Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01317:01318
Extra
PDB:
ATOM 1 O3' A A1316 44.217 122.462 80.400 1.00 38.56 O
ATOM 2 P A A1317 45.363 123.603 80.353 1.00 38.33 P
ATOM 3 OP1 A A1317 45.721 123.843 81.756 1.00 37.11 O
ATOM 4 OP2 A A1317 44.953 124.750 79.520 1.00 37.13 O
ATOM 5 O5' A A1317 46.586 122.877 79.635 1.00 35.65 O
ATOM 6 C5' A A1317 47.149 121.686 80.198 1.00 36.01 C
ATOM 7 C4' A A1317 47.828 120.871 79.131 1.00 37.01 C
ATOM 8 O4' A A1317 46.873 120.587 78.084 1.00 38.33 O
ATOM 9 C3' A A1317 48.964 121.554 78.384 1.00 35.55 C
ATOM 10 O3' A A1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 11 C2' A A1317 49.045 120.728 77.100 1.00 35.43 C
ATOM 12 O2' A A1317 49.847 119.581 77.276 1.00 35.38 O
ATOM 13 C1' A A1317 47.582 120.293 76.896 1.00 35.64 C
ATOM 14 N9 A A1317 46.871 120.887 75.763 1.00 33.74 N
ATOM 15 C8 A A1317 45.841 121.798 75.789 1.00 33.93 C
ATOM 16 N7 A A1317 45.399 122.131 74.599 1.00 33.09 N
ATOM 17 C5 A A1317 46.194 121.392 73.731 1.00 33.15 C
ATOM 18 C6 A A1317 46.234 121.302 72.331 1.00 31.17 C
ATOM 19 N6 A A1317 45.426 121.980 71.522 1.00 33.84 N
ATOM 20 N1 A A1317 47.144 120.483 71.780 1.00 30.61 N
ATOM 21 C2 A A1317 47.958 119.801 72.585 1.00 33.19 C
ATOM 22 N3 A A1317 48.023 119.798 73.913 1.00 34.44 N
ATOM 23 C4 A A1317 47.103 120.625 74.433 1.00 33.81 C
ATOM 24 P U A1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 25 OP1 U A1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 26 OP2 U A1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 27 O5' U A1318 50.532 123.888 79.569 1.00 35.49 O
TER
ATOM 1 O3' A B1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 2 P U B1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 3 OP1 U B1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 4 OP2 U B1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 5 O5' U B1318 50.532 123.888 79.569 1.00 35.49 O
ATOM 6 C5' U B1318 49.962 124.032 80.888 1.00 38.06 C
ATOM 7 C4' U B1318 50.630 125.174 81.626 1.00 39.93 C
ATOM 8 O4' U B1318 51.980 124.799 81.972 1.00 41.02 O
ATOM 9 C3' U B1318 50.849 126.439 80.815 1.00 40.11 C
ATOM 10 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 11 C2' U B1318 51.974 127.149 81.575 1.00 40.30 C
ATOM 12 O2' U B1318 51.526 127.961 82.640 1.00 43.86 O
ATOM 13 C1' U B1318 52.733 125.973 82.191 1.00 39.17 C
ATOM 14 N1 U B1318 54.128 125.759 81.775 1.00 37.83 N
ATOM 15 C2 U B1318 55.092 126.588 82.330 1.00 37.79 C
ATOM 16 O2 U B1318 54.828 127.493 83.106 1.00 39.36 O
ATOM 17 N3 U B1318 56.378 126.320 81.946 1.00 36.00 N
ATOM 18 C4 U B1318 56.794 125.341 81.089 1.00 35.61 C
ATOM 19 O4 U B1318 57.987 125.234 80.844 1.00 35.81 O
ATOM 20 C5 U B1318 55.748 124.532 80.547 1.00 36.74 C
