Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1113:1114
Extra
PDB:
ATOM 1 O3' A A 112 46.060 -50.301 144.690 1.00 57.02 O
ATOM 2 P A A 113 46.149 -51.711 145.453 1.00 71.16 P
ATOM 3 OP1 A A 113 45.776 -52.778 144.476 1.00 70.91 O
ATOM 4 OP2 A A 113 45.340 -51.559 146.694 1.00 71.66 O
ATOM 5 O5' A A 113 47.689 -51.833 145.829 1.00 71.52 O
ATOM 6 C5' A A 113 48.237 -51.033 146.868 1.00 71.90 C
ATOM 7 C4' A A 113 48.903 -51.866 147.921 1.00 72.71 C
ATOM 8 O4' A A 113 49.948 -52.659 147.294 1.00 72.69 O
ATOM 9 C3' A A 113 49.593 -51.063 149.040 1.00 73.16 C
ATOM 10 O3' A A 113 49.488 -51.759 150.284 1.00 73.97 O
ATOM 11 C2' A A 113 51.048 -51.094 148.598 1.00 73.10 C
ATOM 12 O2' A A 113 51.990 -50.891 149.638 1.00 73.71 O
ATOM 13 C1' A A 113 51.119 -52.499 148.047 1.00 73.17 C
ATOM 14 N9 A A 113 52.310 -52.805 147.256 1.00 72.98 N
ATOM 15 C8 A A 113 53.479 -52.093 147.293 1.00 72.97 C
ATOM 16 N7 A A 113 54.459 -52.620 146.608 1.00 72.88 N
ATOM 17 C5 A A 113 53.902 -53.810 146.134 1.00 72.87 C
ATOM 18 C6 A A 113 54.423 -54.866 145.343 1.00 72.82 C
ATOM 19 N6 A A 113 55.675 -54.861 144.864 1.00 72.74 N
ATOM 20 N1 A A 113 53.626 -55.915 145.029 1.00 72.84 N
ATOM 21 C2 A A 113 52.377 -55.888 145.487 1.00 72.91 C
ATOM 22 N3 A A 113 51.779 -54.961 146.240 1.00 72.96 N
ATOM 23 C4 A A 113 52.595 -53.940 146.546 1.00 72.95 C
ATOM 24 P U A 114 48.059 -52.074 150.947 1.00 81.73 P
ATOM 25 OP1 U A 114 47.767 -53.510 150.702 1.00 81.92 O
ATOM 26 OP2 U A 114 47.109 -51.037 150.440 1.00 81.11 O
ATOM 27 O5' U A 114 48.330 -51.853 152.497 1.00 82.53 O
TER
ATOM 1 O3' A B 113 49.488 -51.759 150.284 1.00 73.97 O
ATOM 2 P U B 114 48.059 -52.074 150.947 1.00 81.73 P
ATOM 3 OP1 U B 114 47.767 -53.510 150.702 1.00 81.92 O
ATOM 4 OP2 U B 114 47.109 -51.037 150.440 1.00 81.11 O
ATOM 5 O5' U B 114 48.330 -51.853 152.497 1.00 82.53 O
ATOM 6 C5' U B 114 48.765 -50.591 152.985 1.00 82.54 C
ATOM 7 C4' U B 114 49.648 -50.736 154.191 1.00 83.33 C
ATOM 8 O4' U B 114 48.977 -51.556 155.182 1.00 84.00 O
ATOM 9 C3' U B 114 51.004 -51.401 153.931 1.00 83.50 C
ATOM 10 O3' U B 114 52.027 -50.687 154.608 1.00 83.83 O
ATOM 11 C2' U B 114 50.847 -52.773 154.563 1.00 84.17 C
ATOM 12 O2' U B 114 52.042 -53.343 155.026 1.00 84.72 O
ATOM 13 C1' U B 114 49.909 -52.467 155.706 1.00 84.62 C
ATOM 14 N1 U B 114 49.218 -53.658 156.236 1.00 85.14 N
ATOM 15 C2 U B 114 49.380 -53.824 157.577 1.00 85.96 C
ATOM 16 O2 U B 114 49.964 -52.976 158.211 1.00 86.18 O
ATOM 17 N3 U B 114 48.827 -54.950 158.122 1.00 86.50 N
ATOM 18 C4 U B 114 48.153 -55.936 157.428 1.00 86.29 C
ATOM 19 O4 U B 114 47.693 -56.918 158.032 1.00 86.85 O
ATOM 20 C5 U B 114 48.055 -55.707 156.012 1.00 85.42 C
ATOM 21 C6 U B 114 48.597 -54.612 155.474 1.00 84.89 C
