Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0283:0344
Extra
PDB:
ATOM 1 O3' C A 282 40.953 123.898 6.269 1.00 87.61 O
ATOM 2 P C A 283 40.299 124.362 7.658 1.00 90.00 P
ATOM 3 OP1 C A 283 38.909 124.798 7.356 1.00 90.33 O
ATOM 4 OP2 C A 283 41.240 125.309 8.315 1.00 91.02 O
ATOM 5 O5' C A 283 40.246 123.028 8.529 1.00 87.48 O
ATOM 6 C5' C A 283 39.363 121.954 8.176 1.00 85.83 C
ATOM 7 C4' C A 283 39.676 120.729 8.996 1.00 85.19 C
ATOM 8 O4' C A 283 41.056 120.344 8.756 1.00 85.27 O
ATOM 9 C3' C A 283 39.594 120.884 10.509 1.00 84.67 C
ATOM 10 O3' C A 283 38.255 120.783 11.006 1.00 83.13 O
ATOM 11 C2' C A 283 40.487 119.745 10.988 1.00 85.19 C
ATOM 12 O2' C A 283 39.855 118.478 10.964 1.00 83.47 O
ATOM 13 C1' C A 283 41.605 119.782 9.941 1.00 86.32 C
ATOM 14 N1 C A 283 42.767 120.596 10.367 1.00 88.10 N
ATOM 15 C2 C A 283 43.722 120.021 11.234 1.00 88.96 C
ATOM 16 O2 C A 283 43.575 118.838 11.608 1.00 89.42 O
ATOM 17 N3 C A 283 44.777 120.770 11.641 1.00 88.46 N
ATOM 18 C4 C A 283 44.906 122.031 11.220 1.00 87.68 C
ATOM 19 N4 C A 283 45.963 122.727 11.649 1.00 86.63 N
ATOM 20 C5 C A 283 43.958 122.636 10.341 1.00 87.67 C
ATOM 21 C6 C A 283 42.916 121.890 9.941 1.00 87.98 C
ATOM 22 P G A 284 37.823 121.599 12.332 1.00 81.99 P
ATOM 23 OP1 G A 284 36.453 121.158 12.713 1.00 81.40 O
ATOM 24 OP2 G A 284 38.096 123.047 12.122 1.00 81.05 O
ATOM 25 O5' G A 284 38.815 121.064 13.455 1.00 80.52 O
TER
ATOM 1 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 2 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C B 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C B 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C B 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C B 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C B 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C B 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C B 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C B 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C B 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C B 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C B 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C B 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C B 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C B 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C B 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C B 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A B 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A B 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A B 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A B 345 54.807 121.587 13.479 1.00 70.00 O
TER
ATOM 2 P C A 283 40.299 124.362 7.658 1.00 90.00 P
ATOM 3 OP1 C A 283 38.909 124.798 7.356 1.00 90.33 O
ATOM 4 OP2 C A 283 41.240 125.309 8.315 1.00 91.02 O
ATOM 5 O5' C A 283 40.246 123.028 8.529 1.00 87.48 O
ATOM 6 C5' C A 283 39.363 121.954 8.176 1.00 85.83 C
ATOM 7 C4' C A 283 39.676 120.729 8.996 1.00 85.19 C
ATOM 8 O4' C A 283 41.056 120.344 8.756 1.00 85.27 O
ATOM 9 C3' C A 283 39.594 120.884 10.509 1.00 84.67 C
ATOM 10 O3' C A 283 38.255 120.783 11.006 1.00 83.13 O
ATOM 11 C2' C A 283 40.487 119.745 10.988 1.00 85.19 C
ATOM 12 O2' C A 283 39.855 118.478 10.964 1.00 83.47 O
ATOM 13 C1' C A 283 41.605 119.782 9.941 1.00 86.32 C
ATOM 14 N1 C A 283 42.767 120.596 10.367 1.00 88.10 N
ATOM 15 C2 C A 283 43.722 120.021 11.234 1.00 88.96 C
ATOM 16 O2 C A 283 43.575 118.838 11.608 1.00 89.42 O
ATOM 17 N3 C A 283 44.777 120.770 11.641 1.00 88.46 N
