Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0306:0307
Extra
PDB:
ATOM 1 O3' A A 305 9.502 142.185 40.567 1.00 49.23 O
ATOM 2 P U A 306 9.804 141.879 39.031 1.00 52.00 P
ATOM 3 OP1 U A 306 10.490 143.069 38.489 1.00 52.69 O
ATOM 4 OP2 U A 306 8.538 141.410 38.413 1.00 54.99 O
ATOM 5 O5' U A 306 10.836 140.666 39.076 1.00 57.10 O
ATOM 6 C5' U A 306 10.406 139.290 38.936 1.00 61.90 C
ATOM 7 C4' U A 306 11.147 138.405 39.918 1.00 64.79 C
ATOM 8 O4' U A 306 12.578 138.647 39.789 1.00 65.84 O
ATOM 9 C3' U A 306 10.840 138.675 41.385 1.00 66.50 C
ATOM 10 O3' U A 306 9.625 138.044 41.851 1.00 66.72 O
ATOM 11 C2' U A 306 12.119 138.284 42.120 1.00 68.52 C
ATOM 12 O2' U A 306 12.198 136.934 42.507 1.00 73.02 O
ATOM 13 C1' U A 306 13.193 138.575 41.066 1.00 68.22 C
ATOM 14 N1 U A 306 14.009 139.779 41.293 1.00 68.02 N
ATOM 15 C2 U A 306 15.347 139.593 41.613 1.00 68.84 C
ATOM 16 O2 U A 306 15.862 138.491 41.712 1.00 68.84 O
ATOM 17 N3 U A 306 16.063 140.746 41.813 1.00 68.84 N
ATOM 18 C4 U A 306 15.595 142.039 41.726 1.00 69.29 C
ATOM 19 O4 U A 306 16.376 142.978 41.902 1.00 69.98 O
ATOM 20 C5 U A 306 14.205 142.150 41.396 1.00 68.16 C
ATOM 21 C6 U A 306 13.479 141.045 41.196 1.00 68.17 C
ATOM 22 P A A 307 9.332 136.462 41.583 1.00 65.42 P
ATOM 23 OP1 A A 307 10.556 135.651 41.385 1.00 64.15 O
ATOM 24 OP2 A A 307 8.275 136.425 40.545 1.00 66.86 O
ATOM 25 O5' A A 307 8.618 135.974 42.920 1.00 63.26 O
TER
ATOM 1 O3' U B 306 9.625 138.044 41.851 1.00 66.72 O
ATOM 2 P A B 307 9.332 136.462 41.583 1.00 65.42 P
ATOM 3 OP1 A B 307 10.556 135.651 41.385 1.00 64.15 O
ATOM 4 OP2 A B 307 8.275 136.425 40.545 1.00 66.86 O
ATOM 5 O5' A B 307 8.618 135.974 42.920 1.00 63.26 O
ATOM 6 C5' A B 307 9.354 135.442 44.035 1.00 59.49 C
ATOM 7 C4' A B 307 8.529 135.572 45.295 1.00 59.12 C
ATOM 8 O4' A B 307 8.400 136.975 45.628 1.00 59.26 O
ATOM 9 C3' A B 307 7.096 135.079 45.172 1.00 60.59 C
ATOM 10 O3' A B 307 7.002 133.675 45.386 1.00 62.71 O
ATOM 11 C2' A B 307 6.365 135.899 46.226 1.00 59.78 C
ATOM 12 O2' A B 307 6.522 135.383 47.531 1.00 61.96 O
ATOM 13 C1' A B 307 7.097 137.240 46.125 1.00 59.44 C
ATOM 14 N9 A B 307 6.469 138.237 45.250 1.00 59.21 N
ATOM 15 C8 A B 307 6.935 138.691 44.040 1.00 57.84 C
ATOM 16 N7 A B 307 6.186 139.616 43.497 1.00 58.14 N
ATOM 17 C5 A B 307 5.147 139.779 44.402 1.00 58.43 C
ATOM 18 C6 A B 307 4.020 140.624 44.406 1.00 58.46 C
ATOM 19 N6 A B 307 3.746 141.500 43.438 1.00 57.32 N
ATOM 20 N1 A B 307 3.176 140.536 45.454 1.00 58.00 N
ATOM 21 C2 A B 307 3.454 139.661 46.428 1.00 59.87 C
ATOM 22 N3 A B 307 4.481 138.819 46.541 1.00 60.19 N
ATOM 23 C4 A B 307 5.302 138.929 45.482 1.00 59.08 C
