Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01317:01318
Extra
PDB:
ATOM 1 O3' A A1316 43.936 122.194 80.020 1.00 30.62 O
ATOM 2 P A A1317 45.029 123.364 79.940 1.00 28.33 P
ATOM 3 OP1 A A1317 45.376 123.674 81.333 1.00 29.12 O
ATOM 4 OP2 A A1317 44.534 124.449 79.059 1.00 28.52 O
ATOM 5 O5' A A1317 46.269 122.655 79.246 1.00 25.12 O
ATOM 6 C5' A A1317 46.810 121.460 79.808 1.00 25.65 C
ATOM 7 C4' A A1317 47.498 120.653 78.749 1.00 25.81 C
ATOM 8 O4' A A1317 46.566 120.367 77.684 1.00 26.69 O
ATOM 9 C3' A A1317 48.616 121.374 78.022 1.00 25.40 C
ATOM 10 O3' A A1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 11 C2' A A1317 48.751 120.555 76.740 1.00 24.69 C
ATOM 12 O2' A A1317 49.555 119.413 76.942 1.00 25.19 O
ATOM 13 C1' A A1317 47.304 120.097 76.501 1.00 24.88 C
ATOM 14 N9 A A1317 46.594 120.673 75.357 1.00 22.11 N
ATOM 15 C8 A A1317 45.505 121.513 75.384 1.00 23.03 C
ATOM 16 N7 A A1317 45.049 121.828 74.199 1.00 21.93 N
ATOM 17 C5 A A1317 45.896 121.157 73.329 1.00 22.48 C
ATOM 18 C6 A A1317 45.937 121.075 71.924 1.00 20.84 C
ATOM 19 N6 A A1317 45.057 121.665 71.123 1.00 18.93 N
ATOM 20 N1 A A1317 46.922 120.342 71.367 1.00 20.78 N
ATOM 21 C2 A A1317 47.792 119.723 72.174 1.00 21.73 C
ATOM 22 N3 A A1317 47.846 119.708 73.506 1.00 23.78 N
ATOM 23 C4 A A1317 46.861 120.454 74.029 1.00 21.69 C
ATOM 24 P U A1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 25 OP1 U A1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 26 OP2 U A1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 27 O5' U A1318 50.219 123.754 79.245 1.00 25.49 O
TER
ATOM 1 O3' A B1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 2 P U B1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U B1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U B1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U B1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U B1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U B1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U B1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U B1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U B1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U B1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U B1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U B1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U B1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U B1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U B1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U B1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U B1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U B1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U B1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
TER
ATOM 2 P A A1317 45.029 123.364 79.940 1.00 28.33 P
ATOM 3 OP1 A A1317 45.376 123.674 81.333 1.00 29.12 O
ATOM 4 OP2 A A1317 44.534 124.449 79.059 1.00 28.52 O
ATOM 5 O5' A A1317 46.269 122.655 79.246 1.00 25.12 O
ATOM 6 C5' A A1317 46.810 121.460 79.808 1.00 25.65 C
ATOM 7 C4' A A1317 47.498 120.653 78.749 1.00 25.81 C
ATOM 8 O4' A A1317 46.566 120.367 77.684 1.00 26.69 O
ATOM 9 C3' A A1317 48.616 121.374 78.022 1.00 25.40 C
ATOM 10 O3' A A1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 11 C2' A A1317 48.751 120.555 76.740 1.00 24.69 C
ATOM 12 O2' A A1317 49.555 119.413 76.942 1.00 25.19 O
ATOM 13 C1' A A1317 47.304 120.097 76.501 1.00 24.88 C
ATOM 14 N9 A A1317 46.594 120.673 75.357 1.00 22.11 N
ATOM 15 C8 A A1317 45.505 121.513 75.384 1.00 23.03 C
ATOM 16 N7 A A1317 45.049 121.828 74.199 1.00 21.93 N
ATOM 17 C5 A A1317 45.896 121.157 73.329 1.00 22.48 C
ATOM 18 C6 A A1317 45.937 121.075 71.924 1.00 20.84 C
ATOM 19 N6 A A1317 45.057 121.665 71.123 1.00 18.93 N
