ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B4C:B44:B45

Extra

PDB:
ATOM 1 O3' G A 43 42.057 1.604 15.116 1.00 64.70 O
ATOM 2 P U A 44 41.478 1.144 13.692 1.00 64.52 P
ATOM 3 OP1 U A 44 40.650 -0.070 13.909 1.00 65.36 O
ATOM 4 OP2 U A 44 42.601 1.091 12.729 1.00 65.07 O
ATOM 5 O5' U A 44 40.512 2.341 13.280 1.00 63.24 O
ATOM 6 C5' U A 44 39.224 2.082 12.737 1.00 60.77 C
ATOM 7 C4' U A 44 38.186 2.969 13.385 1.00 59.06 C
ATOM 8 O4' U A 44 38.186 2.760 14.808 1.00 57.90 O
ATOM 9 C3' U A 44 38.406 4.468 13.274 1.00 58.69 C
ATOM 10 O3' U A 44 37.863 5.048 12.081 1.00 59.57 O
ATOM 11 C2' U A 44 37.597 5.031 14.448 1.00 57.60 C
ATOM 12 O2' U A 44 36.273 5.303 14.086 1.00 58.48 O
ATOM 13 C1' U A 44 37.523 3.848 15.402 1.00 56.92 C
ATOM 14 N1 U A 44 37.974 4.036 16.784 1.00 55.84 N
ATOM 15 C2 U A 44 37.013 4.425 17.713 1.00 54.18 C
ATOM 16 O2 U A 44 35.856 4.698 17.410 1.00 51.85 O
ATOM 17 N3 U A 44 37.456 4.477 19.007 1.00 54.44 N
ATOM 18 C4 U A 44 38.731 4.202 19.460 1.00 57.16 C
ATOM 19 O4 U A 44 38.970 4.264 20.669 1.00 59.64 O
ATOM 20 C5 U A 44 39.671 3.852 18.434 1.00 57.51 C
ATOM 21 C6 U A 44 39.272 3.792 17.162 1.00 56.26 C
ATOM 22 P G A 45 36.888 4.205 11.102 1.00 59.68 P
ATOM 23 OP1 G A 45 35.546 4.029 11.706 1.00 57.93 O
ATOM 24 OP2 G A 45 37.630 3.024 10.604 1.00 60.55 O
ATOM 25 O5' G A 45 36.700 5.198 9.876 1.00 59.98 O
TER

ATOM 1 O3' U B 44 37.863 5.048 12.081 1.00 59.57 O
ATOM 2 P G B 45 36.888 4.205 11.102 1.00 59.68 P
ATOM 3 OP1 G B 45 35.546 4.029 11.706 1.00 57.93 O
ATOM 4 OP2 G B 45 37.630 3.024 10.604 1.00 60.55 O
ATOM 5 O5' G B 45 36.700 5.198 9.876 1.00 59.98 O
ATOM 6 C5' G B 45 36.579 6.597 10.108 1.00 59.80 C
ATOM 7 C4' G B 45 37.775 7.333 9.548 1.00 59.21 C
ATOM 8 O4' G B 45 38.996 6.864 10.164 1.00 58.51 O
ATOM 9 C3' G B 45 38.049 7.104 8.081 1.00 59.71 C
ATOM 10 O3' G B 45 37.153 7.862 7.295 1.00 61.20 O
ATOM 11 C2' G B 45 39.490 7.561 7.948 1.00 58.88 C
ATOM 12 O2' G B 45 39.609 8.964 7.873 1.00 58.60 O
ATOM 13 C1' G B 45 40.075 7.063 9.268 1.00 59.48 C
ATOM 14 N9 G B 45 40.826 5.819 9.149 1.00 61.09 N
ATOM 15 C8 G B 45 40.590 4.638 9.809 1.00 62.41 C
ATOM 16 N7 G B 45 41.453 3.704 9.511 1.00 63.74 N
ATOM 17 C5 G B 45 42.304 4.304 8.594 1.00 63.59 C
ATOM 18 C6 G B 45 43.429 3.782 7.911 1.00 64.84 C
ATOM 19 O6 G B 45 43.909 2.644 7.975 1.00 65.43 O
ATOM 20 N1 G B 45 44.003 4.731 7.075 1.00 65.01 N
ATOM 21 C2 G B 45 43.546 6.015 6.910 1.00 64.51 C
ATOM 22 N2 G B 45 44.236 6.785 6.052 1.00 65.93 N
ATOM 23 N3 G B 45 42.494 6.511 7.536 1.00 63.25 N
ATOM 24 C4 G B 45 41.928 5.608 8.358 1.00 62.18 C
ATOM 25 P C B 46 36.341 7.132 6.128 1.00 62.07 P
ATOM 26 OP1 C B 46 35.387 8.120 5.559 1.00 61.69 O
ATOM 27 OP2 C B 46 35.829 5.827 6.647 1.00 60.87 O
ATOM 28 O5' C B 46 37.491 6.835 5.070 1.00 62.81 O
TER

Atoms:
C4: (38.731,4.202,19.460)
N3: (37.456,4.477,19.007)
OP1: (40.650,-0.070,13.909)
OP2: (42.601,1.091,12.729)
C2: (37.013,4.425,17.713)
C1': (37.523,3.848,15.402)
C3': (38.406,4.468,13.274)
O5': (40.512,2.341,13.280)
O4': (38.186,2.760,14.808)
C5': (39.224,2.082,12.737)
P: (41.478,1.144,13.692)
C4': (38.186,2.969,13.385)
C2': (37.597,5.031,14.448)
O2': (36.273,5.303,14.086)
N1: (37.974,4.036,16.784)
O4: (38.970,4.264,20.669)
O2: (35.856,4.698,17.410)
C6: (39.272,3.792,17.162)
C5: (39.671,3.852,18.434)
O3': (37.863,5.048,12.081)
OP1: (35.546,4.029,11.706)
OP2: (37.630,3.024,10.604)
C3': (38.049,7.104,8.081)
C1': (40.075,7.063,9.268)
C5': (36.579,6.597,10.108)
O6: (43.909,2.644,7.975)
O4': (38.996,6.864,10.164)
C8: (40.590,4.638,9.809)
C2: (43.546,6.015,6.910)
C6: (43.429,3.782,7.911)
C5: (42.304,4.304,8.594)
C4: (41.928,5.608,8.358)
P: (36.888,4.205,11.102)
C4': (37.775,7.333,9.548)
C2': (39.490,7.561,7.948)
O2': (39.609,8.964,7.873)
N1: (44.003,4.731,7.075)
N2: (44.236,6.785,6.052)
N3: (42.494,6.511,7.536)
N7: (41.453,3.704,9.511)
N9: (40.826,5.819,9.149)
O5': (36.700,5.198,9.876)
O3': (37.153,7.862,7.295)
Image (generated by PyMOL):
PyMOL image
show in jmol