567,199.332)
O4': (110.057,-8.746,200.073)
C5': (109.220,-9.776,202.054)
P: (106.925,-11.016,202.150)
O2: (109.987,-6.113,197.061)
C4': (109.720,-8.510,201.448)
C2': (109.282,-6.515,200.249)
O2': (110.342,-5.692,200.726)
N1: (109.071,-7.868,198.166)
N3: (108.564,-7.302,195.874)
N4: (107.128,-8.588,194.772)
C6: (108.292,-8.967,198.171)
C5: (107.605,-9.213,197.042)
O3': (108.620,-6.702,202.604)
Image (generated by PyMOL):