ATOM 22 P U B 115 52.839 -49.542 153.839 1.00 75.94 P
ATOM 23 OP1 U B 115 51.912 -48.400 153.658 1.00 75.46 O
ATOM 24 OP2 U B 115 53.456 -50.166 152.642 1.00 75.50 O
ATOM 25 O5' U B 115 53.959 -49.144 154.888 1.00 76.58 O
TER
ATOM 2 P A A 113 46.149 -51.711 145.453 1.00 71.16 P
ATOM 3 OP1 A A 113 45.776 -52.778 144.476 1.00 70.91 O
ATOM 4 OP2 A A 113 45.340 -51.559 146.694 1.00 71.66 O
ATOM 5 O5' A A 113 47.689 -51.833 145.829 1.00 71.52 O
ATOM 6 C5' A A 113 48.237 -51.033 146.868 1.00 71.90 C
ATOM 7 C4' A A 113 48.903 -51.866 147.921 1.00 72.71 C
ATOM 8 O4' A A 113 49.948 -52.659 147.294 1.00 72.69 O
ATOM 9 C3' A A 113 49.593 -51.063 149.040 1.00 73.16 C
ATOM 10 O3' A A 113 49.488 -51.759 150.284 1.00 73.97 O
ATOM 11 C2' A A 113 51.048 -51.094 148.598 1.00 73.10 C
ATOM 12 O2' A A 113 51.990 -50.891 149.638 1.00 73.71 O
ATOM 13 C1' A A 113 51.119 -52.499 148.047 1.00 73.17 C
ATOM 14 N9 A A 113 52.310 -52.805 147.256 1.00 72.98 N
ATOM 15 C8 A A 113 53.479 -52.093 147.293 1.00 72.97 C
ATOM 16 N7 A A 113 54.459 -52.620 146.608 1.00 72.88 N
ATOM 17 C5 A A 113 53.902 -53.810 146.134 1.00 72.87 C
ATOM 18 C6 A A 113 54.423 -54.866 145.343 1.00 72.82 C
ATOM 19 N6 A A 113 55.675 -54.861 144.864 1.00 72.74 N
ATOM 20 N1 A A 113 53.626 -55.915 145.029 1.00 72.84 N
ATOM 21 C2 A A 113 52.377 -55.888 145.487 1.00 72.91 C
ATOM 22 N3 A A 113 51.779 -54.961 146.240 1.00 72.96 N
ATOM 23 C4 A A 113 52.595 -53.940 146.546 1.00 72.95 C
ATOM 24 P U A 114 48.059 -52.074 150.947 1.00 81.73 P
ATOM 25 OP1 U A 114 47.767 -53.510 150.702 1.00 81.92 O
ATOM 26 OP2 U A 114 47.109 -51.037 150.440 1.00 81.11 O
ATOM 27 O5' U A 114 48.330 -51.853 152.497 1.00 82.53 O
TER
ATOM 1 O3' A B 113 49.488 -51.759 150.284 1.00 73.97 O
ATOM 2 P U B 114 48.059 -52.074 150.947 1.00 81.73 P
ATOM 3 OP1 U B 114 47.767 -53.510 150.702 1.00 81.92 O
ATOM 4 OP2 U B 114 47.109 -51.037 150.440 1.00 81.11 O
ATOM 5 O5' U B 114 48.330 -51.853 152.497 1.00 82.53 O
ATOM 6 C5' U B 114 48.765 -50.591 152.985 1.00 82.54 C
ATOM 7 C4' U B 114 49.648 -50.736 154.191 1.00 83.33 C
ATOM 8 O4' U B 114 48.977 -51.556 155.182 1.00 84.00 O
ATOM 9 C3' U B 114 51.004 -51.401 153.931 1.00 83.50 C
ATOM 10 O3' U B 114 52.027 -50.687 154.608 1.00 83.83 O
ATOM 11 C2' U B 114 50.847 -52.773 154.563 1.00 84.17 C
ATOM 12 O2' U B 114 52.042 -53.343 155.026 1.00 84.72 O
ATOM 13 C1' U B 114 49.909 -52.467 155.706 1.00 84.62 C
ATOM 14 N1 U B 114 49.218 -53.658 156.236 1.00 85.14 N
ATOM 15 C2 U B 114 49.380 -53.824 157.577 1.00 85.96 C
ATOM 16 O2 U B 114 49.964 -52.976 158.211 1.00 86.18 O
ATOM 17 N3 U B 114 48.827 -54.950 158.122 1.00 86.50 N
ATOM 18 C4 U B 114 48.153 -55.936 157.428 1.00 86.29 C
ATOM 19 O4 U B 114 47.693 -56.918 158.032 1.00 86.85 O
ATOM 20 C5 U B 114 48.055 -55.707 156.012 1.00 85.42 C
