Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2G:B40:B41
Extra
PDB:
ATOM 1 O3' U A 39 -15.064 -57.745 18.314 1.00 64.53 O
ATOM 2 P U A 40 -14.903 -59.332 18.521 1.00 79.12 P
ATOM 3 OP1 U A 40 -16.232 -59.972 18.367 1.00 74.30 O
ATOM 4 OP2 U A 40 -14.106 -59.450 19.755 1.00 77.40 O
ATOM 5 O5' U A 40 -14.035 -59.835 17.275 1.00 73.96 O
ATOM 6 C5' U A 40 -12.630 -60.050 17.399 1.00 78.47 C
ATOM 7 C4' U A 40 -11.997 -60.137 16.017 1.00 80.05 C
ATOM 8 O4' U A 40 -12.200 -61.471 15.473 1.00 84.34 O
ATOM 9 C3' U A 40 -12.573 -59.151 14.988 1.00 76.17 C
ATOM 10 O3' U A 40 -11.638 -58.765 13.984 1.00 75.09 O
ATOM 11 C2' U A 40 -13.620 -60.003 14.296 1.00 81.05 C
ATOM 12 O2' U A 40 -13.838 -59.557 12.976 1.00 81.37 O
ATOM 13 C1' U A 40 -12.906 -61.351 14.251 1.00 90.06 C
ATOM 14 N1 U A 40 -13.925 -62.424 14.067 1.00 93.33 N
ATOM 15 C2 U A 40 -13.898 -63.232 12.939 1.00 89.02 C
ATOM 16 O2 U A 40 -13.046 -63.173 12.062 1.00 86.86 O
ATOM 17 N3 U A 40 -14.922 -64.148 12.891 1.00 94.66 N
ATOM 18 C4 U A 40 -15.938 -64.332 13.820 1.00100.12 C
ATOM 19 O4 U A 40 -16.786 -65.205 13.638 1.00104.26 O
ATOM 20 C5 U A 40 -15.902 -63.437 14.952 1.00 99.92 C
ATOM 21 C6 U A 40 -14.919 -62.532 15.026 1.00 93.65 C
ATOM 22 P G A 41 -10.801 -57.385 13.988 1.00 74.82 P
ATOM 23 OP1 G A 41 -10.070 -57.358 12.693 1.00 61.15 O
ATOM 24 OP2 G A 41 -10.017 -57.282 15.240 1.00 74.05 O
ATOM 25 O5' G A 41 -11.920 -56.224 13.986 1.00 65.40 O
TER
ATOM 1 O3' U B 40 -11.638 -58.765 13.984 1.00 75.09 O
ATOM 2 P G B 41 -10.801 -57.385 13.988 1.00 74.82 P
ATOM 3 OP1 G B 41 -10.070 -57.358 12.693 1.00 61.15 O
ATOM 4 OP2 G B 41 -10.017 -57.282 15.240 1.00 74.05 O
ATOM 5 O5' G B 41 -11.920 -56.224 13.986 1.00 65.40 O
ATOM 6 C5' G B 41 -12.614 -55.831 12.792 1.00 53.14 C
ATOM 7 C4' G B 41 -13.192 -54.450 13.051 1.00 55.83 C
ATOM 8 O4' G B 41 -14.106 -54.507 14.168 1.00 54.82 O
ATOM 9 C3' G B 41 -12.200 -53.384 13.523 1.00 48.16 C
ATOM 10 O3' G B 41 -11.483 -52.906 12.384 1.00 38.99 O
ATOM 11 C2' G B 41 -13.172 -52.364 14.132 1.00 51.02 C
ATOM 12 O2' G B 41 -14.074 -51.766 13.217 1.00 47.16 O
ATOM 13 C1' G B 41 -14.037 -53.304 14.936 1.00 50.14 C
ATOM 14 N9 G B 41 -13.527 -53.592 16.275 1.00 50.67 N
ATOM 15 C8 G B 41 -12.761 -54.642 16.686 1.00 49.75 C
ATOM 16 N7 G B 41 -12.462 -54.581 17.951 1.00 47.72 N
ATOM 17 C5 G B 41 -13.071 -53.456 18.403 1.00 46.23 C
ATOM 18 C6 G B 41 -13.099 -52.919 19.684 1.00 47.30 C
ATOM 19 O6 G B 41 -12.538 -53.431 20.663 1.00 44.37 O
ATOM 20 N1 G B 41 -13.838 -51.721 19.724 1.00 42.64 N
ATOM 21 C2 G B 41 -14.469 -51.143 18.646 1.00 45.46 C
ATOM 22 N2 G B 41 -15.152 -49.962 18.781 1.00 42.68 N
ATOM 23 N3 G B 41 -14.430 -51.673 17.434 1.00 48.05 N
ATOM 24 C4 G B 41 -13.735 -52.823 17.396 1.00 47.63 C
ATOM 25 P A B 42 -10.218 -51.972 12.558 1.00 52.71 P
