Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.385 98.658 122.077 1.00 65.88 O
ATOM 2 P C A 559 -4.670 97.695 123.335 1.00 66.93 P
ATOM 3 OP1 C A 559 -4.018 98.291 124.529 1.00 66.66 O
ATOM 4 OP2 C A 559 -4.358 96.292 122.948 1.00 66.31 O
ATOM 5 O5' C A 559 -6.243 97.793 123.532 1.00 68.29 O
ATOM 6 C5' C A 559 -6.893 99.060 123.699 1.00 68.63 C
ATOM 7 C4' C A 559 -8.376 98.898 123.494 1.00 70.37 C
ATOM 8 O4' C A 559 -8.623 98.475 122.127 1.00 69.35 O
ATOM 9 C3' C A 559 -9.017 97.805 124.333 1.00 71.66 C
ATOM 10 O3' C A 559 -9.312 98.254 125.653 1.00 73.99 O
ATOM 11 C2' C A 559 -10.263 97.471 123.527 1.00 70.71 C
ATOM 12 O2' C A 559 -11.287 98.427 123.719 1.00 71.78 O
ATOM 13 C1' C A 559 -9.729 97.587 122.095 1.00 68.87 C
ATOM 14 N1 C A 559 -9.295 96.303 121.506 1.00 66.66 N
ATOM 15 C2 C A 559 -10.255 95.486 120.880 1.00 66.40 C
ATOM 16 O2 C A 559 -11.438 95.864 120.837 1.00 66.37 O
ATOM 17 N3 C A 559 -9.868 94.303 120.340 1.00 65.09 N
ATOM 18 C4 C A 559 -8.590 93.923 120.411 1.00 63.87 C
ATOM 19 N4 C A 559 -8.258 92.742 119.874 1.00 61.79 N
ATOM 20 C5 C A 559 -7.596 94.734 121.037 1.00 63.88 C
ATOM 21 C6 C A 559 -7.987 95.904 121.563 1.00 65.20 C
ATOM 22 P G A 560 -9.154 97.238 126.889 1.00 76.05 P
ATOM 23 OP1 G A 560 -9.612 97.960 128.100 1.00 75.95 O
ATOM 24 OP2 G A 560 -7.786 96.658 126.859 1.00 76.42 O
ATOM 25 O5' G A 560 -10.199 96.080 126.558 1.00 76.56 O
TER
ATOM 1 O3' C B 573 -10.429 83.501 116.464 1.00 62.46 O
ATOM 2 P C B 574 -10.368 84.277 115.056 1.00 63.05 P
ATOM 3 OP1 C B 574 -11.265 83.578 114.103 1.00 63.30 O
ATOM 4 OP2 C B 574 -8.939 84.456 114.706 1.00 65.83 O
ATOM 5 O5' C B 574 -10.979 85.709 115.394 1.00 62.52 O
ATOM 6 C5' C B 574 -12.338 85.849 115.845 1.00 61.65 C
ATOM 7 C4' C B 574 -12.583 87.250 116.354 1.00 61.21 C
ATOM 8 O4' C B 574 -11.785 87.494 117.538 1.00 62.52 O
ATOM 9 C3' C B 574 -12.206 88.377 115.412 1.00 62.10 C
ATOM 10 O3' C B 574 -13.244 88.600 114.465 1.00 63.56 O
ATOM 11 C2' C B 574 -12.028 89.550 116.369 1.00 62.73 C
ATOM 12 O2' C B 574 -13.248 90.132 116.770 1.00 65.18 O
ATOM 13 C1' C B 574 -11.399 88.860 117.583 1.00 62.08 C
ATOM 14 N1 C B 574 -9.923 88.938 117.605 1.00 62.48 N
ATOM 15 C2 C B 574 -9.300 90.054 118.208 1.00 62.35 C
ATOM 16 O2 C B 574 -10.003 90.947 118.718 1.00 61.76 O
ATOM 17 N3 C B 574 -7.949 90.128 118.212 1.00 61.49 N
ATOM 18 C4 C B 574 -7.224 89.159 117.646 1.00 60.57 C
ATOM 19 N4 C B 574 -5.894 89.281 117.662 1.00 59.75 N
ATOM 20 C5 C B 574 -7.828 88.020 117.036 1.00 60.31 C
ATOM 21 C6 C B 574 -9.163 87.949 117.041 1.00 60.74 C
ATOM 22 P A B 575 -12.894 89.186 113.008 1.00 63.98 P
