Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01234:01240
Extra
PDB:
ATOM 1 O3' A A1233 4.980 79.305 68.105 1.00 42.22 O
ATOM 2 P C A1234 5.310 79.444 66.542 1.00 44.35 P
ATOM 3 OP1 C A1234 4.701 78.263 65.873 1.00 44.91 O
ATOM 4 OP2 C A1234 6.765 79.698 66.385 1.00 43.95 O
ATOM 5 O5' C A1234 4.512 80.754 66.106 1.00 41.97 O
ATOM 6 C5' C A1234 3.081 80.771 66.123 1.00 42.39 C
ATOM 7 C4' C A1234 2.554 82.152 65.807 1.00 44.95 C
ATOM 8 O4' C A1234 2.877 83.080 66.877 1.00 46.07 O
ATOM 9 C3' C A1234 3.108 82.834 64.573 1.00 45.34 C
ATOM 10 O3' C A1234 2.533 82.338 63.376 1.00 46.88 O
ATOM 11 C2' C A1234 2.734 84.284 64.834 1.00 46.00 C
ATOM 12 O2' C A1234 1.377 84.559 64.567 1.00 47.45 O
ATOM 13 C1' C A1234 2.992 84.390 66.340 1.00 45.99 C
ATOM 14 N1 C A1234 4.346 84.905 66.608 1.00 46.95 N
ATOM 15 C2 C A1234 4.545 86.292 66.638 1.00 48.70 C
ATOM 16 O2 C A1234 3.562 87.048 66.521 1.00 50.61 O
ATOM 17 N3 C A1234 5.796 86.776 66.799 1.00 48.48 N
ATOM 18 C4 C A1234 6.821 85.937 66.946 1.00 48.48 C
ATOM 19 N4 C A1234 8.037 86.461 67.079 1.00 49.49 N
ATOM 20 C5 C A1234 6.644 84.524 66.959 1.00 47.87 C
ATOM 21 C6 C A1234 5.403 84.055 66.791 1.00 47.14 C
ATOM 22 P U A1235 3.468 82.091 62.096 1.00 50.07 P
ATOM 23 OP1 U A1235 2.632 81.599 60.970 1.00 49.38 O
ATOM 24 OP2 U A1235 4.630 81.284 62.548 1.00 47.67 O
ATOM 25 O5' U A1235 3.974 83.557 61.734 1.00 49.19 O
TER
ATOM 1 O3' A B1239 7.996 97.951 66.272 1.00 84.75 O
ATOM 2 P C B1240 7.379 97.751 67.746 1.00 84.65 P
ATOM 3 OP1 C B1240 7.448 99.061 68.443 1.00 84.66 O
ATOM 4 OP2 C B1240 7.984 96.549 68.378 1.00 84.29 O
ATOM 5 O5' C B1240 5.843 97.439 67.486 1.00 82.06 O
ATOM 6 C5' C B1240 5.044 96.859 68.517 1.00 78.30 C
ATOM 7 C4' C B1240 3.695 96.474 67.979 1.00 75.58 C
ATOM 8 O4' C B1240 3.844 95.577 66.848 1.00 74.77 O
ATOM 9 C3' C B1240 2.868 95.683 68.967 1.00 74.52 C
ATOM 10 O3' C B1240 2.226 96.546 69.881 1.00 73.31 O
ATOM 11 C2' C B1240 1.909 94.923 68.066 1.00 74.28 C
ATOM 12 O2' C B1240 0.823 95.712 67.620 1.00 74.86 O
ATOM 13 C1' C B1240 2.825 94.588 66.886 1.00 73.40 C
ATOM 14 N1 C B1240 3.467 93.262 66.988 1.00 71.51 N
ATOM 15 C2 C B1240 2.667 92.107 66.905 1.00 70.82 C
ATOM 16 O2 C B1240 1.434 92.228 66.787 1.00 70.41 O
ATOM 17 N3 C B1240 3.260 90.892 66.958 1.00 70.18 N
ATOM 18 C4 C B1240 4.585 90.800 67.097 1.00 69.70 C
ATOM 19 N4 C B1240 5.128 89.582 67.131 1.00 68.82 N
ATOM 20 C5 C B1240 5.414 91.954 67.205 1.00 69.31 C
ATOM 21 C6 C B1240 4.821 93.150 67.148 1.00 69.57 C