ATOM 18 C4 C A 283 44.906 122.031 11.220 1.00 87.68 C
ATOM 19 N4 C A 283 45.963 122.727 11.649 1.00 86.63 N
ATOM 20 C5 C A 283 43.958 122.636 10.341 1.00 87.67 C
ATOM 21 C6 C A 283 42.916 121.890 9.941 1.00 87.98 C
ATOM 22 P G A 284 37.823 121.599 12.332 1.00 81.99 P
ATOM 23 OP1 G A 284 36.453 121.158 12.713 1.00 81.40 O
ATOM 24 OP2 G A 284 38.096 123.047 12.122 1.00 81.05 O
ATOM 25 O5' G A 284 38.815 121.064 13.455 1.00 80.52 O
TER
ATOM 1 O3' C B 343 53.452 126.348 17.903 1.00 63.93 O
ATOM 2 P C B 344 54.266 125.623 16.724 1.00 64.09 P
ATOM 3 OP1 C B 344 55.508 125.051 17.312 1.00 63.87 O
ATOM 4 OP2 C B 344 54.360 126.581 15.604 1.00 65.29 O
ATOM 5 O5' C B 344 53.334 124.411 16.277 1.00 64.38 O
ATOM 6 C5' C B 344 53.139 123.275 17.141 1.00 65.52 C
ATOM 7 C4' C B 344 52.134 122.320 16.542 1.00 65.16 C
ATOM 8 O4' C B 344 50.868 123.000 16.350 1.00 65.12 O
ATOM 9 C3' C B 344 52.493 121.773 15.174 1.00 66.03 C
ATOM 10 O3' C B 344 53.363 120.649 15.324 1.00 67.84 O
ATOM 11 C2' C B 344 51.126 121.411 14.603 1.00 66.18 C
ATOM 12 O2' C B 344 50.631 120.184 15.095 1.00 66.91 O
ATOM 13 C1' C B 344 50.253 122.538 15.163 1.00 66.23 C
ATOM 14 N1 C B 344 50.077 123.687 14.258 1.00 67.46 N
ATOM 15 C2 C B 344 48.986 123.700 13.372 1.00 68.12 C
ATOM 16 O2 C B 344 48.198 122.738 13.360 1.00 68.67 O
ATOM 17 N3 C B 344 48.819 124.763 12.552 1.00 68.45 N
ATOM 18 C4 C B 344 49.682 125.783 12.595 1.00 68.59 C
ATOM 19 N4 C B 344 49.472 126.819 11.777 1.00 69.26 N
ATOM 20 C5 C B 344 50.798 125.791 13.478 1.00 68.18 C
ATOM 21 C6 C B 344 50.957 124.734 14.282 1.00 67.83 C
ATOM 22 P A B 345 54.344 120.214 14.123 1.00 68.86 P
ATOM 23 OP1 A B 345 53.533 119.497 13.103 1.00 69.98 O
ATOM 24 OP2 A B 345 55.548 119.560 14.700 1.00 68.54 O
ATOM 25 O5' A B 345 54.807 121.587 13.479 1.00 70.00 O
TER
Atoms:
C2: (43.722,120.021,11.234)
OP1: (38.909,124.798,7.356)
OP2: (41.240,125.309,8.315)
C4: (44.906,122.031,11.220)
O5': (40.246,123.028,8.529)
C3': (39.594,120.884,10.509)
C1': (41.605,119.782,9.941)
O4': (41.056,120.344,8.756)
C5': (39.363,121.954,8.176)
P: (40.299,124.362,7.658)
O2: (43.575,118.838,11.608)
C4': (39.676,120.729,8.996)
C2': (40.487,119.745,10.988)
O2': (39.855,118.478,10.964)
N1: (42.767,120.596,10.367)
N3: (44.777,120.770,11.641)
N4: (45.963,122.727,11.649)
C6: (42.916,121.890,9.941)
C5: (43.958,122.636,10.341)
O3': (38.255,120.783,11.006)
OP1: (38.909,124.798,7.356)
OP2: (41.240,125.309,8.315)
C4: (44.906,122.031,11.220)
O5': (40.246,123.028,8.529)
C3': (39.594,120.884,10.509)
C1': (41.605,119.782,9.941)
O4': (41.056,120.344,8.756)
C5': (39.363,121.954,8.176)
P: (40.299,124.362,7.658)
O2: (43.575,118.838,11.608)
C4': (39.676,120.729,8.996)
C2': (40.487,119.745,10.988)
O2': (39.855,118.478,10.964)
N1: (42.767,120.596,10.367)
N3: (44.777,120.770,11.641)
N4: (45.963,122.727,11.649)
C6: (42.916,121.890,9.941)
C5: (43.958,122.636,10.341)
O3': (38.255,120.783,11.006)
C2: (48.986,123.700,13.372)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
OP1: (55.508,125.051,17.312)
OP2: (54.360,126.581,15.604)
C4: (49.682,125.783,12.595)
O5': (53.334,124.411,16.277)
C3': (52.493,121.773,15.174)
C1': (50.253,122.538,15.163)
O4': (50.868,123.000,16.350)
C5': (53.139,123.275,17.141)
P: (54.266,125.623,16.724)
O2: (48.198,122.738,13.360)
C4': (52.134,122.320,16.542)
C2': (51.126,121.411,14.603)
O2': (50.631,120.184,15.095)
N1: (50.077,123.687,14.258)
N3: (48.819,124.763,12.552)
N4: (49.472,126.819,11.777)
C6: (50.957,124.734,14.282)
C5: (50.798,125.791,13.478)
O3': (53.363,120.649,15.324)
Image (generated by PyMOL):