Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1R3E:E4:E5
Extra
PDB:
ATOM 1 O3' U A 3 40.403 -34.850 14.642 1.00 80.01 O
ATOM 2 P G A 4 39.818 -36.274 14.190 1.00 77.42 P
ATOM 3 OP1 G A 4 40.155 -37.244 15.264 1.00 76.60 O
ATOM 4 OP2 G A 4 40.259 -36.538 12.794 1.00 62.79 O
ATOM 5 O5' G A 4 38.244 -36.029 14.191 1.00 71.86 O
ATOM 6 C5' G A 4 37.579 -35.571 15.366 1.00 73.20 C
ATOM 7 C4' G A 4 36.192 -35.094 15.019 1.00 74.50 C
ATOM 8 O4' G A 4 36.338 -33.991 14.102 1.00 68.74 O
ATOM 9 C3' G A 4 35.339 -36.104 14.260 1.00 79.53 C
ATOM 10 O3' G A 4 34.488 -36.891 15.109 1.00 96.55 O
ATOM 11 C2' G A 4 34.409 -35.228 13.420 1.00 72.73 C
ATOM 12 O2' G A 4 33.177 -35.000 14.069 1.00 76.49 O
ATOM 13 C1' G A 4 35.188 -33.914 13.300 1.00 68.27 C
ATOM 14 N9 G A 4 35.557 -33.483 11.958 1.00 54.38 N
ATOM 15 C8 G A 4 36.697 -33.775 11.250 1.00 52.35 C
ATOM 16 N7 G A 4 36.722 -33.211 10.071 1.00 52.34 N
ATOM 17 C5 G A 4 35.524 -32.512 10.000 1.00 44.81 C
ATOM 18 C6 G A 4 34.983 -31.711 8.963 1.00 45.50 C
ATOM 19 O6 G A 4 35.470 -31.448 7.853 1.00 45.22 O
ATOM 20 N1 G A 4 33.744 -31.188 9.315 1.00 40.67 N
ATOM 21 C2 G A 4 33.109 -31.402 10.515 1.00 44.93 C
ATOM 22 N2 G A 4 31.923 -30.791 10.686 1.00 43.01 N
ATOM 23 N3 G A 4 33.599 -32.153 11.482 1.00 44.08 N
ATOM 24 C4 G A 4 34.798 -32.671 11.158 1.00 48.81 C
ATOM 25 P U A 5 34.891 -37.193 16.643 1.00109.49 P
ATOM 26 OP1 U A 5 34.119 -36.235 17.476 1.00105.96 O
ATOM 27 OP2 U A 5 36.362 -37.297 16.814 1.00109.69 O
ATOM 28 O5' U A 5 34.288 -38.642 16.920 1.00117.61 O
TER
ATOM 1 O3' G B 4 34.488 -36.891 15.109 1.00 96.55 O
ATOM 2 P U B 5 34.891 -37.193 16.643 1.00109.49 P
ATOM 3 OP1 U B 5 34.119 -36.235 17.476 1.00105.96 O
ATOM 4 OP2 U B 5 36.362 -37.297 16.814 1.00109.69 O
ATOM 5 O5' U B 5 34.288 -38.642 16.920 1.00117.61 O
ATOM 6 C5' U B 5 34.347 -39.666 15.927 1.00131.84 C
ATOM 7 C4' U B 5 33.930 -40.989 16.521 1.00139.97 C
ATOM 8 O4' U B 5 32.866 -40.757 17.473 1.00143.97 O
ATOM 9 C3' U B 5 33.400 -42.017 15.528 1.00145.65 C
ATOM 10 O3' U B 5 34.487 -42.794 15.015 1.00151.13 O
ATOM 11 C2' U B 5 32.397 -42.806 16.365 1.00147.27 C
ATOM 12 O2' U B 5 32.990 -43.819 17.149 1.00148.42 O
ATOM 13 C1' U B 5 31.851 -41.722 17.301 1.00147.96 C
ATOM 14 N1 U B 5 30.648 -41.012 16.844 1.00150.17 N
ATOM 15 C2 U B 5 29.466 -41.721 16.736 1.00151.99 C
ATOM 16 O2 U B 5 29.384 -42.916 16.970 1.00152.55 O
ATOM 17 N3 U B 5 28.383 -40.975 16.338 1.00152.61 N
ATOM 18 C4 U B 5 28.367 -39.625 16.039 1.00152.16 C
ATOM 19 O4 U B 5 27.305 -39.087 15.718 1.00153.14 O
ATOM 20 C5 U B 5 29.633 -38.971 16.162 1.00151.14 C
ATOM 21 C6 U B 5 30.701 -39.668 16.550 1.00149.57 C
ATOM 22 P U B 6 34.229 -44.260 14.387 1.00157.18 P
