Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2921:2624
Extra
PDB:
ATOM 1 O3' G A 920 -56.464 10.663 117.698 1.00 73.07 O
ATOM 2 P A A 921 -57.496 11.672 117.009 1.00 74.25 P
ATOM 3 OP1 A A 921 -57.131 13.043 117.461 1.00 73.95 O
ATOM 4 OP2 A A 921 -58.867 11.166 117.279 1.00 75.16 O
ATOM 5 O5' A A 921 -57.168 11.515 115.473 1.00 73.13 O
ATOM 6 C5' A A 921 -58.101 11.930 114.504 1.00 72.70 C
ATOM 7 C4' A A 921 -57.427 12.217 113.212 1.00 71.51 C
ATOM 8 O4' A A 921 -56.291 13.088 113.438 1.00 70.93 O
ATOM 9 C3' A A 921 -56.808 11.028 112.508 1.00 71.26 C
ATOM 10 O3' A A 921 -57.765 10.196 111.859 1.00 71.53 O
ATOM 11 C2' A A 921 -55.831 11.709 111.552 1.00 70.07 C
ATOM 12 O2' A A 921 -56.531 12.235 110.423 1.00 69.48 O
ATOM 13 C1' A A 921 -55.340 12.889 112.406 1.00 70.01 C
ATOM 14 N9 A A 921 -54.016 12.653 113.009 1.00 70.01 N
ATOM 15 C8 A A 921 -53.786 12.298 114.304 1.00 70.89 C
ATOM 16 N7 A A 921 -52.521 12.163 114.613 1.00 70.74 N
ATOM 17 C5 A A 921 -51.858 12.474 113.442 1.00 69.67 C
ATOM 18 C6 A A 921 -50.485 12.526 113.140 1.00 69.06 C
ATOM 19 N6 A A 921 -49.549 12.249 114.056 1.00 69.50 N
ATOM 20 N1 A A 921 -50.118 12.859 111.878 1.00 68.06 N
ATOM 21 C2 A A 921 -51.087 13.138 111.001 1.00 67.71 C
ATOM 22 N3 A A 921 -52.410 13.126 111.179 1.00 68.21 N
ATOM 23 C4 A A 921 -52.757 12.778 112.436 1.00 69.21 C
ATOM 24 P A A 922 -57.884 8.646 112.263 1.00 73.18 P
ATOM 25 OP1 A A 922 -59.326 8.308 112.251 1.00 73.87 O
ATOM 26 OP2 A A 922 -57.129 8.473 113.514 1.00 73.75 O
ATOM 27 O5' A A 922 -57.122 7.889 111.077 1.00 72.48 O
TER
ATOM 1 O3' G B 623 -55.406 10.705 102.484 1.00 64.75 O
ATOM 2 P C B 624 -56.032 12.150 102.819 1.00 62.62 P
ATOM 3 OP1 C B 624 -57.512 12.039 102.745 1.00 63.19 O
ATOM 4 OP2 C B 624 -55.347 13.123 101.951 1.00 61.68 O
ATOM 5 O5' C B 624 -55.590 12.379 104.316 1.00 63.06 O
ATOM 6 C5' C B 624 -55.828 11.387 105.292 1.00 63.96 C
ATOM 7 C4' C B 624 -55.142 11.722 106.577 1.00 64.23 C
ATOM 8 O4' C B 624 -53.713 11.642 106.391 1.00 63.68 O
ATOM 9 C3' C B 624 -55.371 13.126 107.087 1.00 64.10 C
ATOM 10 O3' C B 624 -56.577 13.253 107.797 1.00 64.87 O
ATOM 11 C2' C B 624 -54.142 13.362 107.938 1.00 64.04 C
ATOM 12 O2' C B 624 -54.259 12.680 109.162 1.00 64.98 O
ATOM 13 C1' C B 624 -53.080 12.659 107.119 1.00 63.50 C
ATOM 14 N1 C B 624 -52.425 13.564 106.168 1.00 62.50 N
ATOM 15 C2 C B 624 -51.385 14.405 106.626 1.00 62.14 C
ATOM 16 O2 C B 624 -51.089 14.369 107.842 1.00 62.70 O
ATOM 17 N3 C B 624 -50.742 15.218 105.741 1.00 61.26 N
ATOM 18 C4 C B 624 -51.128 15.185 104.464 1.00 60.77 C
ATOM 19 N4 C B 624 -50.532 15.970 103.582 1.00 59.95 N
ATOM 20 C5 C B 624 -52.175 14.337 104.005 1.00 61.13 C
ATOM 21 C6 C B 624 -52.797 13.540 104.866 1.00 61.99 C
