Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PN4:C9:C10
Extra
PDB:
ATOM 1 O3' C A 8 -32.402 -13.923 13.641 1.00 55.22 O
ATOM 2 P U A 9 -33.827 -13.340 13.207 1.00 54.28 P
ATOM 3 OP1 U A 9 -33.585 -12.617 11.932 1.00 55.06 O
ATOM 4 OP2 U A 9 -34.484 -12.679 14.346 1.00 56.21 O
ATOM 5 O5' U A 9 -34.579 -14.693 12.824 1.00 56.30 O
ATOM 6 C5' U A 9 -35.355 -15.502 13.690 1.00 55.04 C
ATOM 7 C4' U A 9 -36.402 -16.234 12.852 1.00 55.91 C
ATOM 8 O4' U A 9 -37.684 -15.661 13.202 1.00 57.98 O
ATOM 9 C3' U A 9 -36.328 -16.120 11.323 1.00 55.63 C
ATOM 10 O3' U A 9 -36.798 -17.288 10.683 1.00 52.94 O
ATOM 11 C2' U A 9 -37.272 -14.983 10.963 1.00 56.61 C
ATOM 12 O2' U A 9 -37.988 -15.278 9.791 1.00 56.74 O
ATOM 13 C1' U A 9 -38.298 -15.050 12.086 1.00 58.26 C
ATOM 14 N1 U A 9 -38.916 -13.726 12.415 1.00 58.11 N
ATOM 15 C2 U A 9 -40.262 -13.549 12.094 1.00 59.50 C
ATOM 16 O2 U A 9 -40.953 -14.420 11.581 1.00 58.24 O
ATOM 17 N3 U A 9 -40.768 -12.301 12.410 1.00 59.84 N
ATOM 18 C4 U A 9 -40.057 -11.254 12.992 1.00 59.59 C
ATOM 19 O4 U A 9 -40.628 -10.197 13.216 1.00 59.99 O
ATOM 20 C5 U A 9 -38.667 -11.516 13.287 1.00 58.82 C
ATOM 21 C6 U A 9 -38.160 -12.718 12.990 1.00 58.43 C
ATOM 22 P A A 10 -35.794 -18.374 10.101 1.00 52.43 P
ATOM 23 OP1 A A 10 -36.559 -19.233 9.165 1.00 54.14 O
ATOM 24 OP2 A A 10 -35.062 -18.981 11.219 1.00 53.38 O
ATOM 25 O5' A A 10 -34.709 -17.548 9.281 1.00 51.53 O
TER
ATOM 1 O3' U B 9 -36.798 -17.288 10.683 1.00 52.94 O
ATOM 2 P A B 10 -35.794 -18.374 10.101 1.00 52.43 P
ATOM 3 OP1 A B 10 -36.559 -19.233 9.165 1.00 54.14 O
ATOM 4 OP2 A B 10 -35.062 -18.981 11.219 1.00 53.38 O
ATOM 5 O5' A B 10 -34.709 -17.548 9.281 1.00 51.53 O
ATOM 6 C5' A B 10 -34.977 -17.111 7.950 1.00 49.21 C
ATOM 7 C4' A B 10 -33.723 -16.444 7.413 1.00 47.43 C
ATOM 8 O4' A B 10 -33.298 -15.468 8.398 1.00 46.29 O
ATOM 9 C3' A B 10 -32.502 -17.347 7.216 1.00 45.13 C
ATOM 10 O3' A B 10 -32.575 -18.008 5.985 1.00 43.69 O
ATOM 11 C2' A B 10 -31.388 -16.313 7.293 1.00 45.09 C
ATOM 12 O2' A B 10 -31.285 -15.462 6.186 1.00 47.94 O
ATOM 13 C1' A B 10 -31.877 -15.409 8.415 1.00 45.65 C
ATOM 14 N9 A B 10 -31.352 -15.781 9.729 1.00 46.12 N
ATOM 15 C8 A B 10 -32.069 -16.274 10.773 1.00 45.03 C
ATOM 16 N7 A B 10 -31.328 -16.493 11.822 1.00 47.09 N
ATOM 17 C5 A B 10 -30.044 -16.113 11.442 1.00 45.23 C
ATOM 18 C6 A B 10 -28.794 -16.108 12.086 1.00 44.29 C
ATOM 19 N6 A B 10 -28.612 -16.504 13.341 1.00 44.71 N
ATOM 20 N1 A B 10 -27.711 -15.671 11.403 1.00 45.35 N
ATOM 21 C2 A B 10 -27.852 -15.265 10.148 1.00 44.41 C
ATOM 22 N3 A B 10 -28.979 -15.239 9.457 1.00 45.64 N
ATOM 23 C4 A B 10 -30.042 -15.680 10.149 1.00 45.09 C
ATOM 24 P C B 11 -32.021 -19.484 5.667 1.00 43.55 P
