Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0306:0307
Extra
PDB:
ATOM 1 O3' A A 305 9.462 142.307 40.415 1.00 55.08 O
ATOM 2 P U A 306 9.715 141.961 38.878 1.00 58.34 P
ATOM 3 OP1 U A 306 10.390 143.123 38.265 1.00 58.36 O
ATOM 4 OP2 U A 306 8.427 141.478 38.321 1.00 59.68 O
ATOM 5 O5' U A 306 10.763 140.760 38.933 1.00 62.61 O
ATOM 6 C5' U A 306 10.350 139.376 38.806 1.00 66.93 C
ATOM 7 C4' U A 306 11.055 138.517 39.838 1.00 69.63 C
ATOM 8 O4' U A 306 12.486 138.763 39.762 1.00 70.95 O
ATOM 9 C3' U A 306 10.681 138.814 41.286 1.00 70.70 C
ATOM 10 O3' U A 306 9.469 138.148 41.711 1.00 69.53 O
ATOM 11 C2' U A 306 11.935 138.471 42.084 1.00 72.85 C
ATOM 12 O2' U A 306 11.989 137.140 42.538 1.00 76.72 O
ATOM 13 C1' U A 306 13.051 138.731 41.062 1.00 73.46 C
ATOM 14 N1 U A 306 13.878 139.934 41.266 1.00 74.43 N
ATOM 15 C2 U A 306 15.246 139.753 41.430 1.00 75.37 C
ATOM 16 O2 U A 306 15.783 138.657 41.412 1.00 75.35 O
ATOM 17 N3 U A 306 15.967 140.905 41.616 1.00 75.43 N
ATOM 18 C4 U A 306 15.483 142.191 41.651 1.00 75.78 C
ATOM 19 O4 U A 306 16.267 143.127 41.822 1.00 76.61 O
ATOM 20 C5 U A 306 14.067 142.299 41.475 1.00 75.54 C
ATOM 21 C6 U A 306 13.331 141.195 41.294 1.00 75.17 C
ATOM 22 P A A 307 9.248 136.552 41.462 1.00 67.61 P
ATOM 23 OP1 A A 307 10.516 135.815 41.287 1.00 66.86 O
ATOM 24 OP2 A A 307 8.208 136.434 40.415 1.00 67.96 O
ATOM 25 O5' A A 307 8.547 136.048 42.798 1.00 65.45 O
TER
ATOM 1 O3' U B 306 9.469 138.148 41.711 1.00 69.53 O
ATOM 2 P A B 307 9.248 136.552 41.462 1.00 67.61 P
ATOM 3 OP1 A B 307 10.516 135.815 41.287 1.00 66.86 O
ATOM 4 OP2 A B 307 8.208 136.434 40.415 1.00 67.96 O
ATOM 5 O5' A B 307 8.547 136.048 42.798 1.00 65.45 O
ATOM 6 C5' A B 307 9.295 135.583 43.933 1.00 61.68 C
ATOM 7 C4' A B 307 8.450 135.708 45.180 1.00 60.93 C
ATOM 8 O4' A B 307 8.312 137.110 45.518 1.00 60.24 O
ATOM 9 C3' A B 307 7.022 135.211 45.034 1.00 61.99 C
ATOM 10 O3' A B 307 6.927 133.807 45.245 1.00 64.92 O
ATOM 11 C2' A B 307 6.270 136.024 46.077 1.00 60.70 C
ATOM 12 O2' A B 307 6.395 135.489 47.375 1.00 61.66 O
ATOM 13 C1' A B 307 7.007 137.364 46.009 1.00 59.79 C
ATOM 14 N9 A B 307 6.393 138.384 45.153 1.00 59.49 N
ATOM 15 C8 A B 307 6.876 138.867 43.960 1.00 58.64 C
ATOM 16 N7 A B 307 6.135 139.808 43.430 1.00 58.94 N
ATOM 17 C5 A B 307 5.087 139.953 44.327 1.00 59.41 C
ATOM 18 C6 A B 307 3.962 140.798 44.337 1.00 59.21 C
ATOM 19 N6 A B 307 3.703 141.703 43.391 1.00 58.73 N
ATOM 20 N1 A B 307 3.104 140.683 45.369 1.00 58.93 N
ATOM 21 C2 A B 307 3.367 139.783 46.323 1.00 60.05 C
ATOM 22 N3 A B 307 4.391 138.939 46.430 1.00 59.91 N
ATOM 23 C4 A B 307 5.226 139.075 45.388 1.00 59.43 C