ATOM 23 OP1 U B 6 33.772 -45.164 15.471 1.00158.68 O
ATOM 24 OP2 U B 6 35.435 -44.622 13.598 1.00157.46 O
ATOM 25 O5' U B 6 33.023 -44.089 13.360 1.00155.88 O
TER
ATOM 2 P G A 4 39.818 -36.274 14.190 1.00 77.42 P
ATOM 3 OP1 G A 4 40.155 -37.244 15.264 1.00 76.60 O
ATOM 4 OP2 G A 4 40.259 -36.538 12.794 1.00 62.79 O
ATOM 5 O5' G A 4 38.244 -36.029 14.191 1.00 71.86 O
ATOM 6 C5' G A 4 37.579 -35.571 15.366 1.00 73.20 C
ATOM 7 C4' G A 4 36.192 -35.094 15.019 1.00 74.50 C
ATOM 8 O4' G A 4 36.338 -33.991 14.102 1.00 68.74 O
ATOM 9 C3' G A 4 35.339 -36.104 14.260 1.00 79.53 C
ATOM 10 O3' G A 4 34.488 -36.891 15.109 1.00 96.55 O
ATOM 11 C2' G A 4 34.409 -35.228 13.420 1.00 72.73 C
ATOM 12 O2' G A 4 33.177 -35.000 14.069 1.00 76.49 O
ATOM 13 C1' G A 4 35.188 -33.914 13.300 1.00 68.27 C
ATOM 14 N9 G A 4 35.557 -33.483 11.958 1.00 54.38 N
ATOM 15 C8 G A 4 36.697 -33.775 11.250 1.00 52.35 C
ATOM 16 N7 G A 4 36.722 -33.211 10.071 1.00 52.34 N
ATOM 17 C5 G A 4 35.524 -32.512 10.000 1.00 44.81 C
ATOM 18 C6 G A 4 34.983 -31.711 8.963 1.00 45.50 C
ATOM 19 O6 G A 4 35.470 -31.448 7.853 1.00 45.22 O
ATOM 20 N1 G A 4 33.744 -31.188 9.315 1.00 40.67 N
ATOM 21 C2 G A 4 33.109 -31.402 10.515 1.00 44.93 C
ATOM 22 N2 G A 4 31.923 -30.791 10.686 1.00 43.01 N
ATOM 23 N3 G A 4 33.599 -32.153 11.482 1.00 44.08 N
ATOM 24 C4 G A 4 34.798 -32.671 11.158 1.00 48.81 C
ATOM 25 P U A 5 34.891 -37.193 16.643 1.00109.49 P
ATOM 26 OP1 U A 5 34.119 -36.235 17.476 1.00105.96 O
ATOM 27 OP2 U A 5 36.362 -37.297 16.814 1.00109.69 O
ATOM 28 O5' U A 5 34.288 -38.642 16.920 1.00117.61 O
TER
ATOM 1 O3' G B 4 34.488 -36.891 15.109 1.00 96.55 O
ATOM 2 P U B 5 34.891 -37.193 16.643 1.00109.49 P
ATOM 3 OP1 U B 5 34.119 -36.235 17.476 1.00105.96 O
ATOM 4 OP2 U B 5 36.362 -37.297 16.814 1.00109.69 O
ATOM 5 O5' U B 5 34.288 -38.642 16.920 1.00117.61 O
ATOM 6 C5' U B 5 34.347 -39.666 15.927 1.00131.84 C
ATOM 7 C4' U B 5 33.930 -40.989 16.521 1.00139.97 C
ATOM 8 O4' U B 5 32.866 -40.757 17.473 1.00143.97 O
ATOM 9 C3' U B 5 33.400 -42.017 15.528 1.00145.65 C
ATOM 10 O3' U B 5 34.487 -42.794 15.015 1.00151.13 O
ATOM 11 C2' U B 5 32.397 -42.806 16.365 1.00147.27 C
ATOM 12 O2' U B 5 32.990 -43.819 17.149 1.00148.42 O
ATOM 13 C1' U B 5 31.851 -41.722 17.301 1.00147.96 C
ATOM 14 N1 U B 5 30.648 -41.012 16.844 1.00150.17 N
ATOM 15 C2 U B 5 29.466 -41.721 16.736 1.00151.99 C
ATOM 16 O2 U B 5 29.384 -42.916 16.970 1.00152.55 O
ATOM 17 N3 U B 5 28.383 -40.975 16.338 1.00152.61 N
ATOM 18 C4 U B 5 28.367 -39.625 16.039 1.00152.16 C
ATOM 19 O4 U B 5 27.305 -39.087 15.718 1.00153.14 O
ATOM 20 C5 U B 5 29.633 -38.971 16.162 1.00151.14 C
