ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4B:B44:B45

Extra

PDB:
ATOM 1 O3' G A 43 39.994 1.255 12.974 1.00 32.10 O
ATOM 2 P U A 44 39.192 0.984 11.601 1.00 31.95 P
ATOM 3 OP1 U A 44 38.410 -0.264 11.760 1.00 31.74 O
ATOM 4 OP2 U A 44 40.150 1.107 10.480 1.00 32.13 O
ATOM 5 O5' U A 44 38.209 2.241 11.499 1.00 33.00 O
ATOM 6 C5' U A 44 36.873 2.118 11.008 1.00 34.03 C
ATOM 7 C4' U A 44 35.959 3.040 11.781 1.00 34.07 C
ATOM 8 O4' U A 44 36.092 2.713 13.175 1.00 35.25 O
ATOM 9 C3' U A 44 36.334 4.514 11.684 1.00 33.74 C
ATOM 10 O3' U A 44 35.581 5.274 10.703 1.00 34.27 O
ATOM 11 C2' U A 44 36.023 5.096 13.070 1.00 33.69 C
ATOM 12 O2' U A 44 34.861 5.866 13.104 1.00 32.86 O
ATOM 13 C1' U A 44 35.781 3.856 13.924 1.00 35.25 C
ATOM 14 N1 U A 44 36.391 3.776 15.259 1.00 36.22 N
ATOM 15 C2 U A 44 35.611 4.212 16.317 1.00 36.40 C
ATOM 16 O2 U A 44 34.499 4.701 16.162 1.00 37.80 O
ATOM 17 N3 U A 44 36.173 4.056 17.558 1.00 36.23 N
ATOM 18 C4 U A 44 37.413 3.536 17.846 1.00 37.03 C
ATOM 19 O4 U A 44 37.773 3.455 19.023 1.00 38.45 O
ATOM 20 C5 U A 44 38.175 3.131 16.697 1.00 37.13 C
ATOM 21 C6 U A 44 37.651 3.268 15.470 1.00 36.15 C
ATOM 22 P G A 45 34.272 4.656 9.944 1.00 31.72 P
ATOM 23 OP1 G A 45 33.094 4.742 10.827 1.00 31.19 O
ATOM 24 OP2 G A 45 34.591 3.366 9.276 1.00 33.47 O
ATOM 25 O5' G A 45 34.026 5.708 8.782 1.00 30.45 O
TER

ATOM 1 O3' U B 44 35.581 5.274 10.703 1.00 34.27 O
ATOM 2 P G B 45 34.272 4.656 9.944 1.00 31.72 P
ATOM 3 OP1 G B 45 33.094 4.742 10.827 1.00 31.19 O
ATOM 4 OP2 G B 45 34.591 3.366 9.276 1.00 33.47 O
ATOM 5 O5' G B 45 34.026 5.708 8.782 1.00 30.45 O
ATOM 6 C5' G B 45 34.056 7.105 9.053 1.00 29.01 C
ATOM 7 C4' G B 45 34.998 7.809 8.105 1.00 28.18 C
ATOM 8 O4' G B 45 36.372 7.493 8.426 1.00 28.03 O
ATOM 9 C3' G B 45 34.874 7.438 6.640 1.00 28.41 C
ATOM 10 O3' G B 45 33.801 8.144 6.044 1.00 29.23 O
ATOM 11 C2' G B 45 36.220 7.877 6.084 1.00 28.18 C
ATOM 12 O2' G B 45 36.259 9.275 5.864 1.00 26.67 O
ATOM 13 C1' G B 45 37.155 7.509 7.239 1.00 28.33 C
ATOM 14 N9 G B 45 37.814 6.212 7.123 1.00 29.26 N
ATOM 15 C8 G B 45 37.548 5.100 7.884 1.00 31.13 C
ATOM 16 N7 G B 45 38.327 4.090 7.611 1.00 32.86 N
ATOM 17 C5 G B 45 39.151 4.555 6.597 1.00 30.34 C
ATOM 18 C6 G B 45 40.199 3.901 5.902 1.00 30.70 C
ATOM 19 O6 G B 45 40.632 2.745 6.058 1.00 30.65 O
ATOM 20 N1 G B 45 40.764 4.728 4.944 1.00 30.47 N
ATOM 21 C2 G B 45 40.376 6.018 4.690 1.00 31.06 C
ATOM 22 N2 G B 45 41.051 6.643 3.717 1.00 33.26 N
ATOM 23 N3 G B 45 39.403 6.645 5.337 1.00 29.56 N
ATOM 24 C4 G B 45 38.839 5.859 6.271 1.00 29.28 C
ATOM 25 P C B 46 32.912 7.424 4.924 1.00 29.21 P
ATOM 26 OP1 C B 46 31.849 8.370 4.506 1.00 30.57 O
ATOM 27 OP2 C B 46 32.530 6.078 5.423 1.00 29.22 O
ATOM 28 O5' C B 46 33.939 7.248 3.718 1.00 29.69 O
TER

Atoms:
C4: (37.413,3.536,17.846)
N3: (36.173,4.056,17.558)
OP1: (38.410,-0.264,11.760)
OP2: (40.150,1.107,10.480)
C2: (35.611,4.212,16.317)
C1': (35.781,3.856,13.924)
C3': (36.334,4.514,11.684)
O5': (38.209,2.241,11.499)
O4': (36.092,2.713,13.175)
C5': (36.873,2.118,11.008)
P: (39.192,0.984,11.601)
C4': (35.959,3.040,11.781)
C2': (36.023,5.096,13.070)
O2': (34.861,5.866,13.104)
N1: (36.391,3.776,15.259)
O4: (37.773,3.455,19.023)
O2: (34.499,4.701,16.162)
C6: (37.651,3.268,15.470)
C5: (38.175,3.131,16.697)
O3': (35.581,5.274,10.703)
OP1: (33.094,4.742,10.827)
OP2: (34.591,3.366,9.276)
C3': (34.874,7.438,6.640)
C1': (37.155,7.509,7.239)
C5': (34.056,7.105,9.053)
O6: (40.632,2.745,6.058)
O4': (36.372,7.493,8.426)
C8: (37.548,5.100,7.884)
C2: (40.376,6.018,4.690)
C6: (40.199,3.901,5.902)
C5: (39.151,4.555,6.597)
C4: (38.839,5.859,6.271)
P: (34.272,4.656,9.944)
C4': (34.998,7.809,8.105)
C2': (36.220,7.877,6.084)
O2': (36.259,9.275,5.864)
N1: (40.764,4.728,4.944)
N2: (41.051,6.643,3.717)
N3: (39.403,6.645,5.337)
N7: (38.327,4.090,7.611)
N9: (37.814,6.212,7.123)
O5': (34.026,5.708,8.782)
O3': (33.801,8.144,6.044)
Image (generated by PyMOL):
PyMOL image
show in jmol