Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0442:0443
Extra
PDB:
ATOM 1 O3' A A 441 38.709 136.156 59.738 1.00 32.53 O
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' U B 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 2 P A B 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 3 OP1 A B 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 4 OP2 A B 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 5 O5' A B 443 42.466 130.107 60.005 1.00 29.67 O
ATOM 6 C5' A B 443 41.692 128.998 60.479 1.00 28.52 C
ATOM 7 C4' A B 443 40.742 128.543 59.404 1.00 28.55 C
ATOM 8 O4' A B 443 39.797 129.605 59.128 1.00 31.03 O
ATOM 9 C3' A B 443 41.391 128.269 58.063 1.00 29.08 C
ATOM 10 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 11 C2' A B 443 40.233 128.459 57.098 1.00 30.78 C
ATOM 12 O2' A B 443 39.370 127.344 57.094 1.00 34.54 O
ATOM 13 C1' A B 443 39.497 129.630 57.744 1.00 32.10 C
ATOM 14 N9 A B 443 39.846 130.954 57.222 1.00 34.95 N
ATOM 15 C8 A B 443 40.494 131.965 57.889 1.00 36.47 C
ATOM 16 N7 A B 443 40.636 133.059 57.183 1.00 38.22 N
ATOM 17 C5 A B 443 40.052 132.749 55.965 1.00 36.95 C
ATOM 18 C6 A B 443 39.881 133.493 54.789 1.00 36.50 C
ATOM 19 N6 A B 443 40.278 134.757 54.656 1.00 34.65 N
ATOM 20 N1 A B 443 39.273 132.889 53.744 1.00 36.46 N
ATOM 21 C2 A B 443 38.860 131.623 53.890 1.00 36.90 C
ATOM 22 N3 A B 443 38.955 130.822 54.951 1.00 37.26 N
ATOM 23 C4 A B 443 39.570 131.452 55.968 1.00 36.79 C
ATOM 24 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 25 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 26 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 27 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
TER
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' U B 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 2 P A B 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 3 OP1 A B 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 4 OP2 A B 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 5 O5' A B 443 42.466 130.107 60.005 1.00 29.67 O
ATOM 6 C5' A B 443 41.692 128.998 60.479 1.00 28.52 C
ATOM 7 C4' A B 443 40.742 128.543 59.404 1.00 28.55 C
ATOM 8 O4' A B 443 39.797 129.605 59.128 1.00 31.03 O
ATOM 9 C3' A B 443 41.391 128.269 58.063 1.00 29.08 C
ATOM 10 O3' A B 443 41.944 126.965 58.012 1.00 26.48 O
ATOM 11 C2' A B 443 40.233 128.459 57.098 1.00 30.78 C
ATOM 12 O2' A B 443 39.370 127.344 57.094 1.00 34.54 O
ATOM 13 C1' A B 443 39.497 129.630 57.744 1.00 32.10 C
ATOM 14 N9 A B 443 39.846 130.954 57.222 1.00 34.95 N
ATOM 15 C8 A B 443 40.494 131.965 57.889 1.00 36.47 C
ATOM 16 N7 A B 443 40.636 133.059 57.183 1.00 38.22 N
ATOM 17 C5 A B 443 40.052 132.749 55.965 1.00 36.95 C
ATOM 18 C6 A B 443 39.881 133.493 54.789 1.00 36.50 C
ATOM 19 N6 A B 443 40.278 134.757 54.656 1.00 34.65 N
ATOM 20 N1 A B 443 39.273 132.889 53.744 1.00 36.46 N
ATOM 21 C2 A B 443 38.860 131.623 53.890 1.00 36.90 C
ATOM 22 N3 A B 443 38.955 130.822 54.951 1.00 37.26 N
ATOM 23 C4 A B 443 39.570 131.452 55.968 1.00 36.79 C
ATOM 24 P G B 444 43.384 126.754 57.353 1.00 28.60 P
ATOM 25 OP1 G B 444 43.685 125.304 57.278 1.00 27.74 O
ATOM 26 OP2 G B 444 44.321 127.663 58.056 1.00 29.66 O
ATOM 27 O5' G B 444 43.192 127.292 55.868 1.00 28.76 O
TER
Atoms:
C4: (39.338,134.985,67.231)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
OP1: (44.498,129.780,61.437)
OP2: (44.092,131.967,60.153)
C3': (41.391,128.269,58.063)
C1': (39.497,129.630,57.744)
C5': (41.692,128.998,60.479)
O4': (39.797,129.605,59.128)
C8: (40.494,131.965,57.889)
O2': (39.370,127.344,57.094)
C6: (39.881,133.493,54.789)
C5: (40.052,132.749,55.965)
C4: (39.570,131.452,55.968)
P: (43.558,130.812,60.923)
C4': (40.742,128.543,59.404)
C2': (40.233,128.459,57.098)
C2: (38.860,131.623,53.890)
N1: (39.273,132.889,53.744)
N3: (38.955,130.822,54.951)
N6: (40.278,134.757,54.656)
N7: (40.636,133.059,57.183)
N9: (39.846,130.954,57.222)
O5': (42.466,130.107,60.005)
O3': (41.944,126.965,58.012)
OP2: (44.092,131.967,60.153)
C3': (41.391,128.269,58.063)
C1': (39.497,129.630,57.744)
C5': (41.692,128.998,60.479)
O4': (39.797,129.605,59.128)
C8: (40.494,131.965,57.889)
O2': (39.370,127.344,57.094)
C6: (39.881,133.493,54.789)
C5: (40.052,132.749,55.965)
C4: (39.570,131.452,55.968)
P: (43.558,130.812,60.923)
C4': (40.742,128.543,59.404)
C2': (40.233,128.459,57.098)
C2: (38.860,131.623,53.890)
N1: (39.273,132.889,53.744)
N3: (38.955,130.822,54.951)
N6: (40.278,134.757,54.656)
N7: (40.636,133.059,57.183)
N9: (39.846,130.954,57.222)
O5': (42.466,130.107,60.005)
O3': (41.944,126.965,58.012)
Image (generated by PyMOL):