ATOM 24 P G B 308 5.970 132.805 44.516 1.00 63.02 P
ATOM 25 OP1 G B 308 6.253 131.373 44.789 1.00 63.25 O
ATOM 26 OP2 G B 308 5.991 133.298 43.118 1.00 63.93 O
ATOM 27 O5' G B 308 4.556 133.180 45.140 1.00 63.27 O
TER
ATOM 2 P U A 306 9.804 141.879 39.031 1.00 52.00 P
ATOM 3 OP1 U A 306 10.490 143.069 38.489 1.00 52.69 O
ATOM 4 OP2 U A 306 8.538 141.410 38.413 1.00 54.99 O
ATOM 5 O5' U A 306 10.836 140.666 39.076 1.00 57.10 O
ATOM 6 C5' U A 306 10.406 139.290 38.936 1.00 61.90 C
ATOM 7 C4' U A 306 11.147 138.405 39.918 1.00 64.79 C
ATOM 8 O4' U A 306 12.578 138.647 39.789 1.00 65.84 O
ATOM 9 C3' U A 306 10.840 138.675 41.385 1.00 66.50 C
ATOM 10 O3' U A 306 9.625 138.044 41.851 1.00 66.72 O
ATOM 11 C2' U A 306 12.119 138.284 42.120 1.00 68.52 C
ATOM 12 O2' U A 306 12.198 136.934 42.507 1.00 73.02 O
ATOM 13 C1' U A 306 13.193 138.575 41.066 1.00 68.22 C
ATOM 14 N1 U A 306 14.009 139.779 41.293 1.00 68.02 N
ATOM 15 C2 U A 306 15.347 139.593 41.613 1.00 68.84 C
ATOM 16 O2 U A 306 15.862 138.491 41.712 1.00 68.84 O
ATOM 17 N3 U A 306 16.063 140.746 41.813 1.00 68.84 N
ATOM 18 C4 U A 306 15.595 142.039 41.726 1.00 69.29 C
ATOM 19 O4 U A 306 16.376 142.978 41.902 1.00 69.98 O
ATOM 20 C5 U A 306 14.205 142.150 41.396 1.00 68.16 C
ATOM 21 C6 U A 306 13.479 141.045 41.196 1.00 68.17 C
ATOM 22 P A A 307 9.332 136.462 41.583 1.00 65.42 P
ATOM 23 OP1 A A 307 10.556 135.651 41.385 1.00 64.15 O
ATOM 24 OP2 A A 307 8.275 136.425 40.545 1.00 66.86 O
ATOM 25 O5' A A 307 8.618 135.974 42.920 1.00 63.26 O
TER
ATOM 1 O3' U B 306 9.625 138.044 41.851 1.00 66.72 O
ATOM 2 P A B 307 9.332 136.462 41.583 1.00 65.42 P
ATOM 3 OP1 A B 307 10.556 135.651 41.385 1.00 64.15 O
ATOM 4 OP2 A B 307 8.275 136.425 40.545 1.00 66.86 O
ATOM 5 O5' A B 307 8.618 135.974 42.920 1.00 63.26 O
ATOM 6 C5' A B 307 9.354 135.442 44.035 1.00 59.49 C
ATOM 7 C4' A B 307 8.529 135.572 45.295 1.00 59.12 C
ATOM 8 O4' A B 307 8.400 136.975 45.628 1.00 59.26 O
ATOM 9 C3' A B 307 7.096 135.079 45.172 1.00 60.59 C
ATOM 10 O3' A B 307 7.002 133.675 45.386 1.00 62.71 O
ATOM 11 C2' A B 307 6.365 135.899 46.226 1.00 59.78 C
ATOM 12 O2' A B 307 6.522 135.383 47.531 1.00 61.96 O
ATOM 13 C1' A B 307 7.097 137.240 46.125 1.00 59.44 C
ATOM 14 N9 A B 307 6.469 138.237 45.250 1.00 59.21 N
ATOM 15 C8 A B 307 6.935 138.691 44.040 1.00 57.84 C
ATOM 16 N7 A B 307 6.186 139.616 43.497 1.00 58.14 N
ATOM 17 C5 A B 307 5.147 139.779 44.402 1.00 58.43 C
ATOM 18 C6 A B 307 4.020 140.624 44.406 1.00 58.46 C
ATOM 19 N6 A B 307 3.746 141.500 43.438 1.00 57.32 N
ATOM 20 N1 A B 307 3.176 140.536 45.454 1.00 58.00 N
ATOM 21 C2 A B 307 3.454 139.661 46.428 1.00 59.87 C
