Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0551:0582
Extra
PDB:
ATOM 1 O3' A A 550 -15.820 98.479 96.155 1.00 51.38 O
ATOM 2 P C A 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 3 OP1 C A 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 4 OP2 C A 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 5 O5' C A 551 -13.606 97.298 96.090 1.00 52.23 O
ATOM 6 C5' C A 551 -13.602 96.956 94.691 1.00 51.50 C
ATOM 7 C4' C A 551 -12.237 97.186 94.097 1.00 50.68 C
ATOM 8 O4' C A 551 -11.899 98.598 94.168 1.00 51.81 O
ATOM 9 C3' C A 551 -11.091 96.506 94.819 1.00 50.48 C
ATOM 10 O3' C A 551 -10.985 95.151 94.434 1.00 49.39 O
ATOM 11 C2' C A 551 -9.895 97.330 94.366 1.00 51.48 C
ATOM 12 O2' C A 551 -9.444 96.968 93.073 1.00 50.94 O
ATOM 13 C1' C A 551 -10.499 98.739 94.333 1.00 50.93 C
ATOM 14 N1 C A 551 -10.241 99.526 95.553 1.00 53.15 N
ATOM 15 C2 C A 551 -9.100 100.340 95.594 1.00 53.65 C
ATOM 16 O2 C A 551 -8.350 100.375 94.602 1.00 54.38 O
ATOM 17 N3 C A 551 -8.842 101.062 96.707 1.00 52.86 N
ATOM 18 C4 C A 551 -9.666 100.991 97.756 1.00 53.55 C
ATOM 19 N4 C A 551 -9.358 101.710 98.839 1.00 52.50 N
ATOM 20 C5 C A 551 -10.838 100.179 97.742 1.00 52.19 C
ATOM 21 C6 C A 551 -11.085 99.470 96.629 1.00 52.25 C
ATOM 22 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 23 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 24 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 25 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
TER
ATOM 1 O3' A B 581 0.381 106.078 97.902 1.00 45.35 O
ATOM 2 P C B 582 -0.682 107.016 97.146 1.00 44.65 P
ATOM 3 OP1 C B 582 -0.078 108.360 96.976 1.00 44.10 O
ATOM 4 OP2 C B 582 -1.986 106.900 97.829 1.00 46.91 O
ATOM 5 O5' C B 582 -0.835 106.338 95.714 1.00 42.95 O
ATOM 6 C5' C B 582 0.283 106.216 94.835 1.00 40.48 C
ATOM 7 C4' C B 582 -0.070 105.349 93.652 1.00 43.29 C
ATOM 8 O4' C B 582 -0.402 104.007 94.096 1.00 42.59 O
ATOM 9 C3' C B 582 -1.280 105.766 92.830 1.00 43.21 C
ATOM 10 O3' C B 582 -0.952 106.803 91.920 1.00 43.81 O
ATOM 11 C2' C B 582 -1.599 104.471 92.103 1.00 44.53 C
ATOM 12 O2' C B 582 -0.689 104.230 91.050 1.00 42.95 O
ATOM 13 C1' C B 582 -1.365 103.443 93.215 1.00 45.92 C
ATOM 14 N1 C B 582 -2.607 103.159 93.977 1.00 49.44 N
ATOM 15 C2 C B 582 -3.523 102.211 93.472 1.00 49.10 C
ATOM 16 O2 C B 582 -3.265 101.615 92.416 1.00 49.18 O
ATOM 17 N3 C B 582 -4.667 101.976 94.151 1.00 50.93 N
ATOM 18 C4 C B 582 -4.922 102.638 95.279 1.00 50.68 C
ATOM 19 N4 C B 582 -6.078 102.394 95.896 1.00 51.32 N
ATOM 20 C5 C B 582 -4.007 103.588 95.822 1.00 50.17 C
ATOM 21 C6 C B 582 -2.876 103.815 95.148 1.00 48.91 C
