Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11379:11380
Extra
PDB:
ATOM 1 O3' G A1378 56.364 1.648 69.846 1.00 32.49 O
ATOM 2 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 3 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 4 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 5 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
ATOM 6 C5' A A1379 54.116 0.091 71.044 1.00 33.59 C
ATOM 7 C4' A A1379 53.929 -1.235 71.734 1.00 33.55 C
ATOM 8 O4' A A1379 55.189 -1.942 71.858 1.00 33.60 O
ATOM 9 C3' A A1379 53.340 -1.205 73.136 1.00 33.60 C
ATOM 10 O3' A A1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 11 C2' A A1379 53.843 -2.520 73.732 1.00 33.61 C
ATOM 12 O2' A A1379 52.964 -3.573 73.377 1.00 33.50 O
ATOM 13 C1' A A1379 55.160 -2.768 72.997 1.00 33.63 C
ATOM 14 N9 A A1379 56.355 -2.509 73.829 1.00 33.77 N
ATOM 15 C8 A A1379 57.263 -1.481 73.787 1.00 33.87 C
ATOM 16 N7 A A1379 58.235 -1.619 74.645 1.00 33.99 N
ATOM 17 C5 A A1379 57.972 -2.803 75.280 1.00 33.97 C
ATOM 18 C6 A A1379 58.650 -3.505 76.279 1.00 34.08 C
ATOM 19 N6 A A1379 59.752 -3.103 76.881 1.00 34.23 N
ATOM 20 N1 A A1379 58.110 -4.664 76.701 1.00 34.04 N
ATOM 21 C2 A A1379 56.953 -5.071 76.121 1.00 33.90 C
ATOM 22 N3 A A1379 56.236 -4.541 75.144 1.00 33.79 N
ATOM 23 C4 A A1379 56.811 -3.369 74.788 1.00 33.83 C
ATOM 24 P U A1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 25 OP1 U A1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 26 OP2 U A1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 27 O5' U A1380 51.499 1.153 73.789 1.00 38.50 O
TER
ATOM 1 O3' A B1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 2 P U B1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 3 OP1 U B1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 4 OP2 U B1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 5 O5' U B1380 51.499 1.153 73.789 1.00 38.50 O
ATOM 6 C5' U B1380 51.211 1.815 72.587 1.00 38.46 C
ATOM 7 C4' U B1380 50.419 3.044 72.854 1.00 38.53 C
ATOM 8 O4' U B1380 49.022 2.721 72.883 1.00 38.46 O
ATOM 9 C3' U B1380 50.665 3.682 74.195 1.00 38.67 C
ATOM 10 O3' U B1380 51.812 4.495 74.160 1.00 38.78 O
ATOM 11 C2' U B1380 49.371 4.455 74.462 1.00 38.70 C
ATOM 12 O2' U B1380 49.406 5.730 73.857 1.00 38.78 O
ATOM 13 C1' U B1380 48.342 3.631 73.715 1.00 38.56 C
ATOM 14 N1 U B1380 47.428 2.907 74.612 1.00 38.54 N
ATOM 15 C2 U B1380 46.377 3.659 75.035 1.00 38.60 C
ATOM 16 O2 U B1380 46.292 4.819 74.700 1.00 38.67 O
ATOM 17 N3 U B1380 45.502 3.047 75.874 1.00 38.59 N
ATOM 18 C4 U B1380 45.572 1.768 76.277 1.00 38.53 C
ATOM 19 O4 U B1380 44.711 1.328 77.004 1.00 38.54 O