ATOM 25 OP1 C B 11 -32.266 -19.772 4.240 1.00 43.42 O
ATOM 26 OP2 C B 11 -32.332 -20.472 6.708 1.00 42.29 O
ATOM 27 O5' C B 11 -30.443 -19.294 5.823 1.00 47.30 O
TER
ATOM 2 P U A 9 -33.827 -13.340 13.207 1.00 54.28 P
ATOM 3 OP1 U A 9 -33.585 -12.617 11.932 1.00 55.06 O
ATOM 4 OP2 U A 9 -34.484 -12.679 14.346 1.00 56.21 O
ATOM 5 O5' U A 9 -34.579 -14.693 12.824 1.00 56.30 O
ATOM 6 C5' U A 9 -35.355 -15.502 13.690 1.00 55.04 C
ATOM 7 C4' U A 9 -36.402 -16.234 12.852 1.00 55.91 C
ATOM 8 O4' U A 9 -37.684 -15.661 13.202 1.00 57.98 O
ATOM 9 C3' U A 9 -36.328 -16.120 11.323 1.00 55.63 C
ATOM 10 O3' U A 9 -36.798 -17.288 10.683 1.00 52.94 O
ATOM 11 C2' U A 9 -37.272 -14.983 10.963 1.00 56.61 C
ATOM 12 O2' U A 9 -37.988 -15.278 9.791 1.00 56.74 O
ATOM 13 C1' U A 9 -38.298 -15.050 12.086 1.00 58.26 C
ATOM 14 N1 U A 9 -38.916 -13.726 12.415 1.00 58.11 N
ATOM 15 C2 U A 9 -40.262 -13.549 12.094 1.00 59.50 C
ATOM 16 O2 U A 9 -40.953 -14.420 11.581 1.00 58.24 O
ATOM 17 N3 U A 9 -40.768 -12.301 12.410 1.00 59.84 N
ATOM 18 C4 U A 9 -40.057 -11.254 12.992 1.00 59.59 C
ATOM 19 O4 U A 9 -40.628 -10.197 13.216 1.00 59.99 O
ATOM 20 C5 U A 9 -38.667 -11.516 13.287 1.00 58.82 C
ATOM 21 C6 U A 9 -38.160 -12.718 12.990 1.00 58.43 C
ATOM 22 P A A 10 -35.794 -18.374 10.101 1.00 52.43 P
ATOM 23 OP1 A A 10 -36.559 -19.233 9.165 1.00 54.14 O
ATOM 24 OP2 A A 10 -35.062 -18.981 11.219 1.00 53.38 O
ATOM 25 O5' A A 10 -34.709 -17.548 9.281 1.00 51.53 O
TER
ATOM 1 O3' U B 9 -36.798 -17.288 10.683 1.00 52.94 O
ATOM 2 P A B 10 -35.794 -18.374 10.101 1.00 52.43 P
ATOM 3 OP1 A B 10 -36.559 -19.233 9.165 1.00 54.14 O
ATOM 4 OP2 A B 10 -35.062 -18.981 11.219 1.00 53.38 O
ATOM 5 O5' A B 10 -34.709 -17.548 9.281 1.00 51.53 O
ATOM 6 C5' A B 10 -34.977 -17.111 7.950 1.00 49.21 C
ATOM 7 C4' A B 10 -33.723 -16.444 7.413 1.00 47.43 C
ATOM 8 O4' A B 10 -33.298 -15.468 8.398 1.00 46.29 O
ATOM 9 C3' A B 10 -32.502 -17.347 7.216 1.00 45.13 C
ATOM 10 O3' A B 10 -32.575 -18.008 5.985 1.00 43.69 O
ATOM 11 C2' A B 10 -31.388 -16.313 7.293 1.00 45.09 C
ATOM 12 O2' A B 10 -31.285 -15.462 6.186 1.00 47.94 O
ATOM 13 C1' A B 10 -31.877 -15.409 8.415 1.00 45.65 C
ATOM 14 N9 A B 10 -31.352 -15.781 9.729 1.00 46.12 N
ATOM 15 C8 A B 10 -32.069 -16.274 10.773 1.00 45.03 C
ATOM 16 N7 A B 10 -31.328 -16.493 11.822 1.00 47.09 N
ATOM 17 C5 A B 10 -30.044 -16.113 11.442 1.00 45.23 C
ATOM 18 C6 A B 10 -28.794 -16.108 12.086 1.00 44.29 C
ATOM 19 N6 A B 10 -28.612 -16.504 13.341 1.00 44.71 N
ATOM 20 N1 A B 10 -27.711 -15.671 11.403 1.00 45.35 N
ATOM 21 C2 A B 10 -27.852 -15.265 10.148 1.00 44.41 C
ATOM 22 N3 A B 10 -28.979 -15.239 9.457 1.00 45.64 N
