ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1745:A1746

Extra

PDB:
ATOM 1 O3' A A1744 57.229 0.625 -29.585 1.00 45.70 O
ATOM 2 P U A1745 57.806 -0.095 -28.284 1.00 62.27 P
ATOM 3 OP1 U A1745 58.413 0.954 -27.438 1.00 74.25 O
ATOM 4 OP2 U A1745 58.662 -1.199 -28.750 1.00 72.81 O
ATOM 5 O5' U A1745 56.510 -0.671 -27.559 1.00 51.08 O
ATOM 6 C5' U A1745 56.572 -1.967 -26.961 1.00 59.23 C
ATOM 7 C4' U A1745 55.479 -2.210 -25.963 1.00 46.18 C
ATOM 8 O4' U A1745 55.269 -1.018 -25.175 1.00 52.35 O
ATOM 9 C3' U A1745 54.134 -2.559 -26.555 1.00 56.15 C
ATOM 10 O3' U A1745 53.473 -3.430 -25.647 1.00 53.41 O
ATOM 11 C2' U A1745 53.446 -1.198 -26.580 1.00 57.83 C
ATOM 12 O2' U A1745 52.038 -1.233 -26.673 1.00 64.25 O
ATOM 13 C1' U A1745 53.916 -0.649 -25.253 1.00 56.04 C
ATOM 14 N1 U A1745 53.823 0.805 -25.131 1.00 62.01 N
ATOM 15 C2 U A1745 52.910 1.224 -24.183 1.00 57.87 C
ATOM 16 O2 U A1745 52.244 0.455 -23.527 1.00 59.67 O
ATOM 17 N3 U A1745 52.794 2.567 -24.037 1.00 56.52 N
ATOM 18 C4 U A1745 53.512 3.494 -24.747 1.00 57.28 C
ATOM 19 O4 U A1745 53.298 4.674 -24.499 1.00 75.38 O
ATOM 20 C5 U A1745 54.450 2.985 -25.710 1.00 53.86 C
ATOM 21 C6 U A1745 54.583 1.669 -25.887 1.00 58.19 C
ATOM 22 P A A1746 53.782 -5.001 -25.707 1.00 63.13 P
ATOM 23 OP1 A A1746 52.595 -5.711 -25.151 1.00 53.59 O
ATOM 24 OP2 A A1746 55.089 -5.205 -25.070 1.00 63.74 O
ATOM 25 O5' A A1746 53.885 -5.276 -27.268 1.00 45.67 O
TER

ATOM 1 O3' U B1745 53.473 -3.430 -25.647 1.00 53.41 O
ATOM 2 P A B1746 53.782 -5.001 -25.707 1.00 63.13 P
ATOM 3 OP1 A B1746 52.595 -5.711 -25.151 1.00 53.59 O
ATOM 4 OP2 A B1746 55.089 -5.205 -25.070 1.00 63.74 O
ATOM 5 O5' A B1746 53.885 -5.276 -27.268 1.00 45.67 O
ATOM 6 C5' A B1746 52.712 -5.469 -28.025 1.00 46.20 C
ATOM 7 C4' A B1746 52.997 -6.198 -29.293 1.00 45.01 C
ATOM 8 O4' A B1746 53.804 -5.363 -30.134 1.00 44.32 O
ATOM 9 C3' A B1746 53.794 -7.479 -29.164 1.00 38.23 C
ATOM 10 O3' A B1746 52.989 -8.595 -28.839 1.00 50.66 O
ATOM 11 C2' A B1746 54.429 -7.590 -30.531 1.00 47.91 C
ATOM 12 O2' A B1746 53.461 -8.022 -31.476 1.00 45.28 O
ATOM 13 C1' A B1746 54.744 -6.136 -30.825 1.00 46.28 C
ATOM 14 N9 A B1746 56.094 -5.717 -30.380 1.00 46.20 N
ATOM 15 C8 A B1746 56.377 -5.051 -29.207 1.00 47.69 C
ATOM 16 N7 A B1746 57.641 -4.728 -29.065 1.00 43.72 N
ATOM 17 C5 A B1746 58.224 -5.172 -30.237 1.00 39.26 C
ATOM 18 C6 A B1746 59.543 -5.118 -30.693 1.00 38.41 C
ATOM 19 N6 A B1746 60.534 -4.567 -30.008 1.00 40.25 N
ATOM 20 N1 A B1746 59.823 -5.653 -31.883 1.00 34.87 N
ATOM 21 C2 A B1746 58.803 -6.190 -32.547 1.00 46.37 C
ATOM 22 N3 A B1746 57.514 -6.309 -32.239 1.00 44.86 N
ATOM 23 C4 A B1746 57.286 -5.761 -31.057 1.00 37.27 C
ATOM 24 P G B1747 53.630 -9.876 -28.106 1.00 49.38 P
ATOM 25 OP1 G B1747 52.526 -10.607 -27.443 1.00 65.57 O
ATOM 26 OP2 G B1747 54.749 -9.381 -27.273 1.00 53.78 O
ATOM 27 O5' G B1747 54.197 -10.740 -29.318 1.00 37.16 O
TER

Atoms:
C4: (53.512,3.494,-24.747)
N3: (52.794,2.567,-24.037)
OP1: (58.413,0.954,-27.438)
OP2: (58.662,-1.199,-28.750)
C2: (52.910,1.224,-24.183)
C1': (53.916,-0.649,-25.253)
C3': (54.134,-2.559,-26.555)
O5': (56.510,-0.671,-27.559)
O4': (55.269,-1.018,-25.175)
C5': (56.572,-1.967,-26.961)
P: (57.806,-0.095,-28.284)
C4': (55.479,-2.210,-25.963)
C2': (53.446,-1.198,-26.580)
O2': (52.038,-1.233,-26.673)
N1: (53.823,0.805,-25.131)
O4: (53.298,4.674,-24.499)
O2: (52.244,0.455,-23.527)
C6: (54.583,1.669,-25.887)
C5: (54.450,2.985,-25.710)
O3': (53.473,-3.430,-25.647)
OP1: (52.595,-5.711,-25.151)
OP2: (55.089,-5.205,-25.070)
C3': (53.794,-7.479,-29.164)
C1': (54.744,-6.136,-30.825)
C5': (52.712,-5.469,-28.025)
O4': (53.804,-5.363,-30.134)
C8: (56.377,-5.051,-29.207)
O2': (53.461,-8.022,-31.476)
C6: (59.543,-5.118,-30.693)
C5: (58.224,-5.172,-30.237)
C4: (57.286,-5.761,-31.057)
P: (53.782,-5.001,-25.707)
C4': (52.997,-6.198,-29.293)
C2': (54.429,-7.590,-30.531)
C2: (58.803,-6.190,-32.547)
N1: (59.823,-5.653,-31.883)
N3: (57.514,-6.309,-32.239)
N6: (60.534,-4.567,-30.008)
N7: (57.641,-4.728,-29.065)
N9: (56.094,-5.717,-30.380)
O5': (53.885,-5.276,-27.268)
O3': (52.989,-8.595,-28.839)
Image (generated by PyMOL):
PyMOL image
show in jmol