ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1061:A1206

Extra

PDB:
ATOM 1 O3' U A1060 18.726 105.399 124.197 1.00 42.75 O
ATOM 2 P C A1061 19.101 105.175 125.722 1.00 42.61 P
ATOM 3 OP1 C A1061 20.502 104.705 125.743 1.00 43.07 O
ATOM 4 OP2 C A1061 18.038 104.317 126.289 1.00 42.90 O
ATOM 5 O5' C A1061 19.027 106.642 126.328 1.00 39.61 O
ATOM 6 C5' C A1061 17.857 107.092 127.031 1.00 40.84 C
ATOM 7 C4' C A1061 18.006 108.542 127.380 1.00 41.06 C
ATOM 8 O4' C A1061 19.127 108.700 128.283 1.00 42.38 O
ATOM 9 C3' C A1061 18.349 109.437 126.204 1.00 42.15 C
ATOM 10 O3' C A1061 17.175 109.824 125.500 1.00 42.44 O
ATOM 11 C2' C A1061 19.018 110.614 126.893 1.00 42.61 C
ATOM 12 O2' C A1061 18.062 111.450 127.512 1.00 43.29 O
ATOM 13 C1' C A1061 19.818 109.901 127.985 1.00 42.20 C
ATOM 14 N1 C A1061 21.208 109.555 127.614 1.00 40.50 N
ATOM 15 C2 C A1061 22.169 110.561 127.577 1.00 40.54 C
ATOM 16 O2 C A1061 21.824 111.728 127.815 1.00 41.36 O
ATOM 17 N3 C A1061 23.454 110.237 127.280 1.00 39.95 N
ATOM 18 C4 C A1061 23.783 108.969 127.023 1.00 39.57 C
ATOM 19 N4 C A1061 25.056 108.696 126.752 1.00 38.98 N
ATOM 20 C5 C A1061 22.821 107.931 127.035 1.00 39.60 C
ATOM 21 C6 C A1061 21.557 108.264 127.326 1.00 39.33 C
ATOM 22 P C A1062 17.285 110.328 123.985 1.00 44.14 P
ATOM 23 OP1 C A1062 15.904 110.548 123.506 1.00 44.89 O
ATOM 24 OP2 C A1062 18.158 109.381 123.260 1.00 45.77 O
ATOM 25 O5' C A1062 18.037 111.728 124.107 1.00 40.43 O
TER

ATOM 1 O3' A B1205 22.454 104.346 133.786 1.00 41.73 O
ATOM 2 P A B1206 21.043 104.521 133.062 1.00 41.02 P
ATOM 3 OP1 A B1206 20.448 105.691 133.743 1.00 41.74 O
ATOM 4 OP2 A B1206 20.259 103.259 132.969 1.00 38.81 O
ATOM 5 O5' A B1206 21.470 104.952 131.589 1.00 38.49 O
ATOM 6 C5' A B1206 21.982 103.992 130.643 1.00 35.94 C
ATOM 7 C4' A B1206 23.276 104.485 130.050 1.00 36.03 C
ATOM 8 O4' A B1206 23.086 105.858 129.620 1.00 36.87 O
ATOM 9 C3' A B1206 24.476 104.507 130.989 1.00 35.66 C
ATOM 10 O3' A B1206 25.631 104.331 130.183 1.00 36.53 O
ATOM 11 C2' A B1206 24.464 105.938 131.509 1.00 36.43 C
ATOM 12 O2' A B1206 25.722 106.426 131.919 1.00 34.62 O
ATOM 13 C1' A B1206 24.030 106.689 130.259 1.00 36.32 C
ATOM 14 N9 A B1206 23.399 107.967 130.574 1.00 37.85 N
ATOM 15 C8 A B1206 22.140 108.214 131.065 1.00 37.27 C
ATOM 16 N7 A B1206 21.881 109.485 131.227 1.00 35.61 N
ATOM 17 C5 A B1206 23.048 110.116 130.822 1.00 35.77 C
ATOM 18 C6 A B1206 23.420 111.466 130.752 1.00 36.15 C
ATOM 19 N6 A B1206 22.618 112.476 131.096 1.00 35.93 N
ATOM 20 N1 A B1206 24.667 111.753 130.308 1.00 35.65 N
ATOM 21 C2 A B1206 25.473 110.744 129.964 1.00 35.37 C
ATOM 22 N3 A B1206 25.235 109.441 129.986 1.00 37.29 N
ATOM 23 C4 A B1206 23.990 109.193 130.427 1.00 36.69 C
ATOM 24 P A B1207 26.116 102.862 129.788 1.00 36.18 P
ATOM 25 OP1 A B1207 26.467 102.889 128.357 1.00 34.80 O
ATOM 26 OP2 A B1207 25.114 101.891 130.278 1.00 36.31 O
ATOM 27 O5' A B1207 27.459 102.685 130.619 1.00 38.60 O
TER

Atoms:
C2: (22.169,110.561,127.577)
OP1: (20.502,104.705,125.743)
OP2: (18.038,104.317,126.289)
C4: (23.783,108.969,127.023)
O5': (19.027,106.642,126.328)
C3': (18.349,109.437,126.204)
C1': (19.818,109.901,127.985)
O4': (19.127,108.700,128.283)
C5': (17.857,107.092,127.031)
P: (19.101,105.175,125.722)
O2: (21.824,111.728,127.815)
C4': (18.006,108.542,127.380)
C2': (19.018,110.614,126.893)
O2': (18.062,111.450,127.512)
N1: (21.208,109.555,127.614)
N3: (23.454,110.237,127.280)
N4: (25.056,108.696,126.752)
C6: (21.557,108.264,127.326)
C5: (22.821,107.931,127.035)
O3': (17.175,109.824,125.500)
OP1: (20.448,105.691,133.743)
OP2: (20.259,103.259,132.969)
C3': (24.476,104.507,130.989)
C1': (24.030,106.689,130.259)
C5': (21.982,103.992,130.643)
O4': (23.086,105.858,129.620)
C8: (22.140,108.214,131.065)
O2': (25.722,106.426,131.919)
C6: (23.420,111.466,130.752)
C5: (23.048,110.116,130.822)
C4: (23.990,109.193,130.427)
P: (21.043,104.521,133.062)
C4': (23.276,104.485,130.050)
C2': (24.464,105.938,131.509)
C2: (25.473,110.744,129.964)
N1: (24.667,111.753,130.308)
N3: (25.235,109.441,129.986)
N6: (22.618,112.476,131.096)
N7: (21.881,109.485,131.227)
N9: (23.399,107.967,130.574)
O5': (21.470,104.952,131.589)
O3': (25.631,104.331,130.183)
Image (generated by PyMOL):
PyMOL image
show in jmol