Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A283:A344
Extra
PDB:
ATOM 1 O3' C A 282 41.115 123.845 6.677 1.00 84.26 O
ATOM 2 P C A 283 40.438 124.178 8.083 1.00 85.56 P
ATOM 3 OP1 C A 283 39.024 124.569 7.864 1.00 86.30 O
ATOM 4 OP2 C A 283 41.365 125.118 8.771 1.00 86.61 O
ATOM 5 O5' C A 283 40.458 122.780 8.844 1.00 85.44 O
ATOM 6 C5' C A 283 39.580 121.718 8.447 1.00 84.93 C
ATOM 7 C4' C A 283 39.830 120.498 9.292 1.00 84.57 C
ATOM 8 O4' C A 283 41.192 120.047 9.066 1.00 84.58 O
ATOM 9 C3' C A 283 39.762 120.712 10.796 1.00 83.65 C
ATOM 10 O3' C A 283 38.426 120.706 11.289 1.00 82.48 O
ATOM 11 C2' C A 283 40.604 119.552 11.311 1.00 84.05 C
ATOM 12 O2' C A 283 39.939 118.307 11.308 1.00 83.20 O
ATOM 13 C1' C A 283 41.723 119.517 10.269 1.00 84.60 C
ATOM 14 N1 C A 283 42.865 120.347 10.688 1.00 85.84 N
ATOM 15 C2 C A 283 43.868 119.755 11.456 1.00 86.57 C
ATOM 16 O2 C A 283 43.789 118.539 11.727 1.00 85.99 O
ATOM 17 N3 C A 283 44.902 120.514 11.883 1.00 87.54 N
ATOM 18 C4 C A 283 44.962 121.808 11.563 1.00 87.39 C
ATOM 19 N4 C A 283 46.005 122.508 12.011 1.00 88.03 N
ATOM 20 C5 C A 283 43.962 122.435 10.770 1.00 86.40 C
ATOM 21 C6 C A 283 42.942 121.675 10.355 1.00 85.87 C
ATOM 22 P G A 284 38.061 121.542 12.615 1.00 81.55 P
ATOM 23 OP1 G A 284 36.694 121.137 13.019 1.00 82.39 O
ATOM 24 OP2 G A 284 38.362 122.978 12.385 1.00 80.05 O
ATOM 25 O5' G A 284 39.057 120.964 13.718 1.00 81.87 O
TER
ATOM 1 O3' C B 343 53.563 126.186 18.152 1.00 65.27 O
ATOM 2 P C B 344 54.358 125.498 16.933 1.00 65.90 P
ATOM 3 OP1 C B 344 55.636 124.924 17.450 1.00 63.58 O
ATOM 4 OP2 C B 344 54.385 126.485 15.819 1.00 67.00 O
ATOM 5 O5' C B 344 53.440 124.268 16.517 1.00 66.44 O
ATOM 6 C5' C B 344 53.217 123.172 17.427 1.00 67.95 C
ATOM 7 C4' C B 344 52.171 122.242 16.864 1.00 68.51 C
ATOM 8 O4' C B 344 50.923 122.960 16.667 1.00 68.83 O
ATOM 9 C3' C B 344 52.494 121.685 15.493 1.00 69.10 C
ATOM 10 O3' C B 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 11 C2' C B 344 51.115 121.312 14.968 1.00 69.31 C
ATOM 12 O2' C B 344 50.657 120.103 15.539 1.00 69.97 O
ATOM 13 C1' C B 344 50.267 122.471 15.507 1.00 69.64 C
ATOM 14 N1 C B 344 50.077 123.600 14.567 1.00 70.77 N
ATOM 15 C2 C B 344 48.964 123.595 13.696 1.00 71.00 C
ATOM 16 O2 C B 344 48.151 122.661 13.756 1.00 71.87 O
ATOM 17 N3 C B 344 48.806 124.617 12.819 1.00 70.63 N
ATOM 18 C4 C B 344 49.692 125.621 12.792 1.00 70.57 C
ATOM 19 N4 C B 344 49.509 126.605 11.902 1.00 70.11 N
ATOM 20 C5 C B 344 50.812 125.661 13.673 1.00 70.67 C
ATOM 21 C6 C B 344 50.967 124.641 14.534 1.00 71.45 C
