Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0306:0307
Extra
PDB:
ATOM 1 O3' A A 305 9.009 141.857 40.667 1.00 47.39 O
ATOM 2 P U A 306 9.350 141.565 39.134 1.00 50.68 P
ATOM 3 OP1 U A 306 10.120 142.708 38.603 1.00 49.78 O
ATOM 4 OP2 U A 306 8.086 141.149 38.458 1.00 50.58 O
ATOM 5 O5' U A 306 10.338 140.320 39.250 1.00 49.55 O
ATOM 6 C5' U A 306 10.036 139.050 38.648 1.00 52.46 C
ATOM 7 C4' U A 306 10.668 137.927 39.449 1.00 54.37 C
ATOM 8 O4' U A 306 12.106 138.161 39.558 1.00 54.48 O
ATOM 9 C3' U A 306 10.159 137.766 40.882 1.00 54.61 C
ATOM 10 O3' U A 306 10.203 136.387 41.249 1.00 55.20 O
ATOM 11 C2' U A 306 11.190 138.550 41.683 1.00 54.88 C
ATOM 12 O2' U A 306 11.285 138.169 43.039 1.00 57.50 O
ATOM 13 C1' U A 306 12.473 138.214 40.924 1.00 53.93 C
ATOM 14 N1 U A 306 13.546 139.207 41.098 1.00 52.78 N
ATOM 15 C2 U A 306 14.812 138.736 41.403 1.00 52.96 C
ATOM 16 O2 U A 306 15.079 137.546 41.477 1.00 53.56 O
ATOM 17 N3 U A 306 15.758 139.711 41.615 1.00 53.03 N
ATOM 18 C4 U A 306 15.577 141.078 41.540 1.00 53.18 C
ATOM 19 O4 U A 306 16.522 141.831 41.787 1.00 53.32 O
ATOM 20 C5 U A 306 14.251 141.483 41.190 1.00 52.34 C
ATOM 21 C6 U A 306 13.306 140.560 40.985 1.00 52.16 C
ATOM 22 P A A 307 8.836 135.587 41.538 1.00 55.65 P
ATOM 23 OP1 A A 307 9.149 134.140 41.399 1.00 54.28 O
ATOM 24 OP2 A A 307 7.742 136.180 40.719 1.00 55.40 O
ATOM 25 O5' A A 307 8.517 135.894 43.068 1.00 52.23 O
TER
ATOM 1 O3' U B 306 10.203 136.387 41.249 1.00 55.20 O
ATOM 2 P A B 307 8.836 135.587 41.538 1.00 55.65 P
ATOM 3 OP1 A B 307 9.149 134.140 41.399 1.00 54.28 O
ATOM 4 OP2 A B 307 7.742 136.180 40.719 1.00 55.40 O
ATOM 5 O5' A B 307 8.517 135.894 43.068 1.00 52.23 O
ATOM 6 C5' A B 307 9.144 135.143 44.126 1.00 49.58 C
ATOM 7 C4' A B 307 8.275 135.166 45.357 1.00 48.17 C
ATOM 8 O4' A B 307 8.115 136.535 45.811 1.00 48.84 O
ATOM 9 C3' A B 307 6.859 134.667 45.134 1.00 49.07 C
ATOM 10 O3' A B 307 6.809 133.252 45.256 1.00 50.10 O
ATOM 11 C2' A B 307 6.086 135.388 46.227 1.00 48.16 C
ATOM 12 O2' A B 307 6.296 134.780 47.487 1.00 48.75 O
ATOM 13 C1' A B 307 6.774 136.756 46.221 1.00 47.22 C
ATOM 14 N9 A B 307 6.188 137.748 45.311 1.00 45.75 N
ATOM 15 C8 A B 307 6.740 138.209 44.140 1.00 45.72 C
ATOM 16 N7 A B 307 6.020 139.122 43.537 1.00 45.52 N
ATOM 17 C5 A B 307 4.913 139.269 44.357 1.00 43.53 C
ATOM 18 C6 A B 307 3.777 140.098 44.270 1.00 43.66 C
ATOM 19 N6 A B 307 3.569 140.977 43.284 1.00 39.96 N
ATOM 20 N1 A B 307 2.852 139.994 45.248 1.00 43.04 N
ATOM 21 C2 A B 307 3.068 139.124 46.244 1.00 44.19 C
ATOM 22 N3 A B 307 4.098 138.301 46.440 1.00 45.01 N
ATOM 23 C4 A B 307 4.997 138.422 45.450 1.00 44.54 C