ATOM 21 C6 U B1318 54.481 124.766 80.896 1.00 37.01 C
ATOM 22 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 23 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 24 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 25 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
TER
ATOM 2 P A A1317 45.363 123.603 80.353 1.00 38.33 P
ATOM 3 OP1 A A1317 45.721 123.843 81.756 1.00 37.11 O
ATOM 4 OP2 A A1317 44.953 124.750 79.520 1.00 37.13 O
ATOM 5 O5' A A1317 46.586 122.877 79.635 1.00 35.65 O
ATOM 6 C5' A A1317 47.149 121.686 80.198 1.00 36.01 C
ATOM 7 C4' A A1317 47.828 120.871 79.131 1.00 37.01 C
ATOM 8 O4' A A1317 46.873 120.587 78.084 1.00 38.33 O
ATOM 9 C3' A A1317 48.964 121.554 78.384 1.00 35.55 C
ATOM 10 O3' A A1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 11 C2' A A1317 49.045 120.728 77.100 1.00 35.43 C
ATOM 12 O2' A A1317 49.847 119.581 77.276 1.00 35.38 O
ATOM 13 C1' A A1317 47.582 120.293 76.896 1.00 35.64 C
ATOM 14 N9 A A1317 46.871 120.887 75.763 1.00 33.74 N
ATOM 15 C8 A A1317 45.841 121.798 75.789 1.00 33.93 C
ATOM 16 N7 A A1317 45.399 122.131 74.599 1.00 33.09 N
ATOM 17 C5 A A1317 46.194 121.392 73.731 1.00 33.15 C
ATOM 18 C6 A A1317 46.234 121.302 72.331 1.00 31.17 C
ATOM 19 N6 A A1317 45.426 121.980 71.522 1.00 33.84 N
ATOM 20 N1 A A1317 47.144 120.483 71.780 1.00 30.61 N
ATOM 21 C2 A A1317 47.958 119.801 72.585 1.00 33.19 C
ATOM 22 N3 A A1317 48.023 119.798 73.913 1.00 34.44 N
ATOM 23 C4 A A1317 47.103 120.625 74.433 1.00 33.81 C
ATOM 24 P U A1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 25 OP1 U A1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 26 OP2 U A1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 27 O5' U A1318 50.532 123.888 79.569 1.00 35.49 O
TER
ATOM 1 O3' A B1317 50.169 121.404 79.138 1.00 35.04 O
ATOM 2 P U B1318 51.291 122.559 79.131 1.00 35.33 P
ATOM 3 OP1 U B1318 51.832 122.753 77.763 1.00 34.31 O
ATOM 4 OP2 U B1318 52.201 122.186 80.226 1.00 35.92 O
ATOM 5 O5' U B1318 50.532 123.888 79.569 1.00 35.49 O
ATOM 6 C5' U B1318 49.962 124.032 80.888 1.00 38.06 C
ATOM 7 C4' U B1318 50.630 125.174 81.626 1.00 39.93 C
ATOM 8 O4' U B1318 51.980 124.799 81.972 1.00 41.02 O
ATOM 9 C3' U B1318 50.849 126.439 80.815 1.00 40.11 C
ATOM 10 O3' U B1318 49.653 127.210 80.789 1.00 38.86 O
ATOM 11 C2' U B1318 51.974 127.149 81.575 1.00 40.30 C
ATOM 12 O2' U B1318 51.526 127.961 82.640 1.00 43.86 O
ATOM 13 C1' U B1318 52.733 125.973 82.191 1.00 39.17 C
ATOM 14 N1 U B1318 54.128 125.759 81.775 1.00 37.83 N
ATOM 15 C2 U B1318 55.092 126.588 82.330 1.00 37.79 C
ATOM 16 O2 U B1318 54.828 127.493 83.106 1.00 39.36 O
ATOM 17 N3 U B1318 56.378 126.320 81.946 1.00 36.00 N
ATOM 18 C4 U B1318 56.794 125.341 81.089 1.00 35.61 C
ATOM 19 O4 U B1318 57.987 125.234 80.844 1.00 35.81 O