ATOM 22 P U B1241 2.248 96.189 71.438 1.00 73.17 P
ATOM 23 OP1 U B1241 1.351 97.160 72.110 1.00 74.67 O
ATOM 24 OP2 U B1241 3.662 96.064 71.880 1.00 72.05 O
ATOM 25 O5' U B1241 1.553 94.759 71.489 1.00 71.00 O
TER
ATOM 2 P C A1234 5.310 79.444 66.542 1.00 44.35 P
ATOM 3 OP1 C A1234 4.701 78.263 65.873 1.00 44.91 O
ATOM 4 OP2 C A1234 6.765 79.698 66.385 1.00 43.95 O
ATOM 5 O5' C A1234 4.512 80.754 66.106 1.00 41.97 O
ATOM 6 C5' C A1234 3.081 80.771 66.123 1.00 42.39 C
ATOM 7 C4' C A1234 2.554 82.152 65.807 1.00 44.95 C
ATOM 8 O4' C A1234 2.877 83.080 66.877 1.00 46.07 O
ATOM 9 C3' C A1234 3.108 82.834 64.573 1.00 45.34 C
ATOM 10 O3' C A1234 2.533 82.338 63.376 1.00 46.88 O
ATOM 11 C2' C A1234 2.734 84.284 64.834 1.00 46.00 C
ATOM 12 O2' C A1234 1.377 84.559 64.567 1.00 47.45 O
ATOM 13 C1' C A1234 2.992 84.390 66.340 1.00 45.99 C
ATOM 14 N1 C A1234 4.346 84.905 66.608 1.00 46.95 N
ATOM 15 C2 C A1234 4.545 86.292 66.638 1.00 48.70 C
ATOM 16 O2 C A1234 3.562 87.048 66.521 1.00 50.61 O
ATOM 17 N3 C A1234 5.796 86.776 66.799 1.00 48.48 N
ATOM 18 C4 C A1234 6.821 85.937 66.946 1.00 48.48 C
ATOM 19 N4 C A1234 8.037 86.461 67.079 1.00 49.49 N
ATOM 20 C5 C A1234 6.644 84.524 66.959 1.00 47.87 C
ATOM 21 C6 C A1234 5.403 84.055 66.791 1.00 47.14 C
ATOM 22 P U A1235 3.468 82.091 62.096 1.00 50.07 P
ATOM 23 OP1 U A1235 2.632 81.599 60.970 1.00 49.38 O
ATOM 24 OP2 U A1235 4.630 81.284 62.548 1.00 47.67 O
ATOM 25 O5' U A1235 3.974 83.557 61.734 1.00 49.19 O
TER
ATOM 1 O3' A B1239 7.996 97.951 66.272 1.00 84.75 O
ATOM 2 P C B1240 7.379 97.751 67.746 1.00 84.65 P
ATOM 3 OP1 C B1240 7.448 99.061 68.443 1.00 84.66 O
ATOM 4 OP2 C B1240 7.984 96.549 68.378 1.00 84.29 O
ATOM 5 O5' C B1240 5.843 97.439 67.486 1.00 82.06 O
ATOM 6 C5' C B1240 5.044 96.859 68.517 1.00 78.30 C
ATOM 7 C4' C B1240 3.695 96.474 67.979 1.00 75.58 C
ATOM 8 O4' C B1240 3.844 95.577 66.848 1.00 74.77 O
ATOM 9 C3' C B1240 2.868 95.683 68.967 1.00 74.52 C
ATOM 10 O3' C B1240 2.226 96.546 69.881 1.00 73.31 O
ATOM 11 C2' C B1240 1.909 94.923 68.066 1.00 74.28 C
ATOM 12 O2' C B1240 0.823 95.712 67.620 1.00 74.86 O
ATOM 13 C1' C B1240 2.825 94.588 66.886 1.00 73.40 C
ATOM 14 N1 C B1240 3.467 93.262 66.988 1.00 71.51 N
ATOM 15 C2 C B1240 2.667 92.107 66.905 1.00 70.82 C
ATOM 16 O2 C B1240 1.434 92.228 66.787 1.00 70.41 O
ATOM 17 N3 C B1240 3.260 90.892 66.958 1.00 70.18 N
ATOM 18 C4 C B1240 4.585 90.800 67.097 1.00 69.70 C