ATOM 20 N1 A A1317 46.922 120.342 71.367 1.00 20.78 N
ATOM 21 C2 A A1317 47.792 119.723 72.174 1.00 21.73 C
ATOM 22 N3 A A1317 47.846 119.708 73.506 1.00 23.78 N
ATOM 23 C4 A A1317 46.861 120.454 74.029 1.00 21.69 C
ATOM 24 P U A1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 25 OP1 U A1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 26 OP2 U A1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 27 O5' U A1318 50.219 123.754 79.245 1.00 25.49 O
TER
ATOM 1 O3' A B1317 49.788 121.287 78.818 1.00 25.31 O
ATOM 2 P U B1318 50.919 122.423 78.730 1.00 27.05 P
ATOM 3 OP1 U B1318 51.301 122.647 77.313 1.00 23.32 O
ATOM 4 OP2 U B1318 51.949 122.010 79.714 1.00 24.86 O
ATOM 5 O5' U B1318 50.219 123.754 79.245 1.00 25.49 O
ATOM 6 C5' U B1318 49.748 123.886 80.594 1.00 28.51 C
ATOM 7 C4' U B1318 50.440 125.046 81.272 1.00 29.46 C
ATOM 8 O4' U B1318 51.787 124.672 81.621 1.00 30.26 O
ATOM 9 C3' U B1318 50.650 126.277 80.409 1.00 29.45 C
ATOM 10 O3' U B1318 49.462 127.049 80.409 1.00 27.60 O
ATOM 11 C2' U B1318 51.789 127.005 81.128 1.00 32.77 C
ATOM 12 O2' U B1318 51.358 127.903 82.134 1.00 35.33 O
ATOM 13 C1' U B1318 52.550 125.845 81.785 1.00 29.46 C
ATOM 14 N1 U B1318 53.927 125.596 81.334 1.00 28.39 N
ATOM 15 C2 U B1318 54.913 126.459 81.793 1.00 28.09 C
ATOM 16 O2 U B1318 54.672 127.432 82.482 1.00 28.79 O
ATOM 17 N3 U B1318 56.188 126.140 81.411 1.00 25.56 N
ATOM 18 C4 U B1318 56.577 125.079 80.627 1.00 28.27 C
ATOM 19 O4 U B1318 57.777 124.886 80.428 1.00 30.23 O
ATOM 20 C5 U B1318 55.503 124.256 80.158 1.00 27.77 C
ATOM 21 C6 U B1318 54.245 124.537 80.515 1.00 27.34 C
ATOM 22 P C B1319 49.110 127.988 79.160 1.00 26.00 P
ATOM 23 OP1 C B1319 50.097 129.079 79.080 1.00 28.85 O
ATOM 24 OP2 C B1319 47.670 128.313 79.288 1.00 21.36 O
ATOM 25 O5' C B1319 49.357 127.071 77.882 1.00 26.82 O
TER
Atoms:
OP1: (45.376,123.674,81.333)
OP2: (44.534,124.449,79.059)
C3': (48.616,121.374,78.022)
C1': (47.304,120.097,76.501)
C5': (46.810,121.460,79.808)
O4': (46.566,120.367,77.684)
C8: (45.505,121.513,75.384)
O2': (49.555,119.413,76.942)
C6: (45.937,121.075,71.924)
C5: (45.896,121.157,73.329)
C4: (46.861,120.454,74.029)
P: (45.029,123.364,79.940)
C4': (47.498,120.653,78.749)
C2': (48.751,120.555,76.740)
C2: (47.792,119.723,72.174)
N1: (46.922,120.342,71.367)
N3: (47.846,119.708,73.506)
N6: (45.057,121.665,71.123)
N7: (45.049,121.828,74.199)
N9: (46.594,120.673,75.357)
O5': (46.269,122.655,79.246)
O3': (49.788,121.287,78.818)
OP2: (44.534,124.449,79.059)
C3': (48.616,121.374,78.022)
C1': (47.304,120.097,76.501)
C5': (46.810,121.460,79.808)
O4': (46.566,120.367,77.684)
C8: (45.505,121.513,75.384)
O2': (49.555,119.413,76.942)
C6: (45.937,121.075,71.924)
C5: (45.896,121.157,73.329)
C4: (46.861,120.454,74.029)
P: (45.029,123.364,79.940)
C4': (47.498,120.653,78.749)
C2': (48.751,120.555,76.740)
C2: (47.792,119.723,72.174)
N1: (46.922,120.342,71.367)
N3: (47.846,119.708,73.506)
N6: (45.057,121.665,71.123)
N7: (45.049,121.828,74.199)
N9: (46.594,120.673,75.357)
O5': (46.269,122.655,79.246)
O3': (49.788,121.287,78.818)
C4: (56.577,125.079,80.627)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
N3: (56.188,126.140,81.411)
OP1: (51.301,122.647,77.313)
OP2: (51.949,122.010,79.714)
C2: (54.913,126.459,81.793)
C1': (52.550,125.845,81.785)
C3': (50.650,126.277,80.409)
O5': (50.219,123.754,79.245)
O4': (51.787,124.672,81.621)
C5': (49.748,123.886,80.594)
P: (50.919,122.423,78.730)
C4': (50.440,125.046,81.272)
C2': (51.789,127.005,81.128)
O2': (51.358,127.903,82.134)
N1: (53.927,125.596,81.334)
O4: (57.777,124.886,80.428)
O2: (54.672,127.432,82.482)
C6: (54.245,124.537,80.515)
C5: (55.503,124.256,80.158)
O3': (49.462,127.049,80.409)
Image (generated by PyMOL):