Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0573:0561
Extra
PDB:
ATOM 1 O3' U A 572 -5.196 81.483 118.214 1.00 86.58 O
ATOM 2 P C A 573 -5.559 82.283 116.878 1.00 85.79 P
ATOM 3 OP1 C A 573 -5.815 81.274 115.817 1.00 85.29 O
ATOM 4 OP2 C A 573 -4.499 83.297 116.686 1.00 86.69 O
ATOM 5 O5' C A 573 -6.918 83.033 117.238 1.00 83.32 O
ATOM 6 C5' C A 573 -8.078 82.287 117.610 1.00 81.73 C
ATOM 7 C4' C A 573 -9.136 83.200 118.168 1.00 81.50 C
ATOM 8 O4' C A 573 -8.609 83