Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0251:0252
Extra
PDB:
ATOM 1 O3' A A 250 99.903 119.520 1.942 1.00 50.22 O
ATOM 2 P U A 251 101.051 119.409 3.059 1.00 51.19 P
ATOM 3 OP1 U A 251 101.818 120.680 3.123 1.00 49.43 O
ATOM 4 OP2 U A 251 101.771 118.125 2.827 1.00 50.02 O
ATOM 5 O5' U A 251 100.236 119.268 4.417 1.00 52.48 O
ATOM 6 C5' U A 251 99.571 118.035 4.759 1.00 50.44 C
ATOM 7 C4' U A 251 98.833 118.195 6.064 1.00 48.80 C
ATOM 8 O4' U A 251 99.791 118.495 7.114 1.00 48.84 O
ATOM 9 C3' U A 251 97.816 119.325 6.090 1.00 47.84 C
ATOM 10 O3' U A 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 11 C2' U A 251 98.617 120.485 6.677 1.00 48.63 C
ATOM 12 O2' U A 251 97.809 121.454 7.313 1.00 49.46 O
ATOM 13 C1' U A 251 99.505 119.758 7.683 1.00 48.28 C
ATOM 14 N1 U A 251 100.786 120.413 7.994 1.00 49.22 N
ATOM 15 C2 U A 251 101.013 120.803 9.308 1.00 50.42 C
ATOM 16 O2 U A 251 100.184 120.687 10.190 1.00 51.76 O
ATOM 17 N3 U A 251 102.250 121.339 9.552 1.00 51.66 N
ATOM 18 C4 U A 251 103.261 121.545 8.640 1.00 52.01 C
ATOM 19 O4 U A 251 104.339 122.003 9.029 1.00 53.06 O
ATOM 20 C5 U A 251 102.944 121.153 7.299 1.00 50.83 C
ATOM 21 C6 U A 251 101.747 120.615 7.028 1.00 49.46 C
ATOM 22 P G A 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 23 OP1 G A 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 24 OP2 G A 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 25 O5' G A 252 95.345 118.890 4.853 1.00 49.45 O
TER
ATOM 1 O3' U B 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 2 P G B 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 3 OP1 G B 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 4 OP2 G B 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 5 O5' G B 252 95.345 118.890 4.853 1.00 49.45 O
ATOM 6 C5' G B 252 94.875 120.236 4.730 1.00 48.91 C
ATOM 7 C4' G B 252 93.821 120.295 3.664 1.00 49.30 C
ATOM 8 O4' G B 252 94.430 119.937 2.393 1.00 50.28 O
ATOM 9 C3' G B 252 92.676 119.314 3.876 1.00 49.15 C
ATOM 10 O3' G B 252 91.447 119.844 3.430 1.00 49.35 O
ATOM 11 C2' G B 252 93.106 118.081 3.084 1.00 49.75 C
ATOM 12 O2' G B 252 92.022 117.321 2.580 1.00 48.11 O
ATOM 13 C1' G B 252 93.947 118.677 1.953 1.00 49.54 C
ATOM 14 N9 G B 252 95.101 117.828 1.648 1.00 49.74 N
ATOM 15 C8 G B 252 95.883 117.142 2.551 1.00 48.50 C
ATOM 16 N7 G B 252 96.813 116.424 1.986 1.00 48.33 N
ATOM 17 C5 G B 252 96.650 116.653 0.626 1.00 50.01 C
ATOM 18 C6 G B 252 97.368 116.132 -0.494 1.00 50.56 C
ATOM 19 O6 G B 252 98.313 115.322 -0.506 1.00 49.36 O
ATOM 20 N1 G B 252 96.882 116.646 -1.692 1.00 50.64 N
ATOM 21 C2 G B 252 95.846 117.541 -1.807 1.00 50.23 C
ATOM 22 N2 G B 252 95.550 117.940 -3.051 1.00 50.18 N
ATOM 23 N3 G B 252 95.158 118.015 -0.780 1.00 50.32 N