ATOM 24 P G B 308 5.762 132.411 44.379 1.00 49.95 P
ATOM 25 OP1 G B 308 6.024 130.974 44.648 1.00 48.97 O
ATOM 26 OP2 G B 308 5.786 132.906 42.978 1.00 49.70 O
ATOM 27 O5' G B 308 4.363 132.805 45.022 1.00 49.37 O
TER
ATOM 2 P U A 306 9.350 141.565 39.134 1.00 50.68 P
ATOM 3 OP1 U A 306 10.120 142.708 38.603 1.00 49.78 O
ATOM 4 OP2 U A 306 8.086 141.149 38.458 1.00 50.58 O
ATOM 5 O5' U A 306 10.338 140.320 39.250 1.00 49.55 O
ATOM 6 C5' U A 306 10.036 139.050 38.648 1.00 52.46 C
ATOM 7 C4' U A 306 10.668 137.927 39.449 1.00 54.37 C
ATOM 8 O4' U A 306 12.106 138.161 39.558 1.00 54.48 O
ATOM 9 C3' U A 306 10.159 137.766 40.882 1.00 54.61 C
ATOM 10 O3' U A 306 10.203 136.387 41.249 1.00 55.20 O
ATOM 11 C2' U A 306 11.190 138.550 41.683 1.00 54.88 C
ATOM 12 O2' U A 306 11.285 138.169 43.039 1.00 57.50 O
ATOM 13 C1' U A 306 12.473 138.214 40.924 1.00 53.93 C
ATOM 14 N1 U A 306 13.546 139.207 41.098 1.00 52.78 N
ATOM 15 C2 U A 306 14.812 138.736 41.403 1.00 52.96 C
ATOM 16 O2 U A 306 15.079 137.546 41.477 1.00 53.56 O
ATOM 17 N3 U A 306 15.758 139.711 41.615 1.00 53.03 N
ATOM 18 C4 U A 306 15.577 141.078 41.540 1.00 53.18 C
ATOM 19 O4 U A 306 16.522 141.831 41.787 1.00 53.32 O
ATOM 20 C5 U A 306 14.251 141.483 41.190 1.00 52.34 C
ATOM 21 C6 U A 306 13.306 140.560 40.985 1.00 52.16 C
ATOM 22 P A A 307 8.836 135.587 41.538 1.00 55.65 P
ATOM 23 OP1 A A 307 9.149 134.140 41.399 1.00 54.28 O
ATOM 24 OP2 A A 307 7.742 136.180 40.719 1.00 55.40 O
ATOM 25 O5' A A 307 8.517 135.894 43.068 1.00 52.23 O
TER
ATOM 1 O3' U B 306 10.203 136.387 41.249 1.00 55.20 O
ATOM 2 P A B 307 8.836 135.587 41.538 1.00 55.65 P
ATOM 3 OP1 A B 307 9.149 134.140 41.399 1.00 54.28 O
ATOM 4 OP2 A B 307 7.742 136.180 40.719 1.00 55.40 O
ATOM 5 O5' A B 307 8.517 135.894 43.068 1.00 52.23 O
ATOM 6 C5' A B 307 9.144 135.143 44.126 1.00 49.58 C
ATOM 7 C4' A B 307 8.275 135.166 45.357 1.00 48.17 C
ATOM 8 O4' A B 307 8.115 136.535 45.811 1.00 48.84 O
ATOM 9 C3' A B 307 6.859 134.667 45.134 1.00 49.07 C
ATOM 10 O3' A B 307 6.809 133.252 45.256 1.00 50.10 O
ATOM 11 C2' A B 307 6.086 135.388 46.227 1.00 48.16 C
ATOM 12 O2' A B 307 6.296 134.780 47.487 1.00 48.75 O
ATOM 13 C1' A B 307 6.774 136.756 46.221 1.00 47.22 C
ATOM 14 N9 A B 307 6.188 137.748 45.311 1.00 45.75 N
ATOM 15 C8 A B 307 6.740 138.209 44.140 1.00 45.72 C
ATOM 16 N7 A B 307 6.020 139.122 43.537 1.00 45.52 N
ATOM 17 C5 A B 307 4.913 139.269 44.357 1.00 43.53 C
ATOM 18 C6 A B 307 3.777 140.098 44.270 1.00 43.66 C
ATOM 19 N6 A B 307 3.569 140.977 43.284 1.00 39.96 N
ATOM 20 N1 A B 307 2.852 139.994 45.248 1.00 43.04 N
ATOM 21 C2 A B 307 3.068 139.124 46.244 1.00 44.19 C
