Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01816:01812
Extra
PDB:
ATOM 1 O3' A A1815 115.091 123.766 51.855 1.00 52.15 O
ATOM 2 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A A1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A A1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A A1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A A1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A A1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A A1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A A1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A A1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A A1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A A1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A A1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A A1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A A1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A A1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A A1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A A1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A A1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A A1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
TER
ATOM 1 O3' C B1811 116.899 118.218 65.517 1.00 39.89 O
ATOM 2 P C B1812 118.397 118.163 64.948 1.00 39.74 P
ATOM 3 OP1 C B1812 118.496 116.960 64.086 1.00 40.13 O
ATOM 4 OP2 C B1812 119.321 118.321 66.095 1.00 37.60 O
ATOM 5 O5' C B1812 118.491 119.448 64.011 1.00 39.66 O
ATOM 6 C5' C B1812 117.732 119.513 62.794 1.00 39.04 C
ATOM 7 C4' C B1812 117.634 120.934 62.301 1.00 38.52 C
ATOM 8 O4' C B1812 117.074 121.779 63.338 1.00 38.51 O
ATOM 9 C3' C B1812 118.936 121.634 61.947 1.00 39.28 C
ATOM 10 O3' C B1812 119.374 121.258 60.650 1.00 42.27 O
ATOM 11 C2' C B1812 118.511 123.094 61.980 1.00 37.60 C
ATOM 12 O2' C B1812 117.778 123.462 60.828 1.00 36.67 O
ATOM 13 C1' C B1812 117.577 123.098 63.192 1.00 35.89 C
ATOM 14 N1 C B1812 118.271 123.486 64.430 1.00 32.19 N
ATOM 15 C2 C B1812 118.370 124.847 64.741 1.00 32.42 C
ATOM 16 O2 C B1812 117.882 125.678 63.960 1.00 33.55 O
ATOM 17 N3 C B1812 118.996 125.223 65.877 1.00 31.77 N
ATOM 18 C4 C B1812 119.515 124.299 66.686 1.00 31.82 C
ATOM 19 N4 C B1812 120.107 124.713 67.800 1.00 33.29 N
ATOM 20 C5 C B1812 119.441 122.908 66.390 1.00 31.08 C
ATOM 21 C6 C B1812 118.813 122.549 65.263 1.00 31.19 C
ATOM 22 P G B1813 120.927 121.367 60.261 1.00 40.83 P
ATOM 23 OP1 G B1813 121.065 120.604 58.997 1.00 41.22 O
ATOM 24 OP2 G B1813 121.749 120.992 61.437 1.00 41.24 O
ATOM 25 O5' G B1813 121.153 122.917 59.967 1.00 41.26 O
TER
ATOM 2 P A A1816 114.192 124.105 53.137 1.00 51.42 P
ATOM 3 OP1 A A1816 113.080 123.124 53.160 1.00 52.72 O
ATOM 4 OP2 A A1816 113.886 125.563 53.108 1.00 51.59 O
ATOM 5 O5' A A1816 115.143 123.816 54.386 1.00 48.28 O
ATOM 6 C5' A A1816 115.860 122.577 54.522 1.00 39.94 C
ATOM 7 C4' A A1816 116.409 122.447 55.926 1.00 37.21 C
ATOM 8 O4' A A1816 117.118 123.674 56.264 1.00 35.63 O
ATOM 9 C3' A A1816 115.376 122.321 57.035 1.00 37.85 C
ATOM 10 O3' A A1816 114.908 120.982 57.177 1.00 38.85 O
ATOM 11 C2' A A1816 116.149 122.814 58.253 1.00 36.96 C
ATOM 12 O2' A A1816 117.058 121.866 58.775 1.00 36.90 O
ATOM 13 C1' A A1816 116.950 123.965 57.647 1.00 34.98 C
ATOM 14 N9 A A1816 116.261 125.250 57.780 1.00 32.27 N
ATOM 15 C8 A A1816 115.598 125.968 56.812 1.00 33.06 C
ATOM 16 N7 A A1816 115.062 127.082 57.254 1.00 32.66 N
ATOM 17 C5 A A1816 115.397 127.100 58.601 1.00 31.58 C
ATOM 18 C6 A A1816 115.117 128.013 59.631 1.00 33.82 C
ATOM 19 N6 A A1816 114.414 129.136 59.453 1.00 35.78 N
ATOM 20 N1 A A1816 115.589 127.732 60.867 1.00 35.46 N