ATOM 24 P G B 308 5.798 132.961 44.475 1.00 67.28 P
ATOM 25 OP1 G B 308 6.004 131.524 44.785 1.00 67.99 O
ATOM 26 OP2 G B 308 5.749 133.398 43.057 1.00 68.54 O
ATOM 27 O5' G B 308 4.453 133.433 45.174 1.00 67.37 O
TER
ATOM 2 P U A 306 9.715 141.961 38.878 1.00 58.34 P
ATOM 3 OP1 U A 306 10.390 143.123 38.265 1.00 58.36 O
ATOM 4 OP2 U A 306 8.427 141.478 38.321 1.00 59.68 O
ATOM 5 O5' U A 306 10.763 140.760 38.933 1.00 62.61 O
ATOM 6 C5' U A 306 10.350 139.376 38.806 1.00 66.93 C
ATOM 7 C4' U A 306 11.055 138.517 39.838 1.00 69.63 C
ATOM 8 O4' U A 306 12.486 138.763 39.762 1.00 70.95 O
ATOM 9 C3' U A 306 10.681 138.814 41.286 1.00 70.70 C
ATOM 10 O3' U A 306 9.469 138.148 41.711 1.00 69.53 O
ATOM 11 C2' U A 306 11.935 138.471 42.084 1.00 72.85 C
ATOM 12 O2' U A 306 11.989 137.140 42.538 1.00 76.72 O
ATOM 13 C1' U A 306 13.051 138.731 41.062 1.00 73.46 C
ATOM 14 N1 U A 306 13.878 139.934 41.266 1.00 74.43 N
ATOM 15 C2 U A 306 15.246 139.753 41.430 1.00 75.37 C
ATOM 16 O2 U A 306 15.783 138.657 41.412 1.00 75.35 O
ATOM 17 N3 U A 306 15.967 140.905 41.616 1.00 75.43 N
ATOM 18 C4 U A 306 15.483 142.191 41.651 1.00 75.78 C
ATOM 19 O4 U A 306 16.267 143.127 41.822 1.00 76.61 O
ATOM 20 C5 U A 306 14.067 142.299 41.475 1.00 75.54 C
ATOM 21 C6 U A 306 13.331 141.195 41.294 1.00 75.17 C
ATOM 22 P A A 307 9.248 136.552 41.462 1.00 67.61 P
ATOM 23 OP1 A A 307 10.516 135.815 41.287 1.00 66.86 O
ATOM 24 OP2 A A 307 8.208 136.434 40.415 1.00 67.96 O
ATOM 25 O5' A A 307 8.547 136.048 42.798 1.00 65.45 O
TER
ATOM 1 O3' U B 306 9.469 138.148 41.711 1.00 69.53 O
ATOM 2 P A B 307 9.248 136.552 41.462 1.00 67.61 P
ATOM 3 OP1 A B 307 10.516 135.815 41.287 1.00 66.86 O
ATOM 4 OP2 A B 307 8.208 136.434 40.415 1.00 67.96 O
ATOM 5 O5' A B 307 8.547 136.048 42.798 1.00 65.45 O
ATOM 6 C5' A B 307 9.295 135.583 43.933 1.00 61.68 C
ATOM 7 C4' A B 307 8.450 135.708 45.180 1.00 60.93 C
ATOM 8 O4' A B 307 8.312 137.110 45.518 1.00 60.24 O
ATOM 9 C3' A B 307 7.022 135.211 45.034 1.00 61.99 C
ATOM 10 O3' A B 307 6.927 133.807 45.245 1.00 64.92 O
ATOM 11 C2' A B 307 6.270 136.024 46.077 1.00 60.70 C
ATOM 12 O2' A B 307 6.395 135.489 47.375 1.00 61.66 O
ATOM 13 C1' A B 307 7.007 137.364 46.009 1.00 59.79 C
ATOM 14 N9 A B 307 6.393 138.384 45.153 1.00 59.49 N
ATOM 15 C8 A B 307 6.876 138.867 43.960 1.00 58.64 C
ATOM 16 N7 A B 307 6.135 139.808 43.430 1.00 58.94 N
ATOM 17 C5 A B 307 5.087 139.953 44.327 1.00 59.41 C
ATOM 18 C6 A B 307 3.962 140.798 44.337 1.00 59.21 C
ATOM 19 N6 A B 307 3.703 141.703 43.391 1.00 58.73 N
ATOM 20 N1 A B 307 3.104 140.683 45.369 1.00 58.93 N
ATOM 21 C2 A B 307 3.367 139.783 46.323 1.00 60.05 C