ATOM 23 OP1 A B 575 -12.367 90.563 113.188 1.00 65.44 O
ATOM 24 OP2 A B 575 -14.081 88.966 112.143 1.00 65.18 O
ATOM 25 O5' A B 575 -11.730 88.240 112.475 1.00 62.59 O
TER
ATOM 2 P C A 559 -4.670 97.695 123.335 1.00 66.93 P
ATOM 3 OP1 C A 559 -4.018 98.291 124.529 1.00 66.66 O
ATOM 4 OP2 C A 559 -4.358 96.292 122.948 1.00 66.31 O
ATOM 5 O5' C A 559 -6.243 97.793 123.532 1.00 68.29 O
ATOM 6 C5' C A 559 -6.893 99.060 123.699 1.00 68.63 C
ATOM 7 C4' C A 559 -8.376 98.898 123.494 1.00 70.37 C
ATOM 8 O4' C A 559 -8.623 98.475 122.127 1.00 69.35 O
ATOM 9 C3' C A 559 -9.017 97.805 124.333 1.00 71.66 C
ATOM 10 O3' C A 559 -9.312 98.254 125.653 1.00 73.99 O
ATOM 11 C2' C A 559 -10.263 97.471 123.527 1.00 70.71 C
ATOM 12 O2' C A 559 -11.287 98.427 123.719 1.00 71.78 O
ATOM 13 C1' C A 559 -9.729 97.587 122.095 1.00 68.87 C
ATOM 14 N1 C A 559 -9.295 96.303 121.506 1.00 66.66 N
ATOM 15 C2 C A 559 -10.255 95.486 120.880 1.00 66.40 C
ATOM 16 O2 C A 559 -11.438 95.864 120.837 1.00 66.37 O
ATOM 17 N3 C A 559 -9.868 94.303 120.340 1.00 65.09 N
ATOM 18 C4 C A 559 -8.590 93.923 120.411 1.00 63.87 C
ATOM 19 N4 C A 559 -8.258 92.742 119.874 1.00 61.79 N
ATOM 20 C5 C A 559 -7.596 94.734 121.037 1.00 63.88 C
ATOM 21 C6 C A 559 -7.987 95.904 121.563 1.00 65.20 C
ATOM 22 P G A 560 -9.154 97.238 126.889 1.00 76.05 P
ATOM 23 OP1 G A 560 -9.612 97.960 128.100 1.00 75.95 O
ATOM 24 OP2 G A 560 -7.786 96.658 126.859 1.00 76.42 O
ATOM 25 O5' G A 560 -10.199 96.080 126.558 1.00 76.56 O
TER
ATOM 1 O3' C B 573 -10.429 83.501 116.464 1.00 62.46 O
ATOM 2 P C B 574 -10.368 84.277 115.056 1.00 63.05 P
ATOM 3 OP1 C B 574 -11.265 83.578 114.103 1.00 63.30 O
ATOM 4 OP2 C B 574 -8.939 84.456 114.706 1.00 65.83 O
ATOM 5 O5' C B 574 -10.979 85.709 115.394 1.00 62.52 O
ATOM 6 C5' C B 574 -12.338 85.849 115.845 1.00 61.65 C
ATOM 7 C4' C B 574 -12.583 87.250 116.354 1.00 61.21 C
ATOM 8 O4' C B 574 -11.785 87.494 117.538 1.00 62.52 O
ATOM 9 C3' C B 574 -12.206 88.377 115.412 1.00 62.10 C
ATOM 10 O3' C B 574 -13.244 88.600 114.465 1.00 63.56 O
ATOM 11 C2' C B 574 -12.028 89.550 116.369 1.00 62.73 C
ATOM 12 O2' C B 574 -13.248 90.132 116.770 1.00 65.18 O
ATOM 13 C1' C B 574 -11.399 88.860 117.583 1.00 62.08 C
ATOM 14 N1 C B 574 -9.923 88.938 117.605 1.00 62.48 N
ATOM 15 C2 C B 574 -9.300 90.054 118.208 1.00 62.35 C
ATOM 16 O2 C B 574 -10.003 90.947 118.718 1.00 61.76 O
ATOM 17 N3 C B 574 -7.949 90.128 118.212 1.00 61.49 N
ATOM 18 C4 C B 574 -7.224 89.159 117.646 1.00 60.57 C
ATOM 19 N4 C B 574 -5.894 89.281 117.662 1.00 59.75 N
ATOM 20 C5 C B 574 -7.828 88.020 117.036 1.00 60.31 C