ATOM 21 C2 A A1816 116.301 126.608 61.039 1.00 34.36 C
ATOM 22 N3 A A1816 116.632 125.675 60.148 1.00 31.20 N
ATOM 23 C4 A A1816 116.141 125.982 58.936 1.00 31.12 C
ATOM 24 P A A1817 113.414 120.704 57.720 1.00 39.13 P
ATOM 25 OP1 A A1817 113.227 119.231 57.713 1.00 39.43 O
ATOM 26 OP2 A A1817 112.455 121.567 56.977 1.00 38.60 O
ATOM 27 O5' A A1817 113.448 121.181 59.240 1.00 37.20 O
TER
ATOM 1 O3' C B1811 116.899 118.218 65.517 1.00 39.89 O
ATOM 2 P C B1812 118.397 118.163 64.948 1.00 39.74 P
ATOM 3 OP1 C B1812 118.496 116.960 64.086 1.00 40.13 O
ATOM 4 OP2 C B1812 119.321 118.321 66.095 1.00 37.60 O
ATOM 5 O5' C B1812 118.491 119.448 64.011 1.00 39.66 O
ATOM 6 C5' C B1812 117.732 119.513 62.794 1.00 39.04 C
ATOM 7 C4' C B1812 117.634 120.934 62.301 1.00 38.52 C
ATOM 8 O4' C B1812 117.074 121.779 63.338 1.00 38.51 O
ATOM 9 C3' C B1812 118.936 121.634 61.947 1.00 39.28 C
ATOM 10 O3' C B1812 119.374 121.258 60.650 1.00 42.27 O
ATOM 11 C2' C B1812 118.511 123.094 61.980 1.00 37.60 C
ATOM 12 O2' C B1812 117.778 123.462 60.828 1.00 36.67 O
ATOM 13 C1' C B1812 117.577 123.098 63.192 1.00 35.89 C
ATOM 14 N1 C B1812 118.271 123.486 64.430 1.00 32.19 N
ATOM 15 C2 C B1812 118.370 124.847 64.741 1.00 32.42 C
ATOM 16 O2 C B1812 117.882 125.678 63.960 1.00 33.55 O
ATOM 17 N3 C B1812 118.996 125.223 65.877 1.00 31.77 N
ATOM 18 C4 C B1812 119.515 124.299 66.686 1.00 31.82 C
ATOM 19 N4 C B1812 120.107 124.713 67.800 1.00 33.29 N
ATOM 20 C5 C B1812 119.441 122.908 66.390 1.00 31.08 C
ATOM 21 C6 C B1812 118.813 122.549 65.263 1.00 31.19 C
ATOM 22 P G B1813 120.927 121.367 60.261 1.00 40.83 P
ATOM 23 OP1 G B1813 121.065 120.604 58.997 1.00 41.22 O
ATOM 24 OP2 G B1813 121.749 120.992 61.437 1.00 41.24 O
ATOM 25 O5' G B1813 121.153 122.917 59.967 1.00 41.26 O
TER
Atoms:
OP1: (113.080,123.124,53.160)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
OP2: (113.886,125.563,53.108)
C3': (115.376,122.321,57.035)
C1': (116.950,123.965,57.647)
C5': (115.860,122.577,54.522)
O4': (117.118,123.674,56.264)
C8: (115.598,125.968,56.812)
O2': (117.058,121.866,58.775)
C6: (115.117,128.013,59.631)
C5: (115.397,127.100,58.601)
C4: (116.141,125.982,58.936)
P: (114.192,124.105,53.137)
C4': (116.409,122.447,55.926)
C2': (116.149,122.814,58.253)
C2: (116.301,126.608,61.039)
N1: (115.589,127.732,60.867)
N3: (116.632,125.675,60.148)
N6: (114.414,129.136,59.453)
N7: (115.062,127.082,57.254)
N9: (116.261,125.250,57.780)
O5': (115.143,123.816,54.386)
O3': (114.908,120.982,57.177)
C2: (118.370,124.847,64.741)
OP1: (118.496,116.960,64.086)
OP2: (119.321,118.321,66.095)
C4: (119.515,124.299,66.686)
O5': (118.491,119.448,64.011)
C3': (118.936,121.634,61.947)
C1': (117.577,123.098,63.192)
O4': (117.074,121.779,63.338)
C5': (117.732,119.513,62.794)
P: (118.397,118.163,64.948)
O2: (117.882,125.678,63.960)
C4': (117.634,120.934,62.301)
C2': (118.511,123.094,61.980)
O2': (117.778,123.462,60.828)
N1: (118.271,123.486,64.430)
N3: (118.996,125.223,65.877)
N4: (120.107,124.713,67.800)
C6: (118.813,122.549,65.263)
C5: (119.441,122.908,66.390)
O3': (119.374,121.258,60.650)
OP1: (118.496,116.960,64.086)
OP2: (119.321,118.321,66.095)
C4: (119.515,124.299,66.686)
O5': (118.491,119.448,64.011)
C3': (118.936,121.634,61.947)
C1': (117.577,123.098,63.192)
O4': (117.074,121.779,63.338)
C5': (117.732,119.513,62.794)
P: (118.397,118.163,64.948)
O2: (117.882,125.678,63.960)
C4': (117.634,120.934,62.301)
C2': (118.511,123.094,61.980)
O2': (117.778,123.462,60.828)
N1: (118.271,123.486,64.430)
N3: (118.996,125.223,65.877)
N4: (120.107,124.713,67.800)
C6: (118.813,122.549,65.263)
C5: (119.441,122.908,66.390)
O3': (119.374,121.258,60.650)
Image (generated by PyMOL):