ATOM 22 P U B 583 -2.065 107.885 91.496 1.00 45.64 P
ATOM 23 OP1 U B 583 -1.434 108.752 90.467 1.00 44.53 O
ATOM 24 OP2 U B 583 -2.654 108.510 92.712 1.00 41.44 O
ATOM 25 O5' U B 583 -3.195 107.014 90.790 1.00 43.42 O
TER
ATOM 2 P C A 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 3 OP1 C A 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 4 OP2 C A 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 5 O5' C A 551 -13.606 97.298 96.090 1.00 52.23 O
ATOM 6 C5' C A 551 -13.602 96.956 94.691 1.00 51.50 C
ATOM 7 C4' C A 551 -12.237 97.186 94.097 1.00 50.68 C
ATOM 8 O4' C A 551 -11.899 98.598 94.168 1.00 51.81 O
ATOM 9 C3' C A 551 -11.091 96.506 94.819 1.00 50.48 C
ATOM 10 O3' C A 551 -10.985 95.151 94.434 1.00 49.39 O
ATOM 11 C2' C A 551 -9.895 97.330 94.366 1.00 51.48 C
ATOM 12 O2' C A 551 -9.444 96.968 93.073 1.00 50.94 O
ATOM 13 C1' C A 551 -10.499 98.739 94.333 1.00 50.93 C
ATOM 14 N1 C A 551 -10.241 99.526 95.553 1.00 53.15 N
ATOM 15 C2 C A 551 -9.100 100.340 95.594 1.00 53.65 C
ATOM 16 O2 C A 551 -8.350 100.375 94.602 1.00 54.38 O
ATOM 17 N3 C A 551 -8.842 101.062 96.707 1.00 52.86 N
ATOM 18 C4 C A 551 -9.666 100.991 97.756 1.00 53.55 C
ATOM 19 N4 C A 551 -9.358 101.710 98.839 1.00 52.50 N
ATOM 20 C5 C A 551 -10.838 100.179 97.742 1.00 52.19 C
ATOM 21 C6 C A 551 -11.085 99.470 96.629 1.00 52.25 C
ATOM 22 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 23 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 24 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 25 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
TER
ATOM 1 O3' A B 581 0.381 106.078 97.902 1.00 45.35 O
ATOM 2 P C B 582 -0.682 107.016 97.146 1.00 44.65 P
ATOM 3 OP1 C B 582 -0.078 108.360 96.976 1.00 44.10 O
ATOM 4 OP2 C B 582 -1.986 106.900 97.829 1.00 46.91 O
ATOM 5 O5' C B 582 -0.835 106.338 95.714 1.00 42.95 O
ATOM 6 C5' C B 582 0.283 106.216 94.835 1.00 40.48 C
ATOM 7 C4' C B 582 -0.070 105.349 93.652 1.00 43.29 C
ATOM 8 O4' C B 582 -0.402 104.007 94.096 1.00 42.59 O
ATOM 9 C3' C B 582 -1.280 105.766 92.830 1.00 43.21 C
ATOM 10 O3' C B 582 -0.952 106.803 91.920 1.00 43.81 O
ATOM 11 C2' C B 582 -1.599 104.471 92.103 1.00 44.53 C
ATOM 12 O2' C B 582 -0.689 104.230 91.050 1.00 42.95 O
ATOM 13 C1' C B 582 -1.365 103.443 93.215 1.00 45.92 C
ATOM 14 N1 C B 582 -2.607 103.159 93.977 1.00 49.44 N
ATOM 15 C2 C B 582 -3.523 102.211 93.472 1.00 49.10 C
ATOM 16 O2 C B 582 -3.265 101.615 92.416 1.00 49.18 O
ATOM 17 N3 C B 582 -4.667 101.976 94.151 1.00 50.93 N
ATOM 18 C4 C B 582 -4.922 102.638 95.279 1.00 50.68 C
ATOM 19 N4 C B 582 -6.078 102.394 95.896 1.00 51.32 N