ATOM 21 C6 C B 574 -9.163 87.949 117.041 1.00 60.74 C
ATOM 22 P A B 575 -12.894 89.186 113.008 1.00 63.98 P
ATOM 23 OP1 A B 575 -12.367 90.563 113.188 1.00 65.44 O
ATOM 24 OP2 A B 575 -14.081 88.966 112.143 1.00 65.18 O
ATOM 25 O5' A B 575 -11.730 88.240 112.475 1.00 62.59 O
TER
Atoms:
C2: (-10.255,95.486,120.880)
OP1: (-4.018,98.291,124.529)
OP2: (-4.358,96.292,122.948)
C4: (-8.590,93.923,120.411)
O5': (-6.243,97.793,123.532)
C3': (-9.017,97.805,124.333)
C1': (-9.729,97.587,122.095)
O4': (-8.623,98.475,122.127)
C5': (-6.893,99.060,123.699)
P: (-4.670,97.695,123.335)
O2: (-11.438,95.864,120.837)
C4': (-8.376,98.898,123.494)
C2': (-10.263,97.471,123.527)
O2': (-11.287,98.427,123.719)
N1: (-9.295,96.303,121.506)
N3: (-9.868,94.303,120.340)
N4: (-8.258,92.742,119.874)
C6: (-7.987,95.904,121.563)
C5: (-7.596,94.734,121.037)
O3': (-9.312,98.254,125.653)
OP1: (-4.018,98.291,124.529)
OP2: (-4.358,96.292,122.948)
C4: (-8.590,93.923,120.411)
O5': (-6.243,97.793,123.532)
C3': (-9.017,97.805,124.333)
C1': (-9.729,97.587,122.095)
O4': (-8.623,98.475,122.127)
C5': (-6.893,99.060,123.699)
P: (-4.670,97.695,123.335)
O2: (-11.438,95.864,120.837)
C4': (-8.376,98.898,123.494)
C2': (-10.263,97.471,123.527)
O2': (-11.287,98.427,123.719)
N1: (-9.295,96.303,121.506)
N3: (-9.868,94.303,120.340)
N4: (-8.258,92.742,119.874)
C6: (-7.987,95.904,121.563)
C5: (-7.596,94.734,121.037)
O3': (-9.312,98.254,125.653)
C2: (-9.300,90.054,118.208)
OP1: (-11.265,83.578,114.103)
OP2: (-8.939,84.456,114.706)
C4: (-7.224,89.159,117.646)
O5': (-10.979,85.709,115.394)
C3': (-12.206,88.377,115.412)
C1': (-11.399,88.860,117.583)
O4': (-11.785,87.494,117.538)
C5': (-12.338,85.849,115.845)
P: (-10.368,84.277,115.056)
O2: (-10.003,90.947,118.718)
C4': (-12.583,87.250,116.354)
C2': (-12.028,89.550,116.369)
O2': (-13.248,90.132,116.770)
N1: (-9.923,88.938,117.605)
N3: (-7.949,90.128,118.212)
N4: (-5.894,89.281,117.662)
C6: (-9.163,87.949,117.041)
C5: (-7.828,88.020,117.036)
O3': (-13.244,88.600,114.465)
OP1: (-11.265,83.578,114.103)
OP2: (-8.939,84.456,114.706)
C4: (-7.224,89.159,117.646)
O5': (-10.979,85.709,115.394)
C3': (-12.206,88.377,115.412)
C1': (-11.399,88.860,117.583)
O4': (-11.785,87.494,117.538)
C5': (-12.338,85.849,115.845)
P: (-10.368,84.277,115.056)
O2: (-10.003,90.947,118.718)
C4': (-12.583,87.250,116.354)
C2': (-12.028,89.550,116.369)
O2': (-13.248,90.132,116.770)
N1: (-9.923,88.938,117.605)
N3: (-7.949,90.128,118.212)
N4: (-5.894,89.281,117.662)
C6: (-9.163,87.949,117.041)
C5: (-7.828,88.020,117.036)
O3': (-13.244,88.600,114.465)
Image (generated by PyMOL):