ATOM 21 C6 U B 114 48.597 -54.612 155.474 1.00 84.89 C
ATOM 22 P U B 115 52.839 -49.542 153.839 1.00 75.94 P
ATOM 23 OP1 U B 115 51.912 -48.400 153.658 1.00 75.46 O
ATOM 24 OP2 U B 115 53.456 -50.166 152.642 1.00 75.50 O
ATOM 25 O5' U B 115 53.959 -49.144 154.888 1.00 76.58 O
TER
Atoms:
OP1: (45.776,-52.778,144.476)
OP2: (45.340,-51.559,146.694)
C3': (49.593,-51.063,149.040)
C1': (51.119,-52.499,148.047)
C5': (48.237,-51.033,146.868)
O4': (49.948,-52.659,147.294)
C8: (53.479,-52.093,147.293)
O2': (51.990,-50.891,149.638)
C6: (54.423,-54.866,145.343)
C5: (53.902,-53.810,146.134)
C4: (52.595,-53.940,146.546)
P: (46.149,-51.711,145.453)
C4': (48.903,-51.866,147.921)
C2': (51.048,-51.094,148.598)
C2: (52.377,-55.888,145.487)
N1: (53.626,-55.915,145.029)
N3: (51.779,-54.961,146.240)
N6: (55.675,-54.861,144.864)
N7: (54.459,-52.620,146.608)
N9: (52.310,-52.805,147.256)
O5': (47.689,-51.833,145.829)
O3': (49.488,-51.759,150.284)
OP2: (45.340,-51.559,146.694)
C3': (49.593,-51.063,149.040)
C1': (51.119,-52.499,148.047)
C5': (48.237,-51.033,146.868)
O4': (49.948,-52.659,147.294)
C8: (53.479,-52.093,147.293)
O2': (51.990,-50.891,149.638)
C6: (54.423,-54.866,145.343)
C5: (53.902,-53.810,146.134)
C4: (52.595,-53.940,146.546)
P: (46.149,-51.711,145.453)
C4': (48.903,-51.866,147.921)
C2': (51.048,-51.094,148.598)
C2: (52.377,-55.888,145.487)
N1: (53.626,-55.915,145.029)
N3: (51.779,-54.961,146.240)
N6: (55.675,-54.861,144.864)
N7: (54.459,-52.620,146.608)
N9: (52.310,-52.805,147.256)
O5': (47.689,-51.833,145.829)
O3': (49.488,-51.759,150.284)
C4: (48.153,-55.936,157.428)
N3: (48.827,-54.950,158.122)
OP1: (47.767,-53.510,150.702)
OP2: (47.109,-51.037,150.440)
C2: (49.380,-53.824,157.577)
C1': (49.909,-52.467,155.706)
C3': (51.004,-51.401,153.931)
O5': (48.330,-51.853,152.497)
O4': (48.977,-51.556,155.182)
C5': (48.765,-50.591,152.985)
P: (48.059,-52.074,150.947)
C4': (49.648,-50.736,154.191)
C2': (50.847,-52.773,154.563)
O2': (52.042,-53.343,155.026)
N1: (49.218,-53.658,156.236)
O4: (47.693,-56.918,158.032)
O2: (49.964,-52.976,158.211)
C6: (48.597,-54.612,155.474)
C5: (48.055,-55.707,156.012)
O3': (52.027,-50.687,154.608)
N3: (48.827,-54.950,158.122)
OP1: (47.767,-53.510,150.702)
OP2: (47.109,-51.037,150.440)
C2: (49.380,-53.824,157.577)
C1': (49.909,-52.467,155.706)
C3': (51.004,-51.401,153.931)
O5': (48.330,-51.853,152.497)
O4': (48.977,-51.556,155.182)
C5': (48.765,-50.591,152.985)
P: (48.059,-52.074,150.947)
C4': (49.648,-50.736,154.191)
C2': (50.847,-52.773,154.563)
O2': (52.042,-53.343,155.026)
N1: (49.218,-53.658,156.236)
O4: (47.693,-56.918,158.032)
O2: (49.964,-52.976,158.211)
C6: (48.597,-54.612,155.474)
C5: (48.055,-55.707,156.012)
O3': (52.027,-50.687,154.608)
Image (generated by PyMOL):