ATOM 20 C5 C B 582 -4.007 103.588 95.822 1.00 50.17 C
ATOM 21 C6 C B 582 -2.876 103.815 95.148 1.00 48.91 C
ATOM 22 P U B 583 -2.065 107.885 91.496 1.00 45.64 P
ATOM 23 OP1 U B 583 -1.434 108.752 90.467 1.00 44.53 O
ATOM 24 OP2 U B 583 -2.654 108.510 92.712 1.00 41.44 O
ATOM 25 O5' U B 583 -3.195 107.014 90.790 1.00 43.42 O
TER
Atoms:
C2: (-9.100,100.340,95.594)
OP1: (-15.665,96.040,96.682)
OP2: (-14.702,97.812,98.287)
C4: (-9.666,100.991,97.756)
O5': (-13.606,97.298,96.090)
C3': (-11.091,96.506,94.819)
C1': (-10.499,98.739,94.333)
O4': (-11.899,98.598,94.168)
C5': (-13.602,96.956,94.691)
P: (-14.973,97.343,96.903)
O2: (-8.350,100.375,94.602)
C4': (-12.237,97.186,94.097)
C2': (-9.895,97.330,94.366)
O2': (-9.444,96.968,93.073)
N1: (-10.241,99.526,95.553)
N3: (-8.842,101.062,96.707)
N4: (-9.358,101.710,98.839)
C6: (-11.085,99.470,96.629)
C5: (-10.838,100.179,97.742)
O3': (-10.985,95.151,94.434)
OP1: (-15.665,96.040,96.682)
OP2: (-14.702,97.812,98.287)
C4: (-9.666,100.991,97.756)
O5': (-13.606,97.298,96.090)
C3': (-11.091,96.506,94.819)
C1': (-10.499,98.739,94.333)
O4': (-11.899,98.598,94.168)
C5': (-13.602,96.956,94.691)
P: (-14.973,97.343,96.903)
O2: (-8.350,100.375,94.602)
C4': (-12.237,97.186,94.097)
C2': (-9.895,97.330,94.366)
O2': (-9.444,96.968,93.073)
N1: (-10.241,99.526,95.553)
N3: (-8.842,101.062,96.707)
N4: (-9.358,101.710,98.839)
C6: (-11.085,99.470,96.629)
C5: (-10.838,100.179,97.742)
O3': (-10.985,95.151,94.434)
C2: (-3.523,102.211,93.472)
OP1: (-0.078,108.360,96.976)
OP2: (-1.986,106.900,97.829)
C4: (-4.922,102.638,95.279)
O5': (-0.835,106.338,95.714)
C3': (-1.280,105.766,92.830)
C1': (-1.365,103.443,93.215)
O4': (-0.402,104.007,94.096)
C5': (0.283,106.216,94.835)
P: (-0.682,107.016,97.146)
O2: (-3.265,101.615,92.416)
C4': (-0.070,105.349,93.652)
C2': (-1.599,104.471,92.103)
O2': (-0.689,104.230,91.050)
N1: (-2.607,103.159,93.977)
N3: (-4.667,101.976,94.151)
N4: (-6.078,102.394,95.896)
C6: (-2.876,103.815,95.148)
C5: (-4.007,103.588,95.822)
O3': (-0.952,106.803,91.920)
OP1: (-0.078,108.360,96.976)
OP2: (-1.986,106.900,97.829)
C4: (-4.922,102.638,95.279)
O5': (-0.835,106.338,95.714)
C3': (-1.280,105.766,92.830)
C1': (-1.365,103.443,93.215)
O4': (-0.402,104.007,94.096)
C5': (0.283,106.216,94.835)
P: (-0.682,107.016,97.146)
O2: (-3.265,101.615,92.416)
C4': (-0.070,105.349,93.652)
C2': (-1.599,104.471,92.103)
O2': (-0.689,104.230,91.050)
N1: (-2.607,103.159,93.977)
N3: (-4.667,101.976,94.151)
N4: (-6.078,102.394,95.896)
C6: (-2.876,103.815,95.148)
C5: (-4.007,103.588,95.822)
O3': (-0.952,106.803,91.920)
Image (generated by PyMOL):