Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:02078:02107
Extra
PDB:
ATOM 1 O3' G A2077 107.140 105.474 33.464 1.00 56.06 O
ATOM 2 P C A2078 108.563 105.865 32.811 1.00 55.55 P
ATOM 3 OP1 C A2078 108.424 105.660 31.348 1.00 55.29 O
ATOM 4 OP2 C A2078 109.645 105.170 33.559 1.00 52.78 O
ATOM 5 O5' C A2078 108.699 107.426 33.080 1.00 54.53 O
ATOM 6 C5' C A2078 107.751 108.351 32.519 1.00 52.91 C
ATOM 7 C4' C A2078 107.914 109.708 33.153 1.00 52.23 C
ATOM 8 O4' C A2078 107.617 109.620 34.569 1.00 51.62 O
ATOM 9 C3' C A2078 109.317 110.288 33.107 1.00 53.03 C
ATOM 10 O3' C A2078 109.546 110.891 31.842 1.00 55.93 O
ATOM 11 C2' C A2078 109.285 111.289 34.253 1.00 51.43 C
ATOM 12 O2' C A2078 108.604 112.482 33.913 1.00 51.96 O
ATOM 13 C1' C A2078 108.442 110.529 35.281 1.00 50.91 C
ATOM 14 N1 C A2078 109.230 109.772 36.271 1.00 48.98 N
ATOM 15 C2 C A2078 109.668 110.434 37.425 1.00 48.50 C
ATOM 16 O2 C A2078 109.402 111.641 37.564 1.00 49.26 O
ATOM 17 N3 C A2078 110.370 109.745 38.357 1.00 47.90 N
ATOM 18 C4 C A2078 110.647 108.454 38.162 1.00 46.58 C
ATOM 19 N4 C A2078 111.339 107.814 39.109 1.00 47.35 N
ATOM 20 C5 C A2078 110.227 107.761 36.988 1.00 45.51 C
ATOM 21 C6 C A2078 109.526 108.449 36.080 1.00 46.34 C
ATOM 22 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 23 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 24 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 25 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
TER
ATOM 1 O3' A B2106 112.778 113.838 47.687 1.00 58.92 O
ATOM 2 P C B2107 111.209 113.492 47.754 1.00 60.95 P
ATOM 3 OP1 C B2107 110.776 113.734 49.160 1.00 60.89 O
ATOM 4 OP2 C B2107 110.982 112.158 47.135 1.00 58.76 O
ATOM 5 O5' C B2107 110.538 114.596 46.822 1.00 56.86 O
ATOM 6 C5' C B2107 110.579 115.987 47.189 1.00 53.17 C
ATOM 7 C4' C B2107 110.061 116.838 46.059 1.00 49.75 C
ATOM 8 O4' C B2107 110.875 116.599 44.884 1.00 49.34 O
ATOM 9 C3' C B2107 108.654 116.511 45.591 1.00 50.25 C
ATOM 10 O3' C B2107 107.668 117.135 46.406 1.00 49.07 O
ATOM 11 C2' C B2107 108.653 117.056 44.172 1.00 48.95 C
ATOM 12 O2' C B2107 108.478 118.455 44.147 1.00 49.14 O
ATOM 13 C1' C B2107 110.073 116.707 43.719 1.00 47.90 C
ATOM 14 N1 C B2107 110.158 115.446 42.952 1.00 45.20 N
ATOM 15 C2 C B2107 109.683 115.436 41.639 1.00 44.99 C
ATOM 16 O2 C B2107 109.226 116.487 41.160 1.00 46.59 O
ATOM 17 N3 C B2107 109.734 114.288 40.922 1.00 43.73 N
ATOM 18 C4 C B2107 110.243 113.182 41.469 1.00 42.19 C
ATOM 19 N4 C B2107 110.264 112.068 40.725 1.00 41.54 N
ATOM 20 C5 C B2107 110.748 113.166 42.801 1.00 41.93 C
ATOM 21 C6 C B2107 110.684 114.309 43.501 1.00 44.29 C