ATOM 24 C4 G B 252 95.609 117.533 0.399 1.00 50.22 C
ATOM 25 P U B 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 26 OP1 U B 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 27 OP2 U B 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 28 O5' U B 253 89.028 120.531 3.638 1.00 47.80 O
TER
ATOM 2 P U A 251 101.051 119.409 3.059 1.00 51.19 P
ATOM 3 OP1 U A 251 101.818 120.680 3.123 1.00 49.43 O
ATOM 4 OP2 U A 251 101.771 118.125 2.827 1.00 50.02 O
ATOM 5 O5' U A 251 100.236 119.268 4.417 1.00 52.48 O
ATOM 6 C5' U A 251 99.571 118.035 4.759 1.00 50.44 C
ATOM 7 C4' U A 251 98.833 118.195 6.064 1.00 48.80 C
ATOM 8 O4' U A 251 99.791 118.495 7.114 1.00 48.84 O
ATOM 9 C3' U A 251 97.816 119.325 6.090 1.00 47.84 C
ATOM 10 O3' U A 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 11 C2' U A 251 98.617 120.485 6.677 1.00 48.63 C
ATOM 12 O2' U A 251 97.809 121.454 7.313 1.00 49.46 O
ATOM 13 C1' U A 251 99.505 119.758 7.683 1.00 48.28 C
ATOM 14 N1 U A 251 100.786 120.413 7.994 1.00 49.22 N
ATOM 15 C2 U A 251 101.013 120.803 9.308 1.00 50.42 C
ATOM 16 O2 U A 251 100.184 120.687 10.190 1.00 51.76 O
ATOM 17 N3 U A 251 102.250 121.339 9.552 1.00 51.66 N
ATOM 18 C4 U A 251 103.261 121.545 8.640 1.00 52.01 C
ATOM 19 O4 U A 251 104.339 122.003 9.029 1.00 53.06 O
ATOM 20 C5 U A 251 102.944 121.153 7.299 1.00 50.83 C
ATOM 21 C6 U A 251 101.747 120.615 7.028 1.00 49.46 C
ATOM 22 P G A 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 23 OP1 G A 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 24 OP2 G A 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 25 O5' G A 252 95.345 118.890 4.853 1.00 49.45 O
TER
ATOM 1 O3' U B 251 96.731 118.945 6.925 1.00 48.38 O
ATOM 2 P G B 252 95.466 118.199 6.275 1.00 48.83 P
ATOM 3 OP1 G B 252 94.242 118.544 7.037 1.00 49.17 O
ATOM 4 OP2 G B 252 95.818 116.775 6.059 1.00 47.66 O
ATOM 5 O5' G B 252 95.345 118.890 4.853 1.00 49.45 O
ATOM 6 C5' G B 252 94.875 120.236 4.730 1.00 48.91 C
ATOM 7 C4' G B 252 93.821 120.295 3.664 1.00 49.30 C
ATOM 8 O4' G B 252 94.430 119.937 2.393 1.00 50.28 O
ATOM 9 C3' G B 252 92.676 119.314 3.876 1.00 49.15 C
ATOM 10 O3' G B 252 91.447 119.844 3.430 1.00 49.35 O
ATOM 11 C2' G B 252 93.106 118.081 3.084 1.00 49.75 C
ATOM 12 O2' G B 252 92.022 117.321 2.580 1.00 48.11 O
ATOM 13 C1' G B 252 93.947 118.677 1.953 1.00 49.54 C
ATOM 14 N9 G B 252 95.101 117.828 1.648 1.00 49.74 N
ATOM 15 C8 G B 252 95.883 117.142 2.551 1.00 48.50 C
ATOM 16 N7 G B 252 96.813 116.424 1.986 1.00 48.33 N
ATOM 17 C5 G B 252 96.650 116.653 0.626 1.00 50.01 C
ATOM 18 C6 G B 252 97.368 116.132 -0.494 1.00 50.56 C
ATOM 19 O6 G B 252 98.313 115.322 -0.506 1.00 49.36 O
ATOM 20 N1 G B 252 96.882 116.646 -1.692 1.00 50.64 N
ATOM 21 C2 G B 252 95.846 117.541 -1.807 1.00 50.23 C