ATOM 22 N3 A B 307 4.481 138.819 46.541 1.00 60.19 N
ATOM 23 C4 A B 307 5.302 138.929 45.482 1.00 59.08 C
ATOM 24 P G B 308 5.970 132.805 44.516 1.00 63.02 P
ATOM 25 OP1 G B 308 6.253 131.373 44.789 1.00 63.25 O
ATOM 26 OP2 G B 308 5.991 133.298 43.118 1.00 63.93 O
ATOM 27 O5' G B 308 4.556 133.180 45.140 1.00 63.27 O
TER
Atoms:
C4: (15.595,142.039,41.726)
N3: (16.063,140.746,41.813)
OP1: (10.490,143.069,38.489)
OP2: (8.538,141.410,38.413)
C2: (15.347,139.593,41.613)
C1': (13.193,138.575,41.066)
C3': (10.840,138.675,41.385)
O5': (10.836,140.666,39.076)
O4': (12.578,138.647,39.789)
C5': (10.406,139.290,38.936)
P: (9.804,141.879,39.031)
C4': (11.147,138.405,39.918)
C2': (12.119,138.284,42.120)
O2': (12.198,136.934,42.507)
N1: (14.009,139.779,41.293)
O4: (16.376,142.978,41.902)
O2: (15.862,138.491,41.712)
C6: (13.479,141.045,41.196)
C5: (14.205,142.150,41.396)
O3': (9.625,138.044,41.851)
N3: (16.063,140.746,41.813)
OP1: (10.490,143.069,38.489)
OP2: (8.538,141.410,38.413)
C2: (15.347,139.593,41.613)
C1': (13.193,138.575,41.066)
C3': (10.840,138.675,41.385)
O5': (10.836,140.666,39.076)
O4': (12.578,138.647,39.789)
C5': (10.406,139.290,38.936)
P: (9.804,141.879,39.031)
C4': (11.147,138.405,39.918)
C2': (12.119,138.284,42.120)
O2': (12.198,136.934,42.507)
N1: (14.009,139.779,41.293)
O4: (16.376,142.978,41.902)
O2: (15.862,138.491,41.712)
C6: (13.479,141.045,41.196)
C5: (14.205,142.150,41.396)
O3': (9.625,138.044,41.851)
OP1: (10.556,135.651,41.385)
OP2: (8.275,136.425,40.545)
C3': (7.096,135.079,45.172)
C1': (7.097,137.240,46.125)
C5': (9.354,135.442,44.035)
O4': (8.400,136.975,45.628)
C8: (6.935,138.691,44.040)
O2': (6.522,135.383,47.531)
C6: (4.020,140.624,44.406)
C5: (5.147,139.779,44.402)
C4: (5.302,138.929,45.482)
P: (9.332,136.462,41.583)
C4': (8.529,135.572,45.295)
C2': (6.365,135.899,46.226)
C2: (3.454,139.661,46.428)
N1: (3.176,140.536,45.454)
N3: (4.481,138.819,46.541)
N6: (3.746,141.500,43.438)
N7: (6.186,139.616,43.497)
N9: (6.469,138.237,45.250)
O5': (8.618,135.974,42.920)
O3': (7.002,133.675,45.386)
OP2: (8.275,136.425,40.545)
C3': (7.096,135.079,45.172)
C1': (7.097,137.240,46.125)
C5': (9.354,135.442,44.035)
O4': (8.400,136.975,45.628)
C8: (6.935,138.691,44.040)
O2': (6.522,135.383,47.531)
C6: (4.020,140.624,44.406)
C5: (5.147,139.779,44.402)
C4: (5.302,138.929,45.482)
P: (9.332,136.462,41.583)
C4': (8.529,135.572,45.295)
C2': (6.365,135.899,46.226)
C2: (3.454,139.661,46.428)
N1: (3.176,140.536,45.454)
N3: (4.481,138.819,46.541)
N6: (3.746,141.500,43.438)
N7: (6.186,139.616,43.497)
N9: (6.469,138.237,45.250)
O5': (8.618,135.974,42.920)
O3': (7.002,133.675,45.386)
Image (generated by PyMOL):