ATOM 22 P C B2108 106.451 116.263 46.989 1.00 47.31 P
ATOM 23 OP1 C B2108 105.683 117.167 47.882 1.00 46.95 O
ATOM 24 OP2 C B2108 107.011 114.995 47.534 1.00 45.35 O
ATOM 25 O5' C B2108 105.565 115.939 45.703 1.00 44.69 O
TER
ATOM 2 P C A2078 108.563 105.865 32.811 1.00 55.55 P
ATOM 3 OP1 C A2078 108.424 105.660 31.348 1.00 55.29 O
ATOM 4 OP2 C A2078 109.645 105.170 33.559 1.00 52.78 O
ATOM 5 O5' C A2078 108.699 107.426 33.080 1.00 54.53 O
ATOM 6 C5' C A2078 107.751 108.351 32.519 1.00 52.91 C
ATOM 7 C4' C A2078 107.914 109.708 33.153 1.00 52.23 C
ATOM 8 O4' C A2078 107.617 109.620 34.569 1.00 51.62 O
ATOM 9 C3' C A2078 109.317 110.288 33.107 1.00 53.03 C
ATOM 10 O3' C A2078 109.546 110.891 31.842 1.00 55.93 O
ATOM 11 C2' C A2078 109.285 111.289 34.253 1.00 51.43 C
ATOM 12 O2' C A2078 108.604 112.482 33.913 1.00 51.96 O
ATOM 13 C1' C A2078 108.442 110.529 35.281 1.00 50.91 C
ATOM 14 N1 C A2078 109.230 109.772 36.271 1.00 48.98 N
ATOM 15 C2 C A2078 109.668 110.434 37.425 1.00 48.50 C
ATOM 16 O2 C A2078 109.402 111.641 37.564 1.00 49.26 O
ATOM 17 N3 C A2078 110.370 109.745 38.357 1.00 47.90 N
ATOM 18 C4 C A2078 110.647 108.454 38.162 1.00 46.58 C
ATOM 19 N4 C A2078 111.339 107.814 39.109 1.00 47.35 N
ATOM 20 C5 C A2078 110.227 107.761 36.988 1.00 45.51 C
ATOM 21 C6 C A2078 109.526 108.449 36.080 1.00 46.34 C
ATOM 22 P U A2079 111.036 110.992 31.246 1.00 57.80 P
ATOM 23 OP1 U A2079 111.654 112.203 31.846 1.00 56.71 O
ATOM 24 OP2 U A2079 110.925 110.876 29.762 1.00 56.25 O
ATOM 25 O5' U A2079 111.815 109.709 31.776 1.00 54.85 O
TER
ATOM 1 O3' A B2106 112.778 113.838 47.687 1.00 58.92 O
ATOM 2 P C B2107 111.209 113.492 47.754 1.00 60.95 P
ATOM 3 OP1 C B2107 110.776 113.734 49.160 1.00 60.89 O
ATOM 4 OP2 C B2107 110.982 112.158 47.135 1.00 58.76 O
ATOM 5 O5' C B2107 110.538 114.596 46.822 1.00 56.86 O
ATOM 6 C5' C B2107 110.579 115.987 47.189 1.00 53.17 C
ATOM 7 C4' C B2107 110.061 116.838 46.059 1.00 49.75 C
ATOM 8 O4' C B2107 110.875 116.599 44.884 1.00 49.34 O
ATOM 9 C3' C B2107 108.654 116.511 45.591 1.00 50.25 C
ATOM 10 O3' C B2107 107.668 117.135 46.406 1.00 49.07 O
ATOM 11 C2' C B2107 108.653 117.056 44.172 1.00 48.95 C
ATOM 12 O2' C B2107 108.478 118.455 44.147 1.00 49.14 O
ATOM 13 C1' C B2107 110.073 116.707 43.719 1.00 47.90 C
ATOM 14 N1 C B2107 110.158 115.446 42.952 1.00 45.20 N
ATOM 15 C2 C B2107 109.683 115.436 41.639 1.00 44.99 C
ATOM 16 O2 C B2107 109.226 116.487 41.160 1.00 46.59 O
ATOM 17 N3 C B2107 109.734 114.288 40.922 1.00 43.73 N
ATOM 18 C4 C B2107 110.243 113.182 41.469 1.00 42.19 C
ATOM 19 N4 C B2107 110.264 112.068 40.725 1.00 41.54 N
ATOM 20 C5 C B2107 110.748 113.166 42.801 1.00 41.93 C
