Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01317:01318
Extra
PDB:
ATOM 1 O3' A A1316 43.988 122.111 79.931 1.00 35.00 O
ATOM 2 P A A1317 45.046 123.321 79.917 1.00 35.05 P
ATOM 3 OP1 A A1317 45.363 123.578 81.328 1.00 35.26 O
ATOM 4 OP2 A A1317 44.548 124.427 79.082 1.00 36.17 O
ATOM 5 O5' A A1317 46.326 122.683 79.234 1.00 31.63 O
ATOM 6 C5' A A1317 46.901 121.503 79.791 1.00 33.00 C
ATOM 7 C4' A A1317 47.532 120.666 78.716 1.00 33.91 C
ATOM 8 O4' A A1317 46.570 120.407 77.676 1.00 34.30 O
ATOM 9 C3' A A1317 48.662 121.329 77.957 1.00 33.48 C
ATOM 10 O3' A A1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 11 C2' A A1317 48.739 120.474 76.690 1.00 34.28 C
ATOM 12 O2' A A1317 49.500 119.290 76.850 1.00 34.97 O
ATOM 13 C1' A A1317 47.268 120.083 76.488 1.00 34.16 C
ATOM 14 N9 A A1317 46.587 120.709 75.356 1.00 33.37 N
ATOM 15 C8 A A1317 45.602 121.665 75.379 1.00 33.61 C
ATOM 16 N7 A A1317 45.176 122.012 74.192 1.00 32.65 N
ATOM 17 C5 A A1317 45.930 121.234 73.327 1.00 32.05 C
ATOM 18 C6 A A1317 45.950 121.129 71.932 1.00 31.33 C
ATOM 19 N6 A A1317 45.146 121.825 71.129 1.00 31.46 N
ATOM 20 N1 A A1317 46.831 120.270 71.378 1.00 31.46 N
ATOM 21 C2 A A1317 47.629 119.561 72.186 1.00 33.08 C
ATOM 22 N3 A A1317 47.698 119.564 73.516 1.00 33.69 N
ATOM 23 C4 A A1317 46.810 120.433 74.030 1.00 33.05 C
ATOM 24 P U A1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 25 OP1 U A1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 26 OP2 U A1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 27 O5' U A1318 50.220 123.696 79.182 1.00 31.91 O
TER
ATOM 1 O3' A B1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 2 P U B1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U B1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U B1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U B1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U B1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U B1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U B1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U B1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U B1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U B1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U B1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U B1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U B1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U B1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U B1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U B1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U B1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U B1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U B1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U B1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C B1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C B1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C B1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C B1319 49.501 127.038 77.934 1.00 31.37 O
TER
ATOM 2 P A A1317 45.046 123.321 79.917 1.00 35.05 P
ATOM 3 OP1 A A1317 45.363 123.578 81.328 1.00 35.26 O
ATOM 4 OP2 A A1317 44.548 124.427 79.082 1.00 36.17 O
ATOM 5 O5' A A1317 46.326 122.683 79.234 1.00 31.63 O
ATOM 6 C5' A A1317 46.901 121.503 79.791 1.00 33.00 C
ATOM 7 C4' A A1317 47.532 120.666 78.716 1.00 33.91 C
ATOM 8 O4' A A1317 46.570 120.407 77.676 1.00 34.30 O
ATOM 9 C3' A A1317 48.662 121.329 77.957 1.00 33.48 C
ATOM 10 O3' A A1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 11 C2' A A1317 48.739 120.474 76.690 1.00 34.28 C
ATOM 12 O2' A A1317 49.500 119.290 76.850 1.00 34.97 O
ATOM 13 C1' A A1317 47.268 120.083 76.488 1.00 34.16 C
ATOM 14 N9 A A1317 46.587 120.709 75.356 1.00 33.37 N
ATOM 15 C8 A A1317 45.602 121.665 75.379 1.00 33.61 C
ATOM 16 N7 A A1317 45.176 122.012 74.192 1.00 32.65 N