ATOM 22 P U B 625 -57.492 14.552 107.626 1.00 70.90 P
ATOM 23 OP1 U B 625 -58.847 14.185 108.143 1.00 71.82 O
ATOM 24 OP2 U B 625 -57.356 15.015 106.222 1.00 69.99 O
ATOM 25 O5' U B 625 -56.810 15.591 108.611 1.00 70.85 O
TER
ATOM 2 P A A 921 -57.496 11.672 117.009 1.00 74.25 P
ATOM 3 OP1 A A 921 -57.131 13.043 117.461 1.00 73.95 O
ATOM 4 OP2 A A 921 -58.867 11.166 117.279 1.00 75.16 O
ATOM 5 O5' A A 921 -57.168 11.515 115.473 1.00 73.13 O
ATOM 6 C5' A A 921 -58.101 11.930 114.504 1.00 72.70 C
ATOM 7 C4' A A 921 -57.427 12.217 113.212 1.00 71.51 C
ATOM 8 O4' A A 921 -56.291 13.088 113.438 1.00 70.93 O
ATOM 9 C3' A A 921 -56.808 11.028 112.508 1.00 71.26 C
ATOM 10 O3' A A 921 -57.765 10.196 111.859 1.00 71.53 O
ATOM 11 C2' A A 921 -55.831 11.709 111.552 1.00 70.07 C
ATOM 12 O2' A A 921 -56.531 12.235 110.423 1.00 69.48 O
ATOM 13 C1' A A 921 -55.340 12.889 112.406 1.00 70.01 C
ATOM 14 N9 A A 921 -54.016 12.653 113.009 1.00 70.01 N
ATOM 15 C8 A A 921 -53.786 12.298 114.304 1.00 70.89 C
ATOM 16 N7 A A 921 -52.521 12.163 114.613 1.00 70.74 N
ATOM 17 C5 A A 921 -51.858 12.474 113.442 1.00 69.67 C
ATOM 18 C6 A A 921 -50.485 12.526 113.140 1.00 69.06 C
ATOM 19 N6 A A 921 -49.549 12.249 114.056 1.00 69.50 N
ATOM 20 N1 A A 921 -50.118 12.859 111.878 1.00 68.06 N
ATOM 21 C2 A A 921 -51.087 13.138 111.001 1.00 67.71 C
ATOM 22 N3 A A 921 -52.410 13.126 111.179 1.00 68.21 N
ATOM 23 C4 A A 921 -52.757 12.778 112.436 1.00 69.21 C
ATOM 24 P A A 922 -57.884 8.646 112.263 1.00 73.18 P
ATOM 25 OP1 A A 922 -59.326 8.308 112.251 1.00 73.87 O
ATOM 26 OP2 A A 922 -57.129 8.473 113.514 1.00 73.75 O
ATOM 27 O5' A A 922 -57.122 7.889 111.077 1.00 72.48 O
TER
ATOM 1 O3' G B 623 -55.406 10.705 102.484 1.00 64.75 O
ATOM 2 P C B 624 -56.032 12.150 102.819 1.00 62.62 P
ATOM 3 OP1 C B 624 -57.512 12.039 102.745 1.00 63.19 O
ATOM 4 OP2 C B 624 -55.347 13.123 101.951 1.00 61.68 O
ATOM 5 O5' C B 624 -55.590 12.379 104.316 1.00 63.06 O
ATOM 6 C5' C B 624 -55.828 11.387 105.292 1.00 63.96 C
ATOM 7 C4' C B 624 -55.142 11.722 106.577 1.00 64.23 C
ATOM 8 O4' C B 624 -53.713 11.642 106.391 1.00 63.68 O
ATOM 9 C3' C B 624 -55.371 13.126 107.087 1.00 64.10 C
ATOM 10 O3' C B 624 -56.577 13.253 107.797 1.00 64.87 O
ATOM 11 C2' C B 624 -54.142 13.362 107.938 1.00 64.04 C
ATOM 12 O2' C B 624 -54.259 12.680 109.162 1.00 64.98 O
ATOM 13 C1' C B 624 -53.080 12.659 107.119 1.00 63.50 C
ATOM 14 N1 C B 624 -52.425 13.564 106.168 1.00 62.50 N
ATOM 15 C2 C B 624 -51.385 14.405 106.626 1.00 62.14 C
ATOM 16 O2 C B 624 -51.089 14.369 107.842 1.00 62.70 O
ATOM 17 N3 C B 624 -50.742 15.218 105.741 1.00 61.26 N
ATOM 18 C4 C B 624 -51.128 15.185 104.464 1.00 60.77 C
ATOM 19 N4 C B 624 -50.532 15.970 103.582 1.00 59.95 N
ATOM 20 C5 C B 624 -52.175 14.337 104.005 1.00 61.13 C
