Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0559:0574
Extra
PDB:
ATOM 1 O3' C A 558 -4.353 98.573 121.532 1.00 76.37 O
ATOM 2 P C A 559 -4.786 97.691 122.801 1.00 77.71 P
ATOM 3 OP1 C A 559 -4.137 98.276 124.001 1.00 78.37 O
ATOM 4 OP2 C A 559 -4.562 96.261 122.469 1.00 76.89 O
ATOM 5 O5' C A 559 -6.354 97.932 122.914 1.00 79.49 O
ATOM 6 C5' C A 559 -6.891 99.219 123.276 1.00 81.96 C
ATOM 7 C4' C A 559 -8.399 99.180 123.215 1.00 84.00 C
ATOM 8 O4' C A 559 -8.806 98.892 121.847 1.00 83.97 O
ATOM 9 C3' C A 559 -9.033 98.064 124.033 1.00 85.60 C
ATOM 10 O3' C A 559 -9.193 98.409 125.408 1.00 87.89 O
ATOM 11 C2' C A 559 -10.354 97.838 123.312 1.00 85.05 C
ATOM 12 O2' C A 559 -11.328 98.805 123.659 1.00 85.16 O
ATOM 13 C1' C A 559 -9.922 98.013 121.852 1.00 83.98 C
ATOM 14 N1 C A 559 -9.501 96.746 121.231 1.00 82.90 N
ATOM 15 C2 C A 559 -10.461 95.958 120.596 1.00 82.76 C
ATOM 16 O2 C A 559 -11.630 96.361 120.555 1.00 83.09 O
ATOM 17 N3 C A 559 -10.090 94.777 120.040 1.00 82.19 N
ATOM 18 C4 C A 559 -8.814 94.383 120.101 1.00 81.79 C
ATOM 19 N4 C A 559 -8.491 93.208 119.544 1.00 81.03 N
ATOM 20 C5 C A 559 -7.811 95.175 120.736 1.00 81.75 C
ATOM 21 C6 C A 559 -8.196 96.338 121.280 1.00 82.28 C
ATOM 22 P G A 560 -9.047 97.268 126.532 1.00 89.78 P
ATOM 23 OP1 G A 560 -9.455 97.879 127.823 1.00 89.61 O
ATOM 24 OP2 G A 560 -7.699 96.658 126.407 1.00 89.70 O
ATOM 25 O5' G A 560 -10.140 96.179 126.116 1.00 90.56 O
TER
ATOM 1 O3' C B 573 -10.949 83.939 116.074 1.00 76.14 O
ATOM 2 P C B 574 -10.979 84.772 114.695 1.00 75.96 P
ATOM 3 OP1 C B 574 -12.045 84.219 113.820 1.00 75.48 O
ATOM 4 OP2 C B 574 -9.586 84.836 114.190 1.00 76.48 O
ATOM 5 O5' C B 574 -11.445 86.229 115.130 1.00 74.60 O
ATOM 6 C5' C B 574 -12.776 86.452 115.583 1.00 74.32 C
ATOM 7 C4' C B 574 -12.898 87.837 116.143 1.00 74.83 C
ATOM 8 O4' C B 574 -11.990 87.985 117.260 1.00 74.96 O
ATOM 9 C3' C B 574 -12.491 88.939 115.189 1.00 75.26 C
ATOM 10 O3' C B 574 -13.568 89.257 114.325 1.00 75.41 O
ATOM 11 C2' C B 574 -12.149 90.077 116.141 1.00 75.46 C
ATOM 12 O2' C B 574 -13.297 90.753 116.620 1.00 75.77 O
ATOM 13 C1' C B 574 -11.488 89.312 117.292 1.00 75.15 C
ATOM 14 N1 C B 574 -10.018 89.251 117.202 1.00 74.93 N
ATOM 15 C2 C B 574 -9.259 90.281 117.782 1.00 74.47 C
ATOM 16 O2 C B 574 -9.845 91.223 118.340 1.00 73.37 O
ATOM 17 N3 C B 574 -7.909 90.222 117.714 1.00 74.48 N
ATOM 18 C4 C B 574 -7.315 89.199 117.088 1.00 74.82 C
ATOM 19 N4 C B 574 -5.979 89.188 117.035 1.00 74.81 N
ATOM 20 C5 C B 574 -8.062 88.143 116.485 1.00 74.25 C
ATOM 21 C6 C B 574 -9.397 88.208 116.567 1.00 74.60 C