ATOM 20 C5 U B1380 46.675 1.044 75.792 1.00 38.47 C
ATOM 21 C6 U B1380 47.551 1.615 74.984 1.00 38.47 C
ATOM 22 P C B1381 52.584 4.891 75.489 1.00 32.56 P
ATOM 23 OP1 C B1381 51.644 5.639 76.311 1.00 32.64 O
ATOM 24 OP2 C B1381 53.866 5.558 75.046 1.00 32.64 O
ATOM 25 O5' C B1381 52.893 3.481 76.176 1.00 32.51 O
TER
ATOM 2 P A A1379 55.530 2.263 71.018 1.00 33.80 P
ATOM 3 OP1 A A1379 54.386 2.970 70.415 1.00 33.76 O
ATOM 4 OP2 A A1379 56.418 3.030 71.870 1.00 33.95 O
ATOM 5 O5' A A1379 55.021 0.945 71.729 1.00 33.72 O
ATOM 6 C5' A A1379 54.116 0.091 71.044 1.00 33.59 C
ATOM 7 C4' A A1379 53.929 -1.235 71.734 1.00 33.55 C
ATOM 8 O4' A A1379 55.189 -1.942 71.858 1.00 33.60 O
ATOM 9 C3' A A1379 53.340 -1.205 73.136 1.00 33.60 C
ATOM 10 O3' A A1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 11 C2' A A1379 53.843 -2.520 73.732 1.00 33.61 C
ATOM 12 O2' A A1379 52.964 -3.573 73.377 1.00 33.50 O
ATOM 13 C1' A A1379 55.160 -2.768 72.997 1.00 33.63 C
ATOM 14 N9 A A1379 56.355 -2.509 73.829 1.00 33.77 N
ATOM 15 C8 A A1379 57.263 -1.481 73.787 1.00 33.87 C
ATOM 16 N7 A A1379 58.235 -1.619 74.645 1.00 33.99 N
ATOM 17 C5 A A1379 57.972 -2.803 75.280 1.00 33.97 C
ATOM 18 C6 A A1379 58.650 -3.505 76.279 1.00 34.08 C
ATOM 19 N6 A A1379 59.752 -3.103 76.881 1.00 34.23 N
ATOM 20 N1 A A1379 58.110 -4.664 76.701 1.00 34.04 N
ATOM 21 C2 A A1379 56.953 -5.071 76.121 1.00 33.90 C
ATOM 22 N3 A A1379 56.236 -4.541 75.144 1.00 33.79 N
ATOM 23 C4 A A1379 56.811 -3.369 74.788 1.00 33.83 C
ATOM 24 P U A1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 25 OP1 U A1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 26 OP2 U A1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 27 O5' U A1380 51.499 1.153 73.789 1.00 38.50 O
TER
ATOM 1 O3' A B1379 51.933 -1.175 73.064 1.00 33.53 O
ATOM 2 P U B1380 51.019 -0.326 74.046 1.00 38.41 P
ATOM 3 OP1 U B1380 51.329 -0.722 75.405 1.00 38.50 O
ATOM 4 OP2 U B1380 49.659 -0.504 73.575 1.00 38.32 O
ATOM 5 O5' U B1380 51.499 1.153 73.789 1.00 38.50 O
ATOM 6 C5' U B1380 51.211 1.815 72.587 1.00 38.46 C
ATOM 7 C4' U B1380 50.419 3.044 72.854 1.00 38.53 C
ATOM 8 O4' U B1380 49.022 2.721 72.883 1.00 38.46 O
ATOM 9 C3' U B1380 50.665 3.682 74.195 1.00 38.67 C
ATOM 10 O3' U B1380 51.812 4.495 74.160 1.00 38.78 O
ATOM 11 C2' U B1380 49.371 4.455 74.462 1.00 38.70 C
ATOM 12 O2' U B1380 49.406 5.730 73.857 1.00 38.78 O
ATOM 13 C1' U B1380 48.342 3.631 73.715 1.00 38.56 C
ATOM 14 N1 U B1380 47.428 2.907 74.612 1.00 38.54 N
ATOM 15 C2 U B1380 46.377 3.659 75.035 1.00 38.60 C
ATOM 16 O2 U B1380 46.292 4.819 74.700 1.00 38.67 O
ATOM 17 N3 U B1380 45.502 3.047 75.874 1.00 38.59 N
ATOM 18 C4 U B1380 45.572 1.768 76.277 1.00 38.53 C