ATOM 22 N3 A B 307 4.391 138.939 46.430 1.00 59.91 N
ATOM 23 C4 A B 307 5.226 139.075 45.388 1.00 59.43 C
ATOM 24 P G B 308 5.798 132.961 44.475 1.00 67.28 P
ATOM 25 OP1 G B 308 6.004 131.524 44.785 1.00 67.99 O
ATOM 26 OP2 G B 308 5.749 133.398 43.057 1.00 68.54 O
ATOM 27 O5' G B 308 4.453 133.433 45.174 1.00 67.37 O
TER
Atoms:
C4: (15.483,142.191,41.651)
N3: (15.967,140.905,41.616)
OP1: (10.390,143.123,38.265)
OP2: (8.427,141.478,38.321)
C2: (15.246,139.753,41.430)
C1': (13.051,138.731,41.062)
C3': (10.681,138.814,41.286)
O5': (10.763,140.760,38.933)
O4': (12.486,138.763,39.762)
C5': (10.350,139.376,38.806)
P: (9.715,141.961,38.878)
C4': (11.055,138.517,39.838)
C2': (11.935,138.471,42.084)
O2': (11.989,137.140,42.538)
N1: (13.878,139.934,41.266)
O4: (16.267,143.127,41.822)
O2: (15.783,138.657,41.412)
C6: (13.331,141.195,41.294)
C5: (14.067,142.299,41.475)
O3': (9.469,138.148,41.711)
N3: (15.967,140.905,41.616)
OP1: (10.390,143.123,38.265)
OP2: (8.427,141.478,38.321)
C2: (15.246,139.753,41.430)
C1': (13.051,138.731,41.062)
C3': (10.681,138.814,41.286)
O5': (10.763,140.760,38.933)
O4': (12.486,138.763,39.762)
C5': (10.350,139.376,38.806)
P: (9.715,141.961,38.878)
C4': (11.055,138.517,39.838)
C2': (11.935,138.471,42.084)
O2': (11.989,137.140,42.538)
N1: (13.878,139.934,41.266)
O4: (16.267,143.127,41.822)
O2: (15.783,138.657,41.412)
C6: (13.331,141.195,41.294)
C5: (14.067,142.299,41.475)
O3': (9.469,138.148,41.711)
OP1: (10.516,135.815,41.287)
OP2: (8.208,136.434,40.415)
C3': (7.022,135.211,45.034)
C1': (7.007,137.364,46.009)
C5': (9.295,135.583,43.933)
O4': (8.312,137.110,45.518)
C8: (6.876,138.867,43.960)
O2': (6.395,135.489,47.375)
C6: (3.962,140.798,44.337)
C5: (5.087,139.953,44.327)
C4: (5.226,139.075,45.388)
P: (9.248,136.552,41.462)
C4': (8.450,135.708,45.180)
C2': (6.270,136.024,46.077)
C2: (3.367,139.783,46.323)
N1: (3.104,140.683,45.369)
N3: (4.391,138.939,46.430)
N6: (3.703,141.703,43.391)
N7: (6.135,139.808,43.430)
N9: (6.393,138.384,45.153)
O5': (8.547,136.048,42.798)
O3': (6.927,133.807,45.245)
OP2: (8.208,136.434,40.415)
C3': (7.022,135.211,45.034)
C1': (7.007,137.364,46.009)
C5': (9.295,135.583,43.933)
O4': (8.312,137.110,45.518)
C8: (6.876,138.867,43.960)
O2': (6.395,135.489,47.375)
C6: (3.962,140.798,44.337)
C5: (5.087,139.953,44.327)
C4: (5.226,139.075,45.388)
P: (9.248,136.552,41.462)
C4': (8.450,135.708,45.180)
C2': (6.270,136.024,46.077)
C2: (3.367,139.783,46.323)
N1: (3.104,140.683,45.369)
N3: (4.391,138.939,46.430)
N6: (3.703,141.703,43.391)
N7: (6.135,139.808,43.430)
N9: (6.393,138.384,45.153)
O5': (8.547,136.048,42.798)
O3': (6.927,133.807,45.245)
Image (generated by PyMOL):