ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A551:A582

Extra

PDB:
ATOM 1 O3' A A 550 -15.576 100.220 96.269 1.00 49.10 O
ATOM 2 P C A 551 -14.707 99.135 97.050 1.00 48.62 P
ATOM 3 OP1 C A 551 -15.330 97.797 96.859 1.00 48.73 O
ATOM 4 OP2 C A 551 -14.488 99.667 98.422 1.00 46.97 O
ATOM 5 O5' C A 551 -13.347 99.113 96.231 1.00 49.24 O
ATOM 6 C5' C A 551 -13.330 98.628 94.880 1.00 48.49 C
ATOM 7 C4' C A 551 -11.975 98.842 94.265 1.00 48.55 C
ATOM 8 O4' C A 551 -11.658 100.254 94.267 1.00 47.97 O
ATOM 9 C3' C A 551 -10.813 98.206 94.997 1.00 48.04 C
ATOM 10 O3' C A 551 -10.689 96.844 94.636 1.00 50.06 O
ATOM 11 C2' C A 551 -9.636 99.033 94.507 1.00 47.67 C
ATOM 12 O2' C A 551 -9.176 98.662 93.228 1.00 49.02 O
ATOM 13 C1' C A 551 -10.262 100.421 94.408 1.00 47.99 C
ATOM 14 N1 C A 551 -9.998 101.278 95.569 1.00 48.99 N
ATOM 15 C2 C A 551 -8.813 102.014 95.596 1.00 50.09 C
ATOM 16 O2 C A 551 -8.003 101.879 94.667 1.00 51.43 O
ATOM 17 N3 C A 551 -8.570 102.846 96.634 1.00 50.00 N
ATOM 18 C4 C A 551 -9.448 102.941 97.626 1.00 49.58 C
ATOM 19 N4 C A 551 -9.176 103.784 98.620 1.00 48.74 N
ATOM 20 C5 C A 551 -10.648 102.181 97.641 1.00 49.87 C
ATOM 21 C6 C A 551 -10.885 101.371 96.601 1.00 49.16 C
ATOM 22 P G A 552 -10.366 95.751 95.759 1.00 52.74 P
ATOM 23 OP1 G A 552 -10.231 94.436 95.085 1.00 52.75 O
ATOM 24 OP2 G A 552 -11.313 95.903 96.882 1.00 52.21 O
ATOM 25 O5' G A 552 -8.933 96.174 96.297 1.00 52.80 O
TER

ATOM 1 O3' A B 581 0.634 107.794 98.007 1.00 46.27 O
ATOM 2 P C B 582 -0.419 108.670 97.194 1.00 42.99 P
ATOM 3 OP1 C B 582 0.217 109.977 96.933 1.00 43.09 O
ATOM 4 OP2 C B 582 -1.703 108.615 97.909 1.00 44.25 O
ATOM 5 O5' C B 582 -0.546 107.901 95.810 1.00 42.16 O
ATOM 6 C5' C B 582 0.540 107.925 94.881 1.00 40.87 C
ATOM 7 C4' C B 582 0.244 107.045 93.696 1.00 42.12 C
ATOM 8 O4' C B 582 -0.092 105.719 94.177 1.00 43.52 O
ATOM 9 C3' C B 582 -0.954 107.428 92.851 1.00 40.81 C
ATOM 10 O3' C B 582 -0.649 108.503 91.963 1.00 39.17 O
ATOM 11 C2' C B 582 -1.275 106.104 92.162 1.00 41.55 C
ATOM 12 O2' C B 582 -0.394 105.768 91.104 1.00 39.68 O
ATOM 13 C1' C B 582 -1.040 105.123 93.310 1.00 43.24 C
ATOM 14 N1 C B 582 -2.266 104.832 94.074 1.00 45.62 N
ATOM 15 C2 C B 582 -3.146 103.858 93.577 1.00 47.71 C
ATOM 16 O2 C B 582 -2.851 103.248 92.531 1.00 48.97 O
ATOM 17 N3 C B 582 -4.295 103.600 94.245 1.00 48.71 N
ATOM 18 C4 C B 582 -4.578 104.265 95.362 1.00 47.52 C
ATOM 19 N4 C B 582 -5.727 103.988 95.977 1.00 48.37 N
ATOM 20 C5 C B 582 -3.696 105.247 95.899 1.00 47.51 C
ATOM 21 C6 C B 582 -2.560 105.494 95.234 1.00 46.25 C
ATOM 22 P U B 583 -1.794 109.552 91.567 1.00 40.23 P
ATOM 23 OP1 U B 583 -1.260 110.391 90.495 1.00 40.18 O
ATOM 24 OP2 U B 583 -2.332 110.195 92.778 1.00 39.99 O
ATOM 25 O5' U B 583 -2.931 108.627 90.957 1.00 42.23 O
TER

Atoms:
C2: (-8.813,102.014,95.596)
OP1: (-15.330,97.797,96.859)
OP2: (-14.488,99.667,98.422)
C4: (-9.448,102.941,97.626)
O5': (-13.347,99.113,96.231)
C3': (-10.813,98.206,94.997)
C1': (-10.262,100.421,94.408)
O4': (-11.658,100.254,94.267)
C5': (-13.330,98.628,94.880)
P: (-14.707,99.135,97.050)
O2: (-8.003,101.879,94.667)
C4': (-11.975,98.842,94.265)
C2': (-9.636,99.033,94.507)
O2': (-9.176,98.662,93.228)
N1: (-9.998,101.278,95.569)
N3: (-8.570,102.846,96.634)
N4: (-9.176,103.784,98.620)
C6: (-10.885,101.371,96.601)
C5: (-10.648,102.181,97.641)
O3': (-10.689,96.844,94.636)
C2: (-3.146,103.858,93.577)
OP1: (0.217,109.977,96.933)
OP2: (-1.703,108.615,97.909)
C4: (-4.578,104.265,95.362)
O5': (-0.546,107.901,95.810)
C3': (-0.954,107.428,92.851)
C1': (-1.040,105.123,93.310)
O4': (-0.092,105.719,94.177)
C5': (0.540,107.925,94.881)
P: (-0.419,108.670,97.194)
O2: (-2.851,103.248,92.531)
C4': (0.244,107.045,93.696)
C2': (-1.275,106.104,92.162)
O2': (-0.394,105.768,91.104)
N1: (-2.266,104.832,94.074)
N3: (-4.295,103.600,94.245)
N4: (-5.727,103.988,95.977)
C6: (-2.560,105.494,95.234)
C5: (-3.696,105.247,95.899)
O3': (-0.649,108.503,91.963)
Image (generated by PyMOL):
PyMOL image
show in jmol