ATOM 22 N3 A B 307 4.098 138.301 46.440 1.00 45.01 N
ATOM 23 C4 A B 307 4.997 138.422 45.450 1.00 44.54 C
ATOM 24 P G B 308 5.762 132.411 44.379 1.00 49.95 P
ATOM 25 OP1 G B 308 6.024 130.974 44.648 1.00 48.97 O
ATOM 26 OP2 G B 308 5.786 132.906 42.978 1.00 49.70 O
ATOM 27 O5' G B 308 4.363 132.805 45.022 1.00 49.37 O
TER
Atoms:
C4: (15.577,141.078,41.540)
N3: (15.758,139.711,41.615)
OP1: (10.120,142.708,38.603)
OP2: (8.086,141.149,38.458)
C2: (14.812,138.736,41.403)
C1': (12.473,138.214,40.924)
C3': (10.159,137.766,40.882)
O5': (10.338,140.320,39.250)
O4': (12.106,138.161,39.558)
C5': (10.036,139.050,38.648)
P: (9.350,141.565,39.134)
C4': (10.668,137.927,39.449)
C2': (11.190,138.550,41.683)
O2': (11.285,138.169,43.039)
N1: (13.546,139.207,41.098)
O4: (16.522,141.831,41.787)
O2: (15.079,137.546,41.477)
C6: (13.306,140.560,40.985)
C5: (14.251,141.483,41.190)
O3': (10.203,136.387,41.249)
N3: (15.758,139.711,41.615)
OP1: (10.120,142.708,38.603)
OP2: (8.086,141.149,38.458)
C2: (14.812,138.736,41.403)
C1': (12.473,138.214,40.924)
C3': (10.159,137.766,40.882)
O5': (10.338,140.320,39.250)
O4': (12.106,138.161,39.558)
C5': (10.036,139.050,38.648)
P: (9.350,141.565,39.134)
C4': (10.668,137.927,39.449)
C2': (11.190,138.550,41.683)
O2': (11.285,138.169,43.039)
N1: (13.546,139.207,41.098)
O4: (16.522,141.831,41.787)
O2: (15.079,137.546,41.477)
C6: (13.306,140.560,40.985)
C5: (14.251,141.483,41.190)
O3': (10.203,136.387,41.249)
OP1: (9.149,134.140,41.399)
OP2: (7.742,136.180,40.719)
C3': (6.859,134.667,45.134)
C1': (6.774,136.756,46.221)
C5': (9.144,135.143,44.126)
O4': (8.115,136.535,45.811)
C8: (6.740,138.209,44.140)
O2': (6.296,134.780,47.487)
C6: (3.777,140.098,44.270)
C5: (4.913,139.269,44.357)
C4: (4.997,138.422,45.450)
P: (8.836,135.587,41.538)
C4': (8.275,135.166,45.357)
C2': (6.086,135.388,46.227)
C2: (3.068,139.124,46.244)
N1: (2.852,139.994,45.248)
N3: (4.098,138.301,46.440)
N6: (3.569,140.977,43.284)
N7: (6.020,139.122,43.537)
N9: (6.188,137.748,45.311)
O5': (8.517,135.894,43.068)
O3': (6.809,133.252,45.256)
OP2: (7.742,136.180,40.719)
C3': (6.859,134.667,45.134)
C1': (6.774,136.756,46.221)
C5': (9.144,135.143,44.126)
O4': (8.115,136.535,45.811)
C8: (6.740,138.209,44.140)
O2': (6.296,134.780,47.487)
C6: (3.777,140.098,44.270)
C5: (4.913,139.269,44.357)
C4: (4.997,138.422,45.450)
P: (8.836,135.587,41.538)
C4': (8.275,135.166,45.357)
C2': (6.086,135.388,46.227)
C2: (3.068,139.124,46.244)
N1: (2.852,139.994,45.248)
N3: (4.098,138.301,46.440)
N6: (3.569,140.977,43.284)
N7: (6.020,139.122,43.537)
N9: (6.188,137.748,45.311)
O5': (8.517,135.894,43.068)
O3': (6.809,133.252,45.256)
Image (generated by PyMOL):