Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0251:0252
Extra
PDB:
ATOM 1 O3' A A 250 100.334 119.553 2.250 1.00 62.80 O
ATOM 2 P U A 251 101.504 119.457 3.345 1.00 64.10 P
ATOM 3 OP1 U A 251 102.225 120.750 3.451 1.00 60.83 O
ATOM 4 OP2 U A 251 102.266 118.215 3.072 1.00 63.53 O
ATOM 5 O5' U A 251 100.712 119.256 4.708 1.00 66.42 O
ATOM 6 C5' U A 251 100.003 118.033 4.999 1.00 65.28 C
ATOM 7 C4' U A 251 99.228 118.190 6.287 1.00 64.99 C
ATOM 8 O4' U A 251 100.163 118.510 7.357 1.00 64.38 O
ATOM 9 C3' U A 251 98.213 119.327 6.274 1.00 64.56 C
ATOM 10 O3' U A 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 11 C2' U A 251 99.037 120.498 6.804 1.00 65.57 C
ATOM 12 O2' U A 251 98.257 121.538 7.355 1.00 66.41 O
ATOM 13 C1' U A 251 99.889 119.801 7.865 1.00 65.64 C
ATOM 14 N1 U A 251 101.171 120.439 8.214 1.00 66.72 N
ATOM 15 C2 U A 251 101.371 120.808 9.540 1.00 68.09 C
ATOM 16 O2 U A 251 100.521 120.686 10.403 1.00 69.68 O
ATOM 17 N3 U A 251 102.608 121.327 9.821 1.00 69.09 N
ATOM 18 C4 U A 251 103.643 121.526 8.942 1.00 69.87 C
ATOM 19 O4 U A 251 104.729 121.926 9.372 1.00 70.85 O
ATOM 20 C5 U A 251 103.353 121.158 7.586 1.00 69.26 C
ATOM 21 C6 U A 251 102.156 120.643 7.276 1.00 67.76 C
ATOM 22 P G A 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 23 OP1 G A 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 24 OP2 G A 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 25 O5' G A 252 95.640 118.918 5.135 1.00 65.25 O
TER
ATOM 1 O3' U B 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 2 P G B 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 3 OP1 G B 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 4 OP2 G B 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 5 O5' G B 252 95.640 118.918 5.135 1.00 65.25 O
ATOM 6 C5' G B 252 95.141 120.247 4.987 1.00 65.68 C
ATOM 7 C4' G B 252 94.103 120.273 3.904 1.00 65.52 C
ATOM 8 O4' G B 252 94.737 119.957 2.637 1.00 66.65 O
ATOM 9 C3' G B 252 92.982 119.262 4.082 1.00 65.31 C
ATOM 10 O3' G B 252 91.766 119.775 3.574 1.00 64.15 O
ATOM 11 C2' G B 252 93.478 118.047 3.303 1.00 67.06 C
ATOM 12 O2' G B 252 92.431 117.247 2.779 1.00 67.72 O
ATOM 13 C1' G B 252 94.310 118.682 2.184 1.00 67.47 C
ATOM 14 N9 G B 252 95.502 117.888 1.875 1.00 67.42 N
ATOM 15 C8 G B 252 96.317 117.246 2.777 1.00 67.40 C
ATOM 16 N7 G B 252 97.285 116.579 2.212 1.00 67.61 N
ATOM 17 C5 G B 252 97.107 116.793 0.854 1.00 67.28 C
ATOM 18 C6 G B 252 97.847 116.304 -0.257 1.00 67.46 C
ATOM 19 O6 G B 252 98.820 115.531 -0.262 1.00 66.70 O
ATOM 20 N1 G B 252 97.343 116.792 -1.458 1.00 66.79 N
ATOM 21 C2 G B 252 96.262 117.629 -1.580 1.00 65.58 C
ATOM 22 N2 G B 252 95.952 118.007 -2.827 1.00 64.95 N
ATOM 23 N3 G B 252 95.546 118.068 -0.557 1.00 66.22 N
