ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NTA:A7:A8

Extra

PDB:
ATOM 1 O3' C A 6 16.199 34.820 -12.876 1.00 58.19 O
ATOM 2 P A A 7 15.862 35.900 -14.002 1.00 58.22 P
ATOM 3 OP1 A A 7 16.146 35.272 -15.308 1.00 59.62 O
ATOM 4 OP2 A A 7 16.488 37.192 -13.622 1.00 56.76 O
ATOM 5 O5' A A 7 14.286 36.042 -13.857 1.00 59.55 O
ATOM 6 C5' A A 7 13.762 37.296 -13.618 1.00 60.40 C
ATOM 7 C4' A A 7 12.533 37.211 -12.762 1.00 60.76 C
ATOM 8 O4' A A 7 12.735 36.361 -11.613 1.00 62.42 O
ATOM 9 C3' A A 7 12.136 38.556 -12.186 1.00 60.85 C
ATOM 10 O3' A A 7 11.102 39.130 -12.965 1.00 59.77 O
ATOM 11 C2' A A 7 11.676 38.243 -10.771 1.00 62.12 C
ATOM 12 O2' A A 7 10.389 38.784 -10.489 1.00 64.43 O
ATOM 13 C1' A A 7 11.678 36.711 -10.751 1.00 63.70 C
ATOM 14 N9 A A 7 11.798 36.138 -9.390 1.00 66.11 N
ATOM 15 C8 A A 7 12.506 36.654 -8.338 1.00 66.66 C
ATOM 16 N7 A A 7 12.376 35.977 -7.221 1.00 67.39 N
ATOM 17 C5 A A 7 11.532 34.931 -7.543 1.00 67.39 C
ATOM 18 C6 A A 7 11.003 33.857 -6.781 1.00 66.40 C
ATOM 19 N6 A A 7 11.292 33.661 -5.505 1.00 64.08 N
ATOM 20 N1 A A 7 10.172 32.989 -7.392 1.00 66.81 N
ATOM 21 C2 A A 7 9.897 33.179 -8.693 1.00 67.85 C
ATOM 22 N3 A A 7 10.320 34.160 -9.512 1.00 67.82 N
ATOM 23 C4 A A 7 11.151 35.013 -8.875 1.00 67.41 C
ATOM 24 P U A 8 11.283 39.518 -14.514 1.00 56.80 P
ATOM 25 OP1 U A 8 11.218 38.283 -15.333 1.00 57.89 O
ATOM 26 OP2 U A 8 12.488 40.389 -14.595 1.00 56.07 O
ATOM 27 O5' U A 8 9.965 40.368 -14.820 1.00 50.37 O
TER

ATOM 1 O3' A B 7 11.102 39.130 -12.965 1.00 59.77 O
ATOM 2 P U B 8 11.283 39.518 -14.514 1.00 56.80 P
ATOM 3 OP1 U B 8 11.218 38.283 -15.333 1.00 57.89 O
ATOM 4 OP2 U B 8 12.488 40.389 -14.595 1.00 56.07 O
ATOM 5 O5' U B 8 9.965 40.368 -14.820 1.00 50.37 O
ATOM 6 C5' U B 8 9.292 40.945 -13.787 1.00 47.58 C
ATOM 7 C4' U B 8 9.809 42.339 -13.556 1.00 46.02 C
ATOM 8 O4' U B 8 9.195 43.212 -14.530 1.00 45.74 O
ATOM 9 C3' U B 8 9.448 42.905 -12.186 1.00 46.06 C
ATOM 10 O3' U B 8 10.525 43.748 -11.631 1.00 44.38 O
ATOM 11 C2' U B 8 8.092 43.629 -12.447 1.00 45.13 C
ATOM 12 O2' U B 8 7.935 44.856 -11.763 1.00 44.20 O
ATOM 13 C1' U B 8 8.057 43.867 -13.964 1.00 44.67 C
ATOM 14 N1 U B 8 6.754 43.384 -14.610 1.00 42.99 N
ATOM 15 C2 U B 8 5.578 44.094 -14.370 1.00 41.58 C
ATOM 16 O2 U B 8 5.520 45.091 -13.667 1.00 40.18 O
ATOM 17 N3 U B 8 4.454 43.584 -14.979 1.00 41.22 N
ATOM 18 C4 U B 8 4.379 42.474 -15.809 1.00 41.78 C
ATOM 19 O4 U B 8 3.295 42.143 -16.294 1.00 42.98 O
ATOM 20 C5 U B 8 5.630 41.789 -16.019 1.00 42.22 C
ATOM 21 C6 U B 8 6.747 42.260 -15.433 1.00 42.69 C
ATOM 22 P U B 9 11.300 43.400 -10.240 1.00 43.44 P
ATOM 23 OP1 U B 9 12.007 44.624 -9.803 1.00 42.16 O
ATOM 24 OP2 U B 9 12.096 42.147 -10.407 1.00 42.37 O
ATOM 25 O5' U B 9 10.080 43.154 -9.193 1.00 42.26 O
TER

Atoms:
OP1: (16.146,35.272,-15.308)
OP2: (16.488,37.192,-13.622)
C3': (12.136,38.556,-12.186)
C1': (11.678,36.711,-10.751)
C5': (13.762,37.296,-13.618)
O4': (12.735,36.361,-11.613)
C8: (12.506,36.654,-8.338)
O2': (10.389,38.784,-10.489)
C6: (11.003,33.857,-6.781)
C5: (11.532,34.931,-7.543)
C4: (11.151,35.013,-8.875)
P: (15.862,35.900,-14.002)
C4': (12.533,37.211,-12.762)
C2': (11.676,38.243,-10.771)
C2: (9.897,33.179,-8.693)
N1: (10.172,32.989,-7.392)
N3: (10.320,34.160,-9.512)
N6: (11.292,33.661,-5.505)
N7: (12.376,35.977,-7.221)
N9: (11.798,36.138,-9.390)
O5': (14.286,36.042,-13.857)
O3': (11.102,39.130,-12.965)
C4: (4.379,42.474,-15.809)
N3: (4.454,43.584,-14.979)
OP1: (11.218,38.283,-15.333)
OP2: (12.488,40.389,-14.595)
C2: (5.578,44.094,-14.370)
C1': (8.057,43.867,-13.964)
C3': (9.448,42.905,-12.186)
O5': (9.965,40.368,-14.820)
O4': (9.195,43.212,-14.530)
C5': (9.292,40.945,-13.787)
P: (11.283,39.518,-14.514)
C4': (9.809,42.339,-13.556)
C2': (8.092,43.629,-12.447)
O2': (7.935,44.856,-11.763)
N1: (6.754,43.384,-14.610)
O4: (3.295,42.143,-16.294)
O2: (5.520,45.091,-13.667)
C6: (6.747,42.260,-15.433)
C5: (5.630,41.789,-16.019)
O3': (10.525,43.748,-11.631)
Image (generated by PyMOL):
PyMOL image
show in jmol