ATOM 22 N2 G B 252 95.550 117.940 -3.051 1.00 50.18 N
ATOM 23 N3 G B 252 95.158 118.015 -0.780 1.00 50.32 N
ATOM 24 C4 G B 252 95.609 117.533 0.399 1.00 50.22 C
ATOM 25 P U B 253 90.134 119.608 4.318 1.00 48.29 P
ATOM 26 OP1 U B 253 90.447 120.145 5.662 1.00 49.65 O
ATOM 27 OP2 U B 253 89.725 118.190 4.174 1.00 47.68 O
ATOM 28 O5' U B 253 89.028 120.531 3.638 1.00 47.80 O
TER
Atoms:
C4: (103.261,121.545,8.640)
N3: (102.250,121.339,9.552)
OP1: (101.818,120.680,3.123)
OP2: (101.771,118.125,2.827)
C2: (101.013,120.803,9.308)
C1': (99.505,119.758,7.683)
C3': (97.816,119.325,6.090)
O5': (100.236,119.268,4.417)
O4': (99.791,118.495,7.114)
C5': (99.571,118.035,4.759)
P: (101.051,119.409,3.059)
C4': (98.833,118.195,6.064)
C2': (98.617,120.485,6.677)
O2': (97.809,121.454,7.313)
N1: (100.786,120.413,7.994)
O4: (104.339,122.003,9.029)
O2: (100.184,120.687,10.190)
C6: (101.747,120.615,7.028)
C5: (102.944,121.153,7.299)
O3': (96.731,118.945,6.925)
N3: (102.250,121.339,9.552)
OP1: (101.818,120.680,3.123)
OP2: (101.771,118.125,2.827)
C2: (101.013,120.803,9.308)
C1': (99.505,119.758,7.683)
C3': (97.816,119.325,6.090)
O5': (100.236,119.268,4.417)
O4': (99.791,118.495,7.114)
C5': (99.571,118.035,4.759)
P: (101.051,119.409,3.059)
C4': (98.833,118.195,6.064)
C2': (98.617,120.485,6.677)
O2': (97.809,121.454,7.313)
N1: (100.786,120.413,7.994)
O4: (104.339,122.003,9.029)
O2: (100.184,120.687,10.190)
C6: (101.747,120.615,7.028)
C5: (102.944,121.153,7.299)
O3': (96.731,118.945,6.925)
OP1: (94.242,118.544,7.037)
OP2: (95.818,116.775,6.059)
C3': (92.676,119.314,3.876)
C1': (93.947,118.677,1.953)
C5': (94.875,120.236,4.730)
O6: (98.313,115.322,-0.506)
O4': (94.430,119.937,2.393)
C8: (95.883,117.142,2.551)
C2: (95.846,117.541,-1.807)
C6: (97.368,116.132,-0.494)
C5: (96.650,116.653,0.626)
C4: (95.609,117.533,0.399)
P: (95.466,118.199,6.275)
C4': (93.821,120.295,3.664)
C2': (93.106,118.081,3.084)
O2': (92.022,117.321,2.580)
N1: (96.882,116.646,-1.692)
N2: (95.550,117.940,-3.051)
N3: (95.158,118.015,-0.780)
N7: (96.813,116.424,1.986)
N9: (95.101,117.828,1.648)
O5': (95.345,118.890,4.853)
O3': (91.447,119.844,3.430)
OP2: (95.818,116.775,6.059)
C3': (92.676,119.314,3.876)
C1': (93.947,118.677,1.953)
C5': (94.875,120.236,4.730)
O6: (98.313,115.322,-0.506)
O4': (94.430,119.937,2.393)
C8: (95.883,117.142,2.551)
C2: (95.846,117.541,-1.807)
C6: (97.368,116.132,-0.494)
C5: (96.650,116.653,0.626)
C4: (95.609,117.533,0.399)
P: (95.466,118.199,6.275)
C4': (93.821,120.295,3.664)
C2': (93.106,118.081,3.084)
O2': (92.022,117.321,2.580)
N1: (96.882,116.646,-1.692)
N2: (95.550,117.940,-3.051)
N3: (95.158,118.015,-0.780)
N7: (96.813,116.424,1.986)
N9: (95.101,117.828,1.648)
O5': (95.345,118.890,4.853)
O3': (91.447,119.844,3.430)
Image (generated by PyMOL):