ATOM 22 P A B 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 23 OP1 A B 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 24 OP2 A B 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 25 O5' A B 345 55.181 121.591 14.198 1.00 71.37 O
TER
ATOM 2 P C A 283 40.438 124.178 8.083 1.00 85.56 P
ATOM 3 OP1 C A 283 39.024 124.569 7.864 1.00 86.30 O
ATOM 4 OP2 C A 283 41.365 125.118 8.771 1.00 86.61 O
ATOM 5 O5' C A 283 40.458 122.780 8.844 1.00 85.44 O
ATOM 6 C5' C A 283 39.580 121.718 8.447 1.00 84.93 C
ATOM 7 C4' C A 283 39.830 120.498 9.292 1.00 84.57 C
ATOM 8 O4' C A 283 41.192 120.047 9.066 1.00 84.58 O
ATOM 9 C3' C A 283 39.762 120.712 10.796 1.00 83.65 C
ATOM 10 O3' C A 283 38.426 120.706 11.289 1.00 82.48 O
ATOM 11 C2' C A 283 40.604 119.552 11.311 1.00 84.05 C
ATOM 12 O2' C A 283 39.939 118.307 11.308 1.00 83.20 O
ATOM 13 C1' C A 283 41.723 119.517 10.269 1.00 84.60 C
ATOM 14 N1 C A 283 42.865 120.347 10.688 1.00 85.84 N
ATOM 15 C2 C A 283 43.868 119.755 11.456 1.00 86.57 C
ATOM 16 O2 C A 283 43.789 118.539 11.727 1.00 85.99 O
ATOM 17 N3 C A 283 44.902 120.514 11.883 1.00 87.54 N
ATOM 18 C4 C A 283 44.962 121.808 11.563 1.00 87.39 C
ATOM 19 N4 C A 283 46.005 122.508 12.011 1.00 88.03 N
ATOM 20 C5 C A 283 43.962 122.435 10.770 1.00 86.40 C
ATOM 21 C6 C A 283 42.942 121.675 10.355 1.00 85.87 C
ATOM 22 P G A 284 38.061 121.542 12.615 1.00 81.55 P
ATOM 23 OP1 G A 284 36.694 121.137 13.019 1.00 82.39 O
ATOM 24 OP2 G A 284 38.362 122.978 12.385 1.00 80.05 O
ATOM 25 O5' G A 284 39.057 120.964 13.718 1.00 81.87 O
TER
ATOM 1 O3' C B 343 53.563 126.186 18.152 1.00 65.27 O
ATOM 2 P C B 344 54.358 125.498 16.933 1.00 65.90 P
ATOM 3 OP1 C B 344 55.636 124.924 17.450 1.00 63.58 O
ATOM 4 OP2 C B 344 54.385 126.485 15.819 1.00 67.00 O
ATOM 5 O5' C B 344 53.440 124.268 16.517 1.00 66.44 O
ATOM 6 C5' C B 344 53.217 123.172 17.427 1.00 67.95 C
ATOM 7 C4' C B 344 52.171 122.242 16.864 1.00 68.51 C
ATOM 8 O4' C B 344 50.923 122.960 16.667 1.00 68.83 O
ATOM 9 C3' C B 344 52.494 121.685 15.493 1.00 69.10 C
ATOM 10 O3' C B 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 11 C2' C B 344 51.115 121.312 14.968 1.00 69.31 C
ATOM 12 O2' C B 344 50.657 120.103 15.539 1.00 69.97 O
ATOM 13 C1' C B 344 50.267 122.471 15.507 1.00 69.64 C
ATOM 14 N1 C B 344 50.077 123.600 14.567 1.00 70.77 N
ATOM 15 C2 C B 344 48.964 123.595 13.696 1.00 71.00 C
ATOM 16 O2 C B 344 48.151 122.661 13.756 1.00 71.87 O
ATOM 17 N3 C B 344 48.806 124.617 12.819 1.00 70.63 N
ATOM 18 C4 C B 344 49.692 125.621 12.792 1.00 70.57 C
ATOM 19 N4 C B 344 49.509 126.605 11.902 1.00 70.11 N