ATOM 22 P A B 575 -13.271 89.750 112.829 1.00 75.38 P
ATOM 23 OP1 A B 575 -12.653 91.103 112.902 1.00 75.12 O
ATOM 24 OP2 A B 575 -14.524 89.561 112.058 1.00 75.45 O
ATOM 25 O5' A B 575 -12.214 88.699 112.263 1.00 74.76 O
TER
ATOM 2 P C A 559 -4.786 97.691 122.801 1.00 77.71 P
ATOM 3 OP1 C A 559 -4.137 98.276 124.001 1.00 78.37 O
ATOM 4 OP2 C A 559 -4.562 96.261 122.469 1.00 76.89 O
ATOM 5 O5' C A 559 -6.354 97.932 122.914 1.00 79.49 O
ATOM 6 C5' C A 559 -6.891 99.219 123.276 1.00 81.96 C
ATOM 7 C4' C A 559 -8.399 99.180 123.215 1.00 84.00 C
ATOM 8 O4' C A 559 -8.806 98.892 121.847 1.00 83.97 O
ATOM 9 C3' C A 559 -9.033 98.064 124.033 1.00 85.60 C
ATOM 10 O3' C A 559 -9.193 98.409 125.408 1.00 87.89 O
ATOM 11 C2' C A 559 -10.354 97.838 123.312 1.00 85.05 C
ATOM 12 O2' C A 559 -11.328 98.805 123.659 1.00 85.16 O
ATOM 13 C1' C A 559 -9.922 98.013 121.852 1.00 83.98 C
ATOM 14 N1 C A 559 -9.501 96.746 121.231 1.00 82.90 N
ATOM 15 C2 C A 559 -10.461 95.958 120.596 1.00 82.76 C
ATOM 16 O2 C A 559 -11.630 96.361 120.555 1.00 83.09 O
ATOM 17 N3 C A 559 -10.090 94.777 120.040 1.00 82.19 N
ATOM 18 C4 C A 559 -8.814 94.383 120.101 1.00 81.79 C
ATOM 19 N4 C A 559 -8.491 93.208 119.544 1.00 81.03 N
ATOM 20 C5 C A 559 -7.811 95.175 120.736 1.00 81.75 C
ATOM 21 C6 C A 559 -8.196 96.338 121.280 1.00 82.28 C
ATOM 22 P G A 560 -9.047 97.268 126.532 1.00 89.78 P
ATOM 23 OP1 G A 560 -9.455 97.879 127.823 1.00 89.61 O
ATOM 24 OP2 G A 560 -7.699 96.658 126.407 1.00 89.70 O
ATOM 25 O5' G A 560 -10.140 96.179 126.116 1.00 90.56 O
TER
ATOM 1 O3' C B 573 -10.949 83.939 116.074 1.00 76.14 O
ATOM 2 P C B 574 -10.979 84.772 114.695 1.00 75.96 P
ATOM 3 OP1 C B 574 -12.045 84.219 113.820 1.00 75.48 O
ATOM 4 OP2 C B 574 -9.586 84.836 114.190 1.00 76.48 O
ATOM 5 O5' C B 574 -11.445 86.229 115.130 1.00 74.60 O
ATOM 6 C5' C B 574 -12.776 86.452 115.583 1.00 74.32 C
ATOM 7 C4' C B 574 -12.898 87.837 116.143 1.00 74.83 C
ATOM 8 O4' C B 574 -11.990 87.985 117.260 1.00 74.96 O
ATOM 9 C3' C B 574 -12.491 88.939 115.189 1.00 75.26 C
ATOM 10 O3' C B 574 -13.568 89.257 114.325 1.00 75.41 O
ATOM 11 C2' C B 574 -12.149 90.077 116.141 1.00 75.46 C
ATOM 12 O2' C B 574 -13.297 90.753 116.620 1.00 75.77 O
ATOM 13 C1' C B 574 -11.488 89.312 117.292 1.00 75.15 C
ATOM 14 N1 C B 574 -10.018 89.251 117.202 1.00 74.93 N
ATOM 15 C2 C B 574 -9.259 90.281 117.782 1.00 74.47 C
ATOM 16 O2 C B 574 -9.845 91.223 118.340 1.00 73.37 O
ATOM 17 N3 C B 574 -7.909 90.222 117.714 1.00 74.48 N
ATOM 18 C4 C B 574 -7.315 89.199 117.088 1.00 74.82 C
ATOM 19 N4 C B 574 -5.979 89.188 117.035 1.00 74.81 N
ATOM 20 C5 C B 574 -8.062 88.143 116.485 1.00 74.25 C