ATOM 23 C4 A B 10 -30.042 -15.680 10.149 1.00 45.09 C
ATOM 24 P C B 11 -32.021 -19.484 5.667 1.00 43.55 P
ATOM 25 OP1 C B 11 -32.266 -19.772 4.240 1.00 43.42 O
ATOM 26 OP2 C B 11 -32.332 -20.472 6.708 1.00 42.29 O
ATOM 27 O5' C B 11 -30.443 -19.294 5.823 1.00 47.30 O
TER
Atoms:
C4: (-40.057,-11.254,12.992)
N3: (-40.768,-12.301,12.410)
OP1: (-33.585,-12.617,11.932)
OP2: (-34.484,-12.679,14.346)
C2: (-40.262,-13.549,12.094)
C1': (-38.298,-15.050,12.086)
C3': (-36.328,-16.120,11.323)
O5': (-34.579,-14.693,12.824)
O4': (-37.684,-15.661,13.202)
C5': (-35.355,-15.502,13.690)
P: (-33.827,-13.340,13.207)
C4': (-36.402,-16.234,12.852)
C2': (-37.272,-14.983,10.963)
O2': (-37.988,-15.278,9.791)
N1: (-38.916,-13.726,12.415)
O4: (-40.628,-10.197,13.216)
O2: (-40.953,-14.420,11.581)
C6: (-38.160,-12.718,12.990)
C5: (-38.667,-11.516,13.287)
O3': (-36.798,-17.288,10.683)
N3: (-40.768,-12.301,12.410)
OP1: (-33.585,-12.617,11.932)
OP2: (-34.484,-12.679,14.346)
C2: (-40.262,-13.549,12.094)
C1': (-38.298,-15.050,12.086)
C3': (-36.328,-16.120,11.323)
O5': (-34.579,-14.693,12.824)
O4': (-37.684,-15.661,13.202)
C5': (-35.355,-15.502,13.690)
P: (-33.827,-13.340,13.207)
C4': (-36.402,-16.234,12.852)
C2': (-37.272,-14.983,10.963)
O2': (-37.988,-15.278,9.791)
N1: (-38.916,-13.726,12.415)
O4: (-40.628,-10.197,13.216)
O2: (-40.953,-14.420,11.581)
C6: (-38.160,-12.718,12.990)
C5: (-38.667,-11.516,13.287)
O3': (-36.798,-17.288,10.683)
OP1: (-36.559,-19.233,9.165)
OP2: (-35.062,-18.981,11.219)
C3': (-32.502,-17.347,7.216)
C1': (-31.877,-15.409,8.415)
C5': (-34.977,-17.111,7.950)
O4': (-33.298,-15.468,8.398)
C8: (-32.069,-16.274,10.773)
O2': (-31.285,-15.462,6.186)
C6: (-28.794,-16.108,12.086)
C5: (-30.044,-16.113,11.442)
C4: (-30.042,-15.680,10.149)
P: (-35.794,-18.374,10.101)
C4': (-33.723,-16.444,7.413)
C2': (-31.388,-16.313,7.293)
C2: (-27.852,-15.265,10.148)
N1: (-27.711,-15.671,11.403)
N3: (-28.979,-15.239,9.457)
N6: (-28.612,-16.504,13.341)
N7: (-31.328,-16.493,11.822)
N9: (-31.352,-15.781,9.729)
O5': (-34.709,-17.548,9.281)
O3': (-32.575,-18.008,5.985)
OP2: (-35.062,-18.981,11.219)
C3': (-32.502,-17.347,7.216)
C1': (-31.877,-15.409,8.415)
C5': (-34.977,-17.111,7.950)
O4': (-33.298,-15.468,8.398)
C8: (-32.069,-16.274,10.773)
O2': (-31.285,-15.462,6.186)
C6: (-28.794,-16.108,12.086)
C5: (-30.044,-16.113,11.442)
C4: (-30.042,-15.680,10.149)
P: (-35.794,-18.374,10.101)
C4': (-33.723,-16.444,7.413)
C2': (-31.388,-16.313,7.293)
C2: (-27.852,-15.265,10.148)
N1: (-27.711,-15.671,11.403)
N3: (-28.979,-15.239,9.457)
N6: (-28.612,-16.504,13.341)
N7: (-31.328,-16.493,11.822)
N9: (-31.352,-15.781,9.729)
O5': (-34.709,-17.548,9.281)
O3': (-32.575,-18.008,5.985)
Image (generated by PyMOL):