ATOM 21 C6 C B 624 -52.797 13.540 104.866 1.00 61.99 C
ATOM 22 P U B 625 -57.492 14.552 107.626 1.00 70.90 P
ATOM 23 OP1 U B 625 -58.847 14.185 108.143 1.00 71.82 O
ATOM 24 OP2 U B 625 -57.356 15.015 106.222 1.00 69.99 O
ATOM 25 O5' U B 625 -56.810 15.591 108.611 1.00 70.85 O
TER
Atoms:
OP1: (-57.131,13.043,117.461)
OP2: (-58.867,11.166,117.279)
C3': (-56.808,11.028,112.508)
C1': (-55.340,12.889,112.406)
C5': (-58.101,11.930,114.504)
O4': (-56.291,13.088,113.438)
C8: (-53.786,12.298,114.304)
O2': (-56.531,12.235,110.423)
C6: (-50.485,12.526,113.140)
C5: (-51.858,12.474,113.442)
C4: (-52.757,12.778,112.436)
P: (-57.496,11.672,117.009)
C4': (-57.427,12.217,113.212)
C2': (-55.831,11.709,111.552)
C2: (-51.087,13.138,111.001)
N1: (-50.118,12.859,111.878)
N3: (-52.410,13.126,111.179)
N6: (-49.549,12.249,114.056)
N7: (-52.521,12.163,114.613)
N9: (-54.016,12.653,113.009)
O5': (-57.168,11.515,115.473)
O3': (-57.765,10.196,111.859)
OP2: (-58.867,11.166,117.279)
C3': (-56.808,11.028,112.508)
C1': (-55.340,12.889,112.406)
C5': (-58.101,11.930,114.504)
O4': (-56.291,13.088,113.438)
C8: (-53.786,12.298,114.304)
O2': (-56.531,12.235,110.423)
C6: (-50.485,12.526,113.140)
C5: (-51.858,12.474,113.442)
C4: (-52.757,12.778,112.436)
P: (-57.496,11.672,117.009)
C4': (-57.427,12.217,113.212)
C2': (-55.831,11.709,111.552)
C2: (-51.087,13.138,111.001)
N1: (-50.118,12.859,111.878)
N3: (-52.410,13.126,111.179)
N6: (-49.549,12.249,114.056)
N7: (-52.521,12.163,114.613)
N9: (-54.016,12.653,113.009)
O5': (-57.168,11.515,115.473)
O3': (-57.765,10.196,111.859)
C2: (-51.385,14.405,106.626)
OP1: (-57.512,12.039,102.745)
OP2: (-55.347,13.123,101.951)
C4: (-51.128,15.185,104.464)
O5': (-55.590,12.379,104.316)
C3': (-55.371,13.126,107.087)
C1': (-53.080,12.659,107.119)
O4': (-53.713,11.642,106.391)
C5': (-55.828,11.387,105.292)
P: (-56.032,12.150,102.819)
O2: (-51.089,14.369,107.842)
C4': (-55.142,11.722,106.577)
C2': (-54.142,13.362,107.938)
O2': (-54.259,12.680,109.162)
N1: (-52.425,13.564,106.168)
N3: (-50.742,15.218,105.741)
N4: (-50.532,15.970,103.582)
C6: (-52.797,13.540,104.866)
C5: (-52.175,14.337,104.005)
O3': (-56.577,13.253,107.797)
OP1: (-57.512,12.039,102.745)
OP2: (-55.347,13.123,101.951)
C4: (-51.128,15.185,104.464)
O5': (-55.590,12.379,104.316)
C3': (-55.371,13.126,107.087)
C1': (-53.080,12.659,107.119)
O4': (-53.713,11.642,106.391)
C5': (-55.828,11.387,105.292)
P: (-56.032,12.150,102.819)
O2: (-51.089,14.369,107.842)
C4': (-55.142,11.722,106.577)
C2': (-54.142,13.362,107.938)
O2': (-54.259,12.680,109.162)
N1: (-52.425,13.564,106.168)
N3: (-50.742,15.218,105.741)
N4: (-50.532,15.970,103.582)
C6: (-52.797,13.540,104.866)
C5: (-52.175,14.337,104.005)
O3': (-56.577,13.253,107.797)
Image (generated by PyMOL):