ATOM 20 C5 U B1318 55.748 124.532 80.547 1.00 36.74 C
ATOM 21 C6 U B1318 54.481 124.766 80.896 1.00 37.01 C
ATOM 22 P C B1319 49.354 128.170 79.545 1.00 37.77 P
ATOM 23 OP1 C B1319 50.338 129.268 79.580 1.00 41.27 O
ATOM 24 OP2 C B1319 47.917 128.489 79.558 1.00 38.47 O
ATOM 25 O5' C B1319 49.675 127.263 78.280 1.00 38.29 O
TER
Atoms:
OP1: (45.721,123.843,81.756)
OP2: (44.953,124.750,79.520)
C3': (48.964,121.554,78.384)
C1': (47.582,120.293,76.896)
C5': (47.149,121.686,80.198)
O4': (46.873,120.587,78.084)
C8: (45.841,121.798,75.789)
O2': (49.847,119.581,77.276)
C6: (46.234,121.302,72.331)
C5: (46.194,121.392,73.731)
C4: (47.103,120.625,74.433)
P: (45.363,123.603,80.353)
C4': (47.828,120.871,79.131)
C2': (49.045,120.728,77.100)
C2: (47.958,119.801,72.585)
N1: (47.144,120.483,71.780)
N3: (48.023,119.798,73.913)
N6: (45.426,121.980,71.522)
N7: (45.399,122.131,74.599)
N9: (46.871,120.887,75.763)
O5': (46.586,122.877,79.635)
O3': (50.169,121.404,79.138)
OP2: (44.953,124.750,79.520)
C3': (48.964,121.554,78.384)
C1': (47.582,120.293,76.896)
C5': (47.149,121.686,80.198)
O4': (46.873,120.587,78.084)
C8: (45.841,121.798,75.789)
O2': (49.847,119.581,77.276)
C6: (46.234,121.302,72.331)
C5: (46.194,121.392,73.731)
C4: (47.103,120.625,74.433)
P: (45.363,123.603,80.353)
C4': (47.828,120.871,79.131)
C2': (49.045,120.728,77.100)
C2: (47.958,119.801,72.585)
N1: (47.144,120.483,71.780)
N3: (48.023,119.798,73.913)
N6: (45.426,121.980,71.522)
N7: (45.399,122.131,74.599)
N9: (46.871,120.887,75.763)
O5': (46.586,122.877,79.635)
O3': (50.169,121.404,79.138)
C4: (56.794,125.341,81.089)
N3: (56.378,126.320,81.946)
OP1: (51.832,122.753,77.763)
OP2: (52.201,122.186,80.226)
C2: (55.092,126.588,82.330)
C1': (52.733,125.973,82.191)
C3': (50.849,126.439,80.815)
O5': (50.532,123.888,79.569)
O4': (51.980,124.799,81.972)
C5': (49.962,124.032,80.888)
P: (51.291,122.559,79.131)
C4': (50.630,125.174,81.626)
C2': (51.974,127.149,81.575)
O2': (51.526,127.961,82.640)
N1: (54.128,125.759,81.775)
O4: (57.987,125.234,80.844)
O2: (54.828,127.493,83.106)
C6: (54.481,124.766,80.896)
C5: (55.748,124.532,80.547)
O3': (49.653,127.210,80.789)
N3: (56.378,126.320,81.946)
OP1: (51.832,122.753,77.763)
OP2: (52.201,122.186,80.226)
C2: (55.092,126.588,82.330)
C1': (52.733,125.973,82.191)
C3': (50.849,126.439,80.815)
O5': (50.532,123.888,79.569)
O4': (51.980,124.799,81.972)
C5': (49.962,124.032,80.888)
P: (51.291,122.559,79.131)
C4': (50.630,125.174,81.626)
C2': (51.974,127.149,81.575)
O2': (51.526,127.961,82.640)
N1: (54.128,125.759,81.775)
O4: (57.987,125.234,80.844)
O2: (54.828,127.493,83.106)
C6: (54.481,124.766,80.896)
C5: (55.748,124.532,80.547)
O3': (49.653,127.210,80.789)
Image (generated by PyMOL):