ATOM 24 C4 G B 252 96.023 117.615 0.625 1.00 67.28 C
ATOM 25 P U B 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 26 OP1 U B 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 27 OP2 U B 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 28 O5' U B 253 89.454 120.739 3.767 1.00 62.00 O
TER
ATOM 2 P U A 251 101.504 119.457 3.345 1.00 64.10 P
ATOM 3 OP1 U A 251 102.225 120.750 3.451 1.00 60.83 O
ATOM 4 OP2 U A 251 102.266 118.215 3.072 1.00 63.53 O
ATOM 5 O5' U A 251 100.712 119.256 4.708 1.00 66.42 O
ATOM 6 C5' U A 251 100.003 118.033 4.999 1.00 65.28 C
ATOM 7 C4' U A 251 99.228 118.190 6.287 1.00 64.99 C
ATOM 8 O4' U A 251 100.163 118.510 7.357 1.00 64.38 O
ATOM 9 C3' U A 251 98.213 119.327 6.274 1.00 64.56 C
ATOM 10 O3' U A 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 11 C2' U A 251 99.037 120.498 6.804 1.00 65.57 C
ATOM 12 O2' U A 251 98.257 121.538 7.355 1.00 66.41 O
ATOM 13 C1' U A 251 99.889 119.801 7.865 1.00 65.64 C
ATOM 14 N1 U A 251 101.171 120.439 8.214 1.00 66.72 N
ATOM 15 C2 U A 251 101.371 120.808 9.540 1.00 68.09 C
ATOM 16 O2 U A 251 100.521 120.686 10.403 1.00 69.68 O
ATOM 17 N3 U A 251 102.608 121.327 9.821 1.00 69.09 N
ATOM 18 C4 U A 251 103.643 121.526 8.942 1.00 69.87 C
ATOM 19 O4 U A 251 104.729 121.926 9.372 1.00 70.85 O
ATOM 20 C5 U A 251 103.353 121.158 7.586 1.00 69.26 C
ATOM 21 C6 U A 251 102.156 120.643 7.276 1.00 67.76 C
ATOM 22 P G A 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 23 OP1 G A 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 24 OP2 G A 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 25 O5' G A 252 95.640 118.918 5.135 1.00 65.25 O
TER
ATOM 1 O3' U B 251 97.136 119.003 7.153 1.00 64.35 O
ATOM 2 P G B 252 95.820 118.276 6.574 1.00 65.31 P
ATOM 3 OP1 G B 252 94.652 118.692 7.396 1.00 64.88 O
ATOM 4 OP2 G B 252 96.102 116.833 6.379 1.00 64.83 O
ATOM 5 O5' G B 252 95.640 118.918 5.135 1.00 65.25 O
ATOM 6 C5' G B 252 95.141 120.247 4.987 1.00 65.68 C
ATOM 7 C4' G B 252 94.103 120.273 3.904 1.00 65.52 C
ATOM 8 O4' G B 252 94.737 119.957 2.637 1.00 66.65 O
ATOM 9 C3' G B 252 92.982 119.262 4.082 1.00 65.31 C
ATOM 10 O3' G B 252 91.766 119.775 3.574 1.00 64.15 O
ATOM 11 C2' G B 252 93.478 118.047 3.303 1.00 67.06 C
ATOM 12 O2' G B 252 92.431 117.247 2.779 1.00 67.72 O
ATOM 13 C1' G B 252 94.310 118.682 2.184 1.00 67.47 C
ATOM 14 N9 G B 252 95.502 117.888 1.875 1.00 67.42 N
ATOM 15 C8 G B 252 96.317 117.246 2.777 1.00 67.40 C
ATOM 16 N7 G B 252 97.285 116.579 2.212 1.00 67.61 N
ATOM 17 C5 G B 252 97.107 116.793 0.854 1.00 67.28 C
ATOM 18 C6 G B 252 97.847 116.304 -0.257 1.00 67.46 C
ATOM 19 O6 G B 252 98.820 115.531 -0.262 1.00 66.70 O
ATOM 20 N1 G B 252 97.343 116.792 -1.458 1.00 66.79 N
ATOM 21 C2 G B 252 96.262 117.629 -1.580 1.00 65.58 C