ATOM 26 OP1 A B 42 -9.018 -52.354 11.833 1.00 41.85 O
ATOM 27 OP2 A B 42 -10.203 -51.391 13.931 1.00 53.00 O
ATOM 28 O5' A B 42 -10.737 -50.730 11.711 1.00 51.67 O
TER
ATOM 2 P U A 40 -14.903 -59.332 18.521 1.00 79.12 P
ATOM 3 OP1 U A 40 -16.232 -59.972 18.367 1.00 74.30 O
ATOM 4 OP2 U A 40 -14.106 -59.450 19.755 1.00 77.40 O
ATOM 5 O5' U A 40 -14.035 -59.835 17.275 1.00 73.96 O
ATOM 6 C5' U A 40 -12.630 -60.050 17.399 1.00 78.47 C
ATOM 7 C4' U A 40 -11.997 -60.137 16.017 1.00 80.05 C
ATOM 8 O4' U A 40 -12.200 -61.471 15.473 1.00 84.34 O
ATOM 9 C3' U A 40 -12.573 -59.151 14.988 1.00 76.17 C
ATOM 10 O3' U A 40 -11.638 -58.765 13.984 1.00 75.09 O
ATOM 11 C2' U A 40 -13.620 -60.003 14.296 1.00 81.05 C
ATOM 12 O2' U A 40 -13.838 -59.557 12.976 1.00 81.37 O
ATOM 13 C1' U A 40 -12.906 -61.351 14.251 1.00 90.06 C
ATOM 14 N1 U A 40 -13.925 -62.424 14.067 1.00 93.33 N
ATOM 15 C2 U A 40 -13.898 -63.232 12.939 1.00 89.02 C
ATOM 16 O2 U A 40 -13.046 -63.173 12.062 1.00 86.86 O
ATOM 17 N3 U A 40 -14.922 -64.148 12.891 1.00 94.66 N
ATOM 18 C4 U A 40 -15.938 -64.332 13.820 1.00100.12 C
ATOM 19 O4 U A 40 -16.786 -65.205 13.638 1.00104.26 O
ATOM 20 C5 U A 40 -15.902 -63.437 14.952 1.00 99.92 C
ATOM 21 C6 U A 40 -14.919 -62.532 15.026 1.00 93.65 C
ATOM 22 P G A 41 -10.801 -57.385 13.988 1.00 74.82 P
ATOM 23 OP1 G A 41 -10.070 -57.358 12.693 1.00 61.15 O
ATOM 24 OP2 G A 41 -10.017 -57.282 15.240 1.00 74.05 O
ATOM 25 O5' G A 41 -11.920 -56.224 13.986 1.00 65.40 O
TER
ATOM 1 O3' U B 40 -11.638 -58.765 13.984 1.00 75.09 O
ATOM 2 P G B 41 -10.801 -57.385 13.988 1.00 74.82 P
ATOM 3 OP1 G B 41 -10.070 -57.358 12.693 1.00 61.15 O
ATOM 4 OP2 G B 41 -10.017 -57.282 15.240 1.00 74.05 O
ATOM 5 O5' G B 41 -11.920 -56.224 13.986 1.00 65.40 O
ATOM 6 C5' G B 41 -12.614 -55.831 12.792 1.00 53.14 C
ATOM 7 C4' G B 41 -13.192 -54.450 13.051 1.00 55.83 C
ATOM 8 O4' G B 41 -14.106 -54.507 14.168 1.00 54.82 O
ATOM 9 C3' G B 41 -12.200 -53.384 13.523 1.00 48.16 C
ATOM 10 O3' G B 41 -11.483 -52.906 12.384 1.00 38.99 O
ATOM 11 C2' G B 41 -13.172 -52.364 14.132 1.00 51.02 C
ATOM 12 O2' G B 41 -14.074 -51.766 13.217 1.00 47.16 O
ATOM 13 C1' G B 41 -14.037 -53.304 14.936 1.00 50.14 C
ATOM 14 N9 G B 41 -13.527 -53.592 16.275 1.00 50.67 N
ATOM 15 C8 G B 41 -12.761 -54.642 16.686 1.00 49.75 C
ATOM 16 N7 G B 41 -12.462 -54.581 17.951 1.00 47.72 N
ATOM 17 C5 G B 41 -13.071 -53.456 18.403 1.00 46.23 C
ATOM 18 C6 G B 41 -13.099 -52.919 19.684 1.00 47.30 C
ATOM 19 O6 G B 41 -12.538 -53.431 20.663 1.00 44.37 O
ATOM 20 N1 G B 41 -13.838 -51.721 19.724 1.00 42.64 N
ATOM 21 C2 G B 41 -14.469 -51.143 18.646 1.00 45.46 C
ATOM 22 N2 G B 41 -15.152 -49.962 18.781 1.00 42.68 N
ATOM 23 N3 G B 41 -14.430 -51.673 17.434 1.00 48.05 N