ATOM 19 N4 C B1240 5.128 89.582 67.131 1.00 68.82 N
ATOM 20 C5 C B1240 5.414 91.954 67.205 1.00 69.31 C
ATOM 21 C6 C B1240 4.821 93.150 67.148 1.00 69.57 C
ATOM 22 P U B1241 2.248 96.189 71.438 1.00 73.17 P
ATOM 23 OP1 U B1241 1.351 97.160 72.110 1.00 74.67 O
ATOM 24 OP2 U B1241 3.662 96.064 71.880 1.00 72.05 O
ATOM 25 O5' U B1241 1.553 94.759 71.489 1.00 71.00 O
TER
Atoms:
C2: (4.545,86.292,66.638)
OP1: (4.701,78.263,65.873)
OP2: (6.765,79.698,66.385)
C4: (6.821,85.937,66.946)
O5': (4.512,80.754,66.106)
C3': (3.108,82.834,64.573)
C1': (2.992,84.390,66.340)
O4': (2.877,83.080,66.877)
C5': (3.081,80.771,66.123)
P: (5.310,79.444,66.542)
O2: (3.562,87.048,66.521)
C4': (2.554,82.152,65.807)
C2': (2.734,84.284,64.834)
O2': (1.377,84.559,64.567)
N1: (4.346,84.905,66.608)
N3: (5.796,86.776,66.799)
N4: (8.037,86.461,67.079)
C6: (5.403,84.055,66.791)
C5: (6.644,84.524,66.959)
O3': (2.533,82.338,63.376)
OP1: (4.701,78.263,65.873)
OP2: (6.765,79.698,66.385)
C4: (6.821,85.937,66.946)
O5': (4.512,80.754,66.106)
C3': (3.108,82.834,64.573)
C1': (2.992,84.390,66.340)
O4': (2.877,83.080,66.877)
C5': (3.081,80.771,66.123)
P: (5.310,79.444,66.542)
O2: (3.562,87.048,66.521)
C4': (2.554,82.152,65.807)
C2': (2.734,84.284,64.834)
O2': (1.377,84.559,64.567)
N1: (4.346,84.905,66.608)
N3: (5.796,86.776,66.799)
N4: (8.037,86.461,67.079)
C6: (5.403,84.055,66.791)
C5: (6.644,84.524,66.959)
O3': (2.533,82.338,63.376)
C2: (2.667,92.107,66.905)
OP1: (7.448,99.061,68.443)
OP2: (7.984,96.549,68.378)
C4: (4.585,90.800,67.097)
O5': (5.843,97.439,67.486)
C3': (2.868,95.683,68.967)
C1': (2.825,94.588,66.886)
O4': (3.844,95.577,66.848)
C5': (5.044,96.859,68.517)
P: (7.379,97.751,67.746)
O2: (1.434,92.228,66.787)
C4': (3.695,96.474,67.979)
C2': (1.909,94.923,68.066)
O2': (0.823,95.712,67.620)
N1: (3.467,93.262,66.988)
N3: (3.260,90.892,66.958)
N4: (5.128,89.582,67.131)
C6: (4.821,93.150,67.148)
C5: (5.414,91.954,67.205)
O3': (2.226,96.546,69.881)
OP1: (7.448,99.061,68.443)
OP2: (7.984,96.549,68.378)
C4: (4.585,90.800,67.097)
O5': (5.843,97.439,67.486)
C3': (2.868,95.683,68.967)
C1': (2.825,94.588,66.886)
O4': (3.844,95.577,66.848)
C5': (5.044,96.859,68.517)
P: (7.379,97.751,67.746)
O2: (1.434,92.228,66.787)
C4': (3.695,96.474,67.979)
C2': (1.909,94.923,68.066)
O2': (0.823,95.712,67.620)
N1: (3.467,93.262,66.988)
N3: (3.260,90.892,66.958)
N4: (5.128,89.582,67.131)
C6: (4.821,93.150,67.148)
C5: (5.414,91.954,67.205)
O3': (2.226,96.546,69.881)
Image (generated by PyMOL):