ATOM 22 N2 G B 252 95.952 118.007 -2.827 1.00 64.95 N
ATOM 23 N3 G B 252 95.546 118.068 -0.557 1.00 66.22 N
ATOM 24 C4 G B 252 96.023 117.615 0.625 1.00 67.28 C
ATOM 25 P U B 253 90.472 119.779 4.515 1.00 61.71 P
ATOM 26 OP1 U B 253 90.883 120.410 5.789 1.00 62.79 O
ATOM 27 OP2 U B 253 89.887 118.419 4.526 1.00 63.01 O
ATOM 28 O5' U B 253 89.454 120.739 3.767 1.00 62.00 O
TER
Atoms:
C4: (103.643,121.526,8.942)
N3: (102.608,121.327,9.821)
OP1: (102.225,120.750,3.451)
OP2: (102.266,118.215,3.072)
C2: (101.371,120.808,9.540)
C1': (99.889,119.801,7.865)
C3': (98.213,119.327,6.274)
O5': (100.712,119.256,4.708)
O4': (100.163,118.510,7.357)
C5': (100.003,118.033,4.999)
P: (101.504,119.457,3.345)
C4': (99.228,118.190,6.287)
C2': (99.037,120.498,6.804)
O2': (98.257,121.538,7.355)
N1: (101.171,120.439,8.214)
O4: (104.729,121.926,9.372)
O2: (100.521,120.686,10.403)
C6: (102.156,120.643,7.276)
C5: (103.353,121.158,7.586)
O3': (97.136,119.003,7.153)
N3: (102.608,121.327,9.821)
OP1: (102.225,120.750,3.451)
OP2: (102.266,118.215,3.072)
C2: (101.371,120.808,9.540)
C1': (99.889,119.801,7.865)
C3': (98.213,119.327,6.274)
O5': (100.712,119.256,4.708)
O4': (100.163,118.510,7.357)
C5': (100.003,118.033,4.999)
P: (101.504,119.457,3.345)
C4': (99.228,118.190,6.287)
C2': (99.037,120.498,6.804)
O2': (98.257,121.538,7.355)
N1: (101.171,120.439,8.214)
O4: (104.729,121.926,9.372)
O2: (100.521,120.686,10.403)
C6: (102.156,120.643,7.276)
C5: (103.353,121.158,7.586)
O3': (97.136,119.003,7.153)
OP1: (94.652,118.692,7.396)
OP2: (96.102,116.833,6.379)
C3': (92.982,119.262,4.082)
C1': (94.310,118.682,2.184)
C5': (95.141,120.247,4.987)
O6: (98.820,115.531,-0.262)
O4': (94.737,119.957,2.637)
C8: (96.317,117.246,2.777)
C2: (96.262,117.629,-1.580)
C6: (97.847,116.304,-0.257)
C5: (97.107,116.793,0.854)
C4: (96.023,117.615,0.625)
P: (95.820,118.276,6.574)
C4': (94.103,120.273,3.904)
C2': (93.478,118.047,3.303)
O2': (92.431,117.247,2.779)
N1: (97.343,116.792,-1.458)
N2: (95.952,118.007,-2.827)
N3: (95.546,118.068,-0.557)
N7: (97.285,116.579,2.212)
N9: (95.502,117.888,1.875)
O5': (95.640,118.918,5.135)
O3': (91.766,119.775,3.574)
OP2: (96.102,116.833,6.379)
C3': (92.982,119.262,4.082)
C1': (94.310,118.682,2.184)
C5': (95.141,120.247,4.987)
O6: (98.820,115.531,-0.262)
O4': (94.737,119.957,2.637)
C8: (96.317,117.246,2.777)
C2: (96.262,117.629,-1.580)
C6: (97.847,116.304,-0.257)
C5: (97.107,116.793,0.854)
C4: (96.023,117.615,0.625)
P: (95.820,118.276,6.574)
C4': (94.103,120.273,3.904)
C2': (93.478,118.047,3.303)
O2': (92.431,117.247,2.779)
N1: (97.343,116.792,-1.458)
N2: (95.952,118.007,-2.827)
N3: (95.546,118.068,-0.557)
N7: (97.285,116.579,2.212)
N9: (95.502,117.888,1.875)
O5': (95.640,118.918,5.135)
O3': (91.766,119.775,3.574)
Image (generated by PyMOL):