ATOM 24 C4 G B 41 -13.735 -52.823 17.396 1.00 47.63 C
ATOM 25 P A B 42 -10.218 -51.972 12.558 1.00 52.71 P
ATOM 26 OP1 A B 42 -9.018 -52.354 11.833 1.00 41.85 O
ATOM 27 OP2 A B 42 -10.203 -51.391 13.931 1.00 53.00 O
ATOM 28 O5' A B 42 -10.737 -50.730 11.711 1.00 51.67 O
TER
Atoms:
C4: (-15.938,-64.332,13.820)
N3: (-14.922,-64.148,12.891)
OP1: (-16.232,-59.972,18.367)
OP2: (-14.106,-59.450,19.755)
C2: (-13.898,-63.232,12.939)
C1': (-12.906,-61.351,14.251)
C3': (-12.573,-59.151,14.988)
O5': (-14.035,-59.835,17.275)
O4': (-12.200,-61.471,15.473)
C5': (-12.630,-60.050,17.399)
P: (-14.903,-59.332,18.521)
C4': (-11.997,-60.137,16.017)
C2': (-13.620,-60.003,14.296)
O2': (-13.838,-59.557,12.976)
N1: (-13.925,-62.424,14.067)
O4: (-16.786,-65.205,13.638)
O2: (-13.046,-63.173,12.062)
C6: (-14.919,-62.532,15.026)
C5: (-15.902,-63.437,14.952)
O3': (-11.638,-58.765,13.984)
N3: (-14.922,-64.148,12.891)
OP1: (-16.232,-59.972,18.367)
OP2: (-14.106,-59.450,19.755)
C2: (-13.898,-63.232,12.939)
C1': (-12.906,-61.351,14.251)
C3': (-12.573,-59.151,14.988)
O5': (-14.035,-59.835,17.275)
O4': (-12.200,-61.471,15.473)
C5': (-12.630,-60.050,17.399)
P: (-14.903,-59.332,18.521)
C4': (-11.997,-60.137,16.017)
C2': (-13.620,-60.003,14.296)
O2': (-13.838,-59.557,12.976)
N1: (-13.925,-62.424,14.067)
O4: (-16.786,-65.205,13.638)
O2: (-13.046,-63.173,12.062)
C6: (-14.919,-62.532,15.026)
C5: (-15.902,-63.437,14.952)
O3': (-11.638,-58.765,13.984)
OP1: (-10.070,-57.358,12.693)
OP2: (-10.017,-57.282,15.240)
C3': (-12.200,-53.384,13.523)
C1': (-14.037,-53.304,14.936)
C5': (-12.614,-55.831,12.792)
O6: (-12.538,-53.431,20.663)
O4': (-14.106,-54.507,14.168)
C8: (-12.761,-54.642,16.686)
C2: (-14.469,-51.143,18.646)
C6: (-13.099,-52.919,19.684)
C5: (-13.071,-53.456,18.403)
C4: (-13.735,-52.823,17.396)
P: (-10.801,-57.385,13.988)
C4': (-13.192,-54.450,13.051)
C2': (-13.172,-52.364,14.132)
O2': (-14.074,-51.766,13.217)
N1: (-13.838,-51.721,19.724)
N2: (-15.152,-49.962,18.781)
N3: (-14.430,-51.673,17.434)
N7: (-12.462,-54.581,17.951)
N9: (-13.527,-53.592,16.275)
O5': (-11.920,-56.224,13.986)
O3': (-11.483,-52.906,12.384)
OP2: (-10.017,-57.282,15.240)
C3': (-12.200,-53.384,13.523)
C1': (-14.037,-53.304,14.936)
C5': (-12.614,-55.831,12.792)
O6: (-12.538,-53.431,20.663)
O4': (-14.106,-54.507,14.168)
C8: (-12.761,-54.642,16.686)
C2: (-14.469,-51.143,18.646)
C6: (-13.099,-52.919,19.684)
C5: (-13.071,-53.456,18.403)
C4: (-13.735,-52.823,17.396)
P: (-10.801,-57.385,13.988)
C4': (-13.192,-54.450,13.051)
C2': (-13.172,-52.364,14.132)
O2': (-14.074,-51.766,13.217)
N1: (-13.838,-51.721,19.724)
N2: (-15.152,-49.962,18.781)
N3: (-14.430,-51.673,17.434)
N7: (-12.462,-54.581,17.951)
N9: (-13.527,-53.592,16.275)
O5': (-11.920,-56.224,13.986)
O3': (-11.483,-52.906,12.384)
Image (generated by PyMOL):