ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A442:A443

Extra

PDB:
ATOM 1 O3' A A 441 38.619 135.995 59.689 1.00 24.21 O
ATOM 2 P U A 442 38.809 135.580 61.218 1.00 25.38 P
ATOM 3 OP1 U A 442 37.472 135.184 61.707 1.00 26.44 O
ATOM 4 OP2 U A 442 39.555 136.630 61.929 1.00 25.94 O
ATOM 5 O5' U A 442 39.703 134.271 61.124 1.00 23.50 O
ATOM 6 C5' U A 442 41.078 134.341 60.744 1.00 23.71 C
ATOM 7 C4' U A 442 41.915 133.525 61.699 1.00 24.01 C
ATOM 8 O4' U A 442 41.767 134.068 63.039 1.00 23.80 O
ATOM 9 C3' U A 442 41.556 132.048 61.809 1.00 24.26 C
ATOM 10 O3' U A 442 42.757 131.310 62.022 1.00 24.38 O
ATOM 11 C2' U A 442 40.686 132.010 63.064 1.00 25.35 C
ATOM 12 O2' U A 442 40.651 130.739 63.682 1.00 26.89 O
ATOM 13 C1' U A 442 41.402 133.036 63.932 1.00 25.34 C
ATOM 14 N1 U A 442 40.632 133.629 65.034 1.00 27.86 N
ATOM 15 C2 U A 442 41.079 133.427 66.333 1.00 30.44 C
ATOM 16 O2 U A 442 42.038 132.729 66.611 1.00 33.04 O
ATOM 17 N3 U A 442 40.355 134.075 67.301 1.00 31.27 N
ATOM 18 C4 U A 442 39.252 134.869 67.115 1.00 31.02 C
ATOM 19 O4 U A 442 38.729 135.416 68.086 1.00 33.95 O
ATOM 20 C5 U A 442 38.836 135.000 65.756 1.00 31.71 C
ATOM 21 C6 U A 442 39.523 134.388 64.788 1.00 29.66 C
ATOM 22 P A A 443 43.513 130.652 60.768 1.00 25.94 P
ATOM 23 OP1 A A 443 44.356 129.528 61.231 1.00 23.79 O
ATOM 24 OP2 A A 443 44.126 131.742 59.952 1.00 25.35 O
ATOM 25 O5' A A 443 42.317 130.042 59.916 1.00 24.77 O
TER

ATOM 1 O3' U B 442 42.757 131.310 62.022 1.00 24.38 O
ATOM 2 P A B 443 43.513 130.652 60.768 1.00 25.94 P
ATOM 3 OP1 A B 443 44.356 129.528 61.231 1.00 23.79 O
ATOM 4 OP2 A B 443 44.126 131.742 59.952 1.00 25.35 O
ATOM 5 O5' A B 443 42.317 130.042 59.916 1.00 24.77 O
ATOM 6 C5' A B 443 41.584 128.900 60.368 1.00 23.79 C
ATOM 7 C4' A B 443 40.683 128.391 59.273 1.00 22.01 C
ATOM 8 O4' A B 443 39.648 129.366 58.996 1.00 22.77 O
ATOM 9 C3' A B 443 41.371 128.161 57.946 1.00 21.54 C
ATOM 10 O3' A B 443 41.921 126.855 57.943 1.00 20.01 O
ATOM 11 C2' A B 443 40.214 128.284 56.967 1.00 22.72 C
ATOM 12 O2' A B 443 39.433 127.109 56.968 1.00 24.68 O
ATOM 13 C1' A B 443 39.383 129.399 57.607 1.00 24.16 C
ATOM 14 N9 A B 443 39.686 130.747 57.123 1.00 26.69 N
ATOM 15 C8 A B 443 40.307 131.759 57.812 1.00 28.19 C
ATOM 16 N7 A B 443 40.474 132.852 57.109 1.00 29.34 N
ATOM 17 C5 A B 443 39.931 132.538 55.872 1.00 28.97 C
ATOM 18 C6 A B 443 39.830 133.263 54.679 1.00 28.93 C
ATOM 19 N6 A B 443 40.323 134.491 54.513 1.00 29.74 N
ATOM 20 N1 A B 443 39.209 132.673 53.640 1.00 29.69 N
ATOM 21 C2 A B 443 38.742 131.434 53.794 1.00 30.73 C
ATOM 22 N3 A B 443 38.798 130.638 54.856 1.00 29.49 N
ATOM 23 C4 A B 443 39.416 131.256 55.875 1.00 28.15 C
ATOM 24 P G B 444 43.335 126.581 57.261 1.00 21.90 P
ATOM 25 OP1 G B 444 43.517 125.105 57.260 1.00 20.77 O
ATOM 26 OP2 G B 444 44.335 127.431 57.917 1.00 21.60 O
ATOM 27 O5' G B 444 43.146 127.098 55.770 1.00 20.71 O
TER

Atoms:
C4: (39.252,134.869,67.115)
N3: (40.355,134.075,67.301)
OP1: (37.472,135.184,61.707)
OP2: (39.555,136.630,61.929)
C2: (41.079,133.427,66.333)
C1': (41.402,133.036,63.932)
C3': (41.556,132.048,61.809)
O5': (39.703,134.271,61.124)
O4': (41.767,134.068,63.039)
C5': (41.078,134.341,60.744)
P: (38.809,135.580,61.218)
C4': (41.915,133.525,61.699)
C2': (40.686,132.010,63.064)
O2': (40.651,130.739,63.682)
N1: (40.632,133.629,65.034)
O4: (38.729,135.416,68.086)
O2: (42.038,132.729,66.611)
C6: (39.523,134.388,64.788)
C5: (38.836,135.000,65.756)
O3': (42.757,131.310,62.022)
OP1: (44.356,129.528,61.231)
OP2: (44.126,131.742,59.952)
C3': (41.371,128.161,57.946)
C1': (39.383,129.399,57.607)
C5': (41.584,128.900,60.368)
O4': (39.648,129.366,58.996)
C8: (40.307,131.759,57.812)
O2': (39.433,127.109,56.968)
C6: (39.830,133.263,54.679)
C5: (39.931,132.538,55.872)
C4: (39.416,131.256,55.875)
P: (43.513,130.652,60.768)
C4': (40.683,128.391,59.273)
C2': (40.214,128.284,56.967)
C2: (38.742,131.434,53.794)
N1: (39.209,132.673,53.640)
N3: (38.798,130.638,54.856)
N6: (40.323,134.491,54.513)
N7: (40.474,132.852,57.109)
N9: (39.686,130.747,57.123)
O5': (42.317,130.042,59.916)
O3': (41.921,126.855,57.943)
Image (generated by PyMOL):
PyMOL image
show in jmol