ATOM 21 C6 C B 574 -9.397 88.208 116.567 1.00 74.60 C
ATOM 22 P A B 575 -13.271 89.750 112.829 1.00 75.38 P
ATOM 23 OP1 A B 575 -12.653 91.103 112.902 1.00 75.12 O
ATOM 24 OP2 A B 575 -14.524 89.561 112.058 1.00 75.45 O
ATOM 25 O5' A B 575 -12.214 88.699 112.263 1.00 74.76 O
TER
Atoms:
C2: (-10.461,95.958,120.596)
OP1: (-4.137,98.276,124.001)
OP2: (-4.562,96.261,122.469)
C4: (-8.814,94.383,120.101)
O5': (-6.354,97.932,122.914)
C3': (-9.033,98.064,124.033)
C1': (-9.922,98.013,121.852)
O4': (-8.806,98.892,121.847)
C5': (-6.891,99.219,123.276)
P: (-4.786,97.691,122.801)
O2: (-11.630,96.361,120.555)
C4': (-8.399,99.180,123.215)
C2': (-10.354,97.838,123.312)
O2': (-11.328,98.805,123.659)
N1: (-9.501,96.746,121.231)
N3: (-10.090,94.777,120.040)
N4: (-8.491,93.208,119.544)
C6: (-8.196,96.338,121.280)
C5: (-7.811,95.175,120.736)
O3': (-9.193,98.409,125.408)
OP1: (-4.137,98.276,124.001)
OP2: (-4.562,96.261,122.469)
C4: (-8.814,94.383,120.101)
O5': (-6.354,97.932,122.914)
C3': (-9.033,98.064,124.033)
C1': (-9.922,98.013,121.852)
O4': (-8.806,98.892,121.847)
C5': (-6.891,99.219,123.276)
P: (-4.786,97.691,122.801)
O2: (-11.630,96.361,120.555)
C4': (-8.399,99.180,123.215)
C2': (-10.354,97.838,123.312)
O2': (-11.328,98.805,123.659)
N1: (-9.501,96.746,121.231)
N3: (-10.090,94.777,120.040)
N4: (-8.491,93.208,119.544)
C6: (-8.196,96.338,121.280)
C5: (-7.811,95.175,120.736)
O3': (-9.193,98.409,125.408)
C2: (-9.259,90.281,117.782)
OP1: (-12.045,84.219,113.820)
OP2: (-9.586,84.836,114.190)
C4: (-7.315,89.199,117.088)
O5': (-11.445,86.229,115.130)
C3': (-12.491,88.939,115.189)
C1': (-11.488,89.312,117.292)
O4': (-11.990,87.985,117.260)
C5': (-12.776,86.452,115.583)
P: (-10.979,84.772,114.695)
O2: (-9.845,91.223,118.340)
C4': (-12.898,87.837,116.143)
C2': (-12.149,90.077,116.141)
O2': (-13.297,90.753,116.620)
N1: (-10.018,89.251,117.202)
N3: (-7.909,90.222,117.714)
N4: (-5.979,89.188,117.035)
C6: (-9.397,88.208,116.567)
C5: (-8.062,88.143,116.485)
O3': (-13.568,89.257,114.325)
OP1: (-12.045,84.219,113.820)
OP2: (-9.586,84.836,114.190)
C4: (-7.315,89.199,117.088)
O5': (-11.445,86.229,115.130)
C3': (-12.491,88.939,115.189)
C1': (-11.488,89.312,117.292)
O4': (-11.990,87.985,117.260)
C5': (-12.776,86.452,115.583)
P: (-10.979,84.772,114.695)
O2: (-9.845,91.223,118.340)
C4': (-12.898,87.837,116.143)
C2': (-12.149,90.077,116.141)
O2': (-13.297,90.753,116.620)
N1: (-10.018,89.251,117.202)
N3: (-7.909,90.222,117.714)
N4: (-5.979,89.188,117.035)
C6: (-9.397,88.208,116.567)
C5: (-8.062,88.143,116.485)
O3': (-13.568,89.257,114.325)
Image (generated by PyMOL):