ATOM 19 O4 U B1380 44.711 1.328 77.004 1.00 38.54 O
ATOM 20 C5 U B1380 46.675 1.044 75.792 1.00 38.47 C
ATOM 21 C6 U B1380 47.551 1.615 74.984 1.00 38.47 C
ATOM 22 P C B1381 52.584 4.891 75.489 1.00 32.56 P
ATOM 23 OP1 C B1381 51.644 5.639 76.311 1.00 32.64 O
ATOM 24 OP2 C B1381 53.866 5.558 75.046 1.00 32.64 O
ATOM 25 O5' C B1381 52.893 3.481 76.176 1.00 32.51 O
TER
Atoms:
OP1: (54.386,2.970,70.415)
OP2: (56.418,3.030,71.870)
C3': (53.340,-1.205,73.136)
C1': (55.160,-2.768,72.997)
C5': (54.116,0.091,71.044)
O4': (55.189,-1.942,71.858)
C8: (57.263,-1.481,73.787)
O2': (52.964,-3.573,73.377)
C6: (58.650,-3.505,76.279)
C5: (57.972,-2.803,75.280)
C4: (56.811,-3.369,74.788)
P: (55.530,2.263,71.018)
C4': (53.929,-1.235,71.734)
C2': (53.843,-2.520,73.732)
C2: (56.953,-5.071,76.121)
N1: (58.110,-4.664,76.701)
N3: (56.236,-4.541,75.144)
N6: (59.752,-3.103,76.881)
N7: (58.235,-1.619,74.645)
N9: (56.355,-2.509,73.829)
O5': (55.021,0.945,71.729)
O3': (51.933,-1.175,73.064)
OP2: (56.418,3.030,71.870)
C3': (53.340,-1.205,73.136)
C1': (55.160,-2.768,72.997)
C5': (54.116,0.091,71.044)
O4': (55.189,-1.942,71.858)
C8: (57.263,-1.481,73.787)
O2': (52.964,-3.573,73.377)
C6: (58.650,-3.505,76.279)
C5: (57.972,-2.803,75.280)
C4: (56.811,-3.369,74.788)
P: (55.530,2.263,71.018)
C4': (53.929,-1.235,71.734)
C2': (53.843,-2.520,73.732)
C2: (56.953,-5.071,76.121)
N1: (58.110,-4.664,76.701)
N3: (56.236,-4.541,75.144)
N6: (59.752,-3.103,76.881)
N7: (58.235,-1.619,74.645)
N9: (56.355,-2.509,73.829)
O5': (55.021,0.945,71.729)
O3': (51.933,-1.175,73.064)
C4: (45.572,1.768,76.277)
N3: (45.502,3.047,75.874)
OP1: (51.329,-0.722,75.405)
OP2: (49.659,-0.504,73.575)
C2: (46.377,3.659,75.035)
C1': (48.342,3.631,73.715)
C3': (50.665,3.682,74.195)
O5': (51.499,1.153,73.789)
O4': (49.022,2.721,72.883)
C5': (51.211,1.815,72.587)
P: (51.019,-0.326,74.046)
C4': (50.419,3.044,72.854)
C2': (49.371,4.455,74.462)
O2': (49.406,5.730,73.857)
N1: (47.428,2.907,74.612)
O4: (44.711,1.328,77.004)
O2: (46.292,4.819,74.700)
C6: (47.551,1.615,74.984)
C5: (46.675,1.044,75.792)
O3': (51.812,4.495,74.160)
N3: (45.502,3.047,75.874)
OP1: (51.329,-0.722,75.405)
OP2: (49.659,-0.504,73.575)
C2: (46.377,3.659,75.035)
C1': (48.342,3.631,73.715)
C3': (50.665,3.682,74.195)
O5': (51.499,1.153,73.789)
O4': (49.022,2.721,72.883)
C5': (51.211,1.815,72.587)
P: (51.019,-0.326,74.046)
C4': (50.419,3.044,72.854)
C2': (49.371,4.455,74.462)
O2': (49.406,5.730,73.857)
N1: (47.428,2.907,74.612)
O4: (44.711,1.328,77.004)
O2: (46.292,4.819,74.700)
C6: (47.551,1.615,74.984)
C5: (46.675,1.044,75.792)
O3': (51.812,4.495,74.160)
Image (generated by PyMOL):