ATOM 21 C6 U B 5 30.701 -39.668 16.550 1.00149.57 C
ATOM 22 P U B 6 34.229 -44.260 14.387 1.00157.18 P
ATOM 23 OP1 U B 6 33.772 -45.164 15.471 1.00158.68 O
ATOM 24 OP2 U B 6 35.435 -44.622 13.598 1.00157.46 O
ATOM 25 O5' U B 6 33.023 -44.089 13.360 1.00155.88 O
TER
Atoms:
OP1: (40.155,-37.244,15.264)
OP2: (40.259,-36.538,12.794)
C3': (35.339,-36.104,14.260)
C1': (35.188,-33.914,13.300)
C5': (37.579,-35.571,15.366)
O6: (35.470,-31.448,7.853)
O4': (36.338,-33.991,14.102)
C8: (36.697,-33.775,11.250)
C2: (33.109,-31.402,10.515)
C6: (34.983,-31.711,8.963)
C5: (35.524,-32.512,10.000)
C4: (34.798,-32.671,11.158)
P: (39.818,-36.274,14.190)
C4': (36.192,-35.094,15.019)
C2': (34.409,-35.228,13.420)
O2': (33.177,-35.000,14.069)
N1: (33.744,-31.188,9.315)
N2: (31.923,-30.791,10.686)
N3: (33.599,-32.153,11.482)
N7: (36.722,-33.211,10.071)
N9: (35.557,-33.483,11.958)
O5': (38.244,-36.029,14.191)
O3': (34.488,-36.891,15.109)
OP2: (40.259,-36.538,12.794)
C3': (35.339,-36.104,14.260)
C1': (35.188,-33.914,13.300)
C5': (37.579,-35.571,15.366)
O6: (35.470,-31.448,7.853)
O4': (36.338,-33.991,14.102)
C8: (36.697,-33.775,11.250)
C2: (33.109,-31.402,10.515)
C6: (34.983,-31.711,8.963)
C5: (35.524,-32.512,10.000)
C4: (34.798,-32.671,11.158)
P: (39.818,-36.274,14.190)
C4': (36.192,-35.094,15.019)
C2': (34.409,-35.228,13.420)
O2': (33.177,-35.000,14.069)
N1: (33.744,-31.188,9.315)
N2: (31.923,-30.791,10.686)
N3: (33.599,-32.153,11.482)
N7: (36.722,-33.211,10.071)
N9: (35.557,-33.483,11.958)
O5': (38.244,-36.029,14.191)
O3': (34.488,-36.891,15.109)
C4: (28.367,-39.625,16.039)
N3: (28.383,-40.975,16.338)
OP1: (34.119,-36.235,17.476)
OP2: (36.362,-37.297,16.814)
C2: (29.466,-41.721,16.736)
C1': (31.851,-41.722,17.301)
C3': (33.400,-42.017,15.528)
O5': (34.288,-38.642,16.920)
O4': (32.866,-40.757,17.473)
C5': (34.347,-39.666,15.927)
P: (34.891,-37.193,16.643)
C4': (33.930,-40.989,16.521)
C2': (32.397,-42.806,16.365)
O2': (32.990,-43.819,17.149)
N1: (30.648,-41.012,16.844)
O4: (27.305,-39.087,15.718)
O2: (29.384,-42.916,16.970)
C6: (30.701,-39.668,16.550)
C5: (29.633,-38.971,16.162)
O3': (34.487,-42.794,15.015)
N3: (28.383,-40.975,16.338)
OP1: (34.119,-36.235,17.476)
OP2: (36.362,-37.297,16.814)
C2: (29.466,-41.721,16.736)
C1': (31.851,-41.722,17.301)
C3': (33.400,-42.017,15.528)
O5': (34.288,-38.642,16.920)
O4': (32.866,-40.757,17.473)
C5': (34.347,-39.666,15.927)
P: (34.891,-37.193,16.643)
C4': (33.930,-40.989,16.521)
C2': (32.397,-42.806,16.365)
O2': (32.990,-43.819,17.149)
N1: (30.648,-41.012,16.844)
O4: (27.305,-39.087,15.718)
O2: (29.384,-42.916,16.970)
C6: (30.701,-39.668,16.550)
C5: (29.633,-38.971,16.162)
O3': (34.487,-42.794,15.015)
Image (generated by PyMOL):