ATOM 21 C6 C B2107 110.684 114.309 43.501 1.00 44.29 C
ATOM 22 P C B2108 106.451 116.263 46.989 1.00 47.31 P
ATOM 23 OP1 C B2108 105.683 117.167 47.882 1.00 46.95 O
ATOM 24 OP2 C B2108 107.011 114.995 47.534 1.00 45.35 O
ATOM 25 O5' C B2108 105.565 115.939 45.703 1.00 44.69 O
TER
Atoms:
C2: (109.668,110.434,37.425)
OP1: (108.424,105.660,31.348)
OP2: (109.645,105.170,33.559)
C4: (110.647,108.454,38.162)
O5': (108.699,107.426,33.080)
C3': (109.317,110.288,33.107)
C1': (108.442,110.529,35.281)
O4': (107.617,109.620,34.569)
C5': (107.751,108.351,32.519)
P: (108.563,105.865,32.811)
O2: (109.402,111.641,37.564)
C4': (107.914,109.708,33.153)
C2': (109.285,111.289,34.253)
O2': (108.604,112.482,33.913)
N1: (109.230,109.772,36.271)
N3: (110.370,109.745,38.357)
N4: (111.339,107.814,39.109)
C6: (109.526,108.449,36.080)
C5: (110.227,107.761,36.988)
O3': (109.546,110.891,31.842)
OP1: (108.424,105.660,31.348)
OP2: (109.645,105.170,33.559)
C4: (110.647,108.454,38.162)
O5': (108.699,107.426,33.080)
C3': (109.317,110.288,33.107)
C1': (108.442,110.529,35.281)
O4': (107.617,109.620,34.569)
C5': (107.751,108.351,32.519)
P: (108.563,105.865,32.811)
O2: (109.402,111.641,37.564)
C4': (107.914,109.708,33.153)
C2': (109.285,111.289,34.253)
O2': (108.604,112.482,33.913)
N1: (109.230,109.772,36.271)
N3: (110.370,109.745,38.357)
N4: (111.339,107.814,39.109)
C6: (109.526,108.449,36.080)
C5: (110.227,107.761,36.988)
O3': (109.546,110.891,31.842)
C2: (109.683,115.436,41.639)
OP1: (110.776,113.734,49.160)
OP2: (110.982,112.158,47.135)
C4: (110.243,113.182,41.469)
O5': (110.538,114.596,46.822)
C3': (108.654,116.511,45.591)
C1': (110.073,116.707,43.719)
O4': (110.875,116.599,44.884)
C5': (110.579,115.987,47.189)
P: (111.209,113.492,47.754)
O2: (109.226,116.487,41.160)
C4': (110.061,116.838,46.059)
C2': (108.653,117.056,44.172)
O2': (108.478,118.455,44.147)
N1: (110.158,115.446,42.952)
N3: (109.734,114.288,40.922)
N4: (110.264,112.068,40.725)
C6: (110.684,114.309,43.501)
C5: (110.748,113.166,42.801)
O3': (107.668,117.135,46.406)
OP1: (110.776,113.734,49.160)
OP2: (110.982,112.158,47.135)
C4: (110.243,113.182,41.469)
O5': (110.538,114.596,46.822)
C3': (108.654,116.511,45.591)
C1': (110.073,116.707,43.719)
O4': (110.875,116.599,44.884)
C5': (110.579,115.987,47.189)
P: (111.209,113.492,47.754)
O2: (109.226,116.487,41.160)
C4': (110.061,116.838,46.059)
C2': (108.653,117.056,44.172)
O2': (108.478,118.455,44.147)
N1: (110.158,115.446,42.952)
N3: (109.734,114.288,40.922)
N4: (110.264,112.068,40.725)
C6: (110.684,114.309,43.501)
C5: (110.748,113.166,42.801)
O3': (107.668,117.135,46.406)
Image (generated by PyMOL):