ATOM 20 C5 C B 344 50.812 125.661 13.673 1.00 70.67 C
ATOM 21 C6 C B 344 50.967 124.641 14.534 1.00 71.45 C
ATOM 22 P A B 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 23 OP1 A B 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 24 OP2 A B 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 25 O5' A B 345 55.181 121.591 14.198 1.00 71.37 O
TER
Atoms:
C2: (43.868,119.755,11.456)
OP1: (39.024,124.569,7.864)
OP2: (41.365,125.118,8.771)
C4: (44.962,121.808,11.563)
O5': (40.458,122.780,8.844)
C3': (39.762,120.712,10.796)
C1': (41.723,119.517,10.269)
O4': (41.192,120.047,9.066)
C5': (39.580,121.718,8.447)
P: (40.438,124.178,8.083)
O2: (43.789,118.539,11.727)
C4': (39.830,120.498,9.292)
C2': (40.604,119.552,11.311)
O2': (39.939,118.307,11.308)
N1: (42.865,120.347,10.688)
N3: (44.902,120.514,11.883)
N4: (46.005,122.508,12.011)
C6: (42.942,121.675,10.355)
C5: (43.962,122.435,10.770)
O3': (38.426,120.706,11.289)
OP1: (39.024,124.569,7.864)
OP2: (41.365,125.118,8.771)
C4: (44.962,121.808,11.563)
O5': (40.458,122.780,8.844)
C3': (39.762,120.712,10.796)
C1': (41.723,119.517,10.269)
O4': (41.192,120.047,9.066)
C5': (39.580,121.718,8.447)
P: (40.438,124.178,8.083)
O2: (43.789,118.539,11.727)
C4': (39.830,120.498,9.292)
C2': (40.604,119.552,11.311)
O2': (39.939,118.307,11.308)
N1: (42.865,120.347,10.688)
N3: (44.902,120.514,11.883)
N4: (46.005,122.508,12.011)
C6: (42.942,121.675,10.355)
C5: (43.962,122.435,10.770)
O3': (38.426,120.706,11.289)
C2: (48.964,123.595,13.696)
OP1: (55.636,124.924,17.450)
OP2: (54.385,126.485,15.819)
C4: (49.692,125.621,12.792)
O5': (53.440,124.268,16.517)
C3': (52.494,121.685,15.493)
C1': (50.267,122.471,15.507)
O4': (50.923,122.960,16.667)
C5': (53.217,123.172,17.427)
P: (54.358,125.498,16.933)
O2: (48.151,122.661,13.756)
C4': (52.171,122.242,16.864)
C2': (51.115,121.312,14.968)
O2': (50.657,120.103,15.539)
N1: (50.077,123.600,14.567)
N3: (48.806,124.617,12.819)
N4: (49.509,126.605,11.902)
C6: (50.967,124.641,14.534)
C5: (50.812,125.661,13.673)
O3': (53.371,120.572,15.624)
OP1: (55.636,124.924,17.450)
OP2: (54.385,126.485,15.819)
C4: (49.692,125.621,12.792)
O5': (53.440,124.268,16.517)
C3': (52.494,121.685,15.493)
C1': (50.267,122.471,15.507)
O4': (50.923,122.960,16.667)
C5': (53.217,123.172,17.427)
P: (54.358,125.498,16.933)
O2: (48.151,122.661,13.756)
C4': (52.171,122.242,16.864)
C2': (51.115,121.312,14.968)
O2': (50.657,120.103,15.539)
N1: (50.077,123.600,14.567)
N3: (48.806,124.617,12.819)
N4: (49.509,126.605,11.902)
C6: (50.967,124.641,14.534)
C5: (50.812,125.661,13.673)
O3': (53.371,120.572,15.624)
Image (generated by PyMOL):