ATOM 17 C5 A A1317 45.930 121.234 73.327 1.00 32.05 C
ATOM 18 C6 A A1317 45.950 121.129 71.932 1.00 31.33 C
ATOM 19 N6 A A1317 45.146 121.825 71.129 1.00 31.46 N
ATOM 20 N1 A A1317 46.831 120.270 71.378 1.00 31.46 N
ATOM 21 C2 A A1317 47.629 119.561 72.186 1.00 33.08 C
ATOM 22 N3 A A1317 47.698 119.564 73.516 1.00 33.69 N
ATOM 23 C4 A A1317 46.810 120.433 74.030 1.00 33.05 C
ATOM 24 P U A1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 25 OP1 U A1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 26 OP2 U A1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 27 O5' U A1318 50.220 123.696 79.182 1.00 31.91 O
TER
ATOM 1 O3' A B1317 49.828 121.213 78.752 1.00 32.24 O
ATOM 2 P U B1318 50.948 122.356 78.724 1.00 33.12 P
ATOM 3 OP1 U B1318 51.411 122.555 77.328 1.00 33.19 O
ATOM 4 OP2 U B1318 51.913 121.925 79.772 1.00 31.88 O
ATOM 5 O5' U B1318 50.220 123.696 79.182 1.00 31.91 O
ATOM 6 C5' U B1318 49.713 123.858 80.520 1.00 33.64 C
ATOM 7 C4' U B1318 50.448 124.975 81.233 1.00 34.57 C
ATOM 8 O4' U B1318 51.796 124.563 81.540 1.00 35.00 O
ATOM 9 C3' U B1318 50.687 126.250 80.443 1.00 34.84 C
ATOM 10 O3' U B1318 49.522 127.058 80.458 1.00 34.59 O
ATOM 11 C2' U B1318 51.805 126.925 81.234 1.00 34.90 C
ATOM 12 O2' U B1318 51.306 127.686 82.312 1.00 36.57 O
ATOM 13 C1' U B1318 52.563 125.721 81.803 1.00 34.45 C
ATOM 14 N1 U B1318 53.952 125.512 81.358 1.00 34.03 N
ATOM 15 C2 U B1318 54.908 126.394 81.829 1.00 33.25 C
ATOM 16 O2 U B1318 54.633 127.358 82.523 1.00 34.46 O
ATOM 17 N3 U B1318 56.195 126.107 81.457 1.00 30.79 N
ATOM 18 C4 U B1318 56.615 125.062 80.677 1.00 30.09 C
ATOM 19 O4 U B1318 57.820 124.872 80.525 1.00 28.50 O
ATOM 20 C5 U B1318 55.569 124.223 80.194 1.00 30.82 C
ATOM 21 C6 U B1318 54.307 124.469 80.540 1.00 31.99 C
ATOM 22 P C B1319 49.161 127.958 79.187 1.00 32.79 P
ATOM 23 OP1 C B1319 50.081 129.115 79.181 1.00 34.43 O
ATOM 24 OP2 C B1319 47.701 128.181 79.248 1.00 31.39 O
ATOM 25 O5' C B1319 49.501 127.038 77.934 1.00 31.37 O
TER
Atoms:
OP1: (45.363,123.578,81.328)
OP2: (44.548,124.427,79.082)
C3': (48.662,121.329,77.957)
C1': (47.268,120.083,76.488)
C5': (46.901,121.503,79.791)
O4': (46.570,120.407,77.676)
C8: (45.602,121.665,75.379)
O2': (49.500,119.290,76.850)
C6: (45.950,121.129,71.932)
C5: (45.930,121.234,73.327)
C4: (46.810,120.433,74.030)
P: (45.046,123.321,79.917)
C4': (47.532,120.666,78.716)
C2': (48.739,120.474,76.690)
C2: (47.629,119.561,72.186)
N1: (46.831,120.270,71.378)
N3: (47.698,119.564,73.516)
N6: (45.146,121.825,71.129)
N7: (45.176,122.012,74.192)
N9: (46.587,120.709,75.356)
O5': (46.326,122.683,79.234)
O3': (49.828,121.213,78.752)
OP2: (44.548,124.427,79.082)
C3': (48.662,121.329,77.957)
C1': (47.268,120.083,76.488)
C5': (46.901,121.503,79.791)
O4': (46.570,120.407,77.676)
C8: (45.602,121.665,75.379)
O2': (49.500,119.290,76.850)
C6: (45.950,121.129,71.932)
C5: (45.930,121.234,73.327)
C4: (46.810,120.433,74.030)
P: (45.046,123.321,79.917)
C4': (47.532,120.666,78.716)
C2': (48.739,120.474,76.690)
C2: (47.629,119.561,72.186)
N1: (46.831,120.270,71.378)
N3: (47.698,119.564,73.516)
N6: (45.146,121.825,71.129)
N7: (45.176,122.012,74.192)
N9: (46.587,120.709,75.356)
O5': (46.326,122.683,79.234)
O3': (49.828,121.213,78.752)
C4: (56.615,125.062,80.677)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
N3: (56.195,126.107,81.457)
OP1: (51.411,122.555,77.328)
OP2: (51.913,121.925,79.772)
C2: (54.908,126.394,81.829)
C1': (52.563,125.721,81.803)
C3': (50.687,126.250,80.443)
O5': (50.220,123.696,79.182)
O4': (51.796,124.563,81.540)
C5': (49.713,123.858,80.520)
P: (50.948,122.356,78.724)
C4': (50.448,124.975,81.233)
C2': (51.805,126.925,81.234)
O2': (51.306,127.686,82.312)
N1: (53.952,125.512,81.358)
O4: (57.820,124.872,80.525)
O2: (54.633,127.358,82.523)
C6: (54.307,124.469,80.540)
C5: (55.569,124.223,80.194)
O3': (49.522,127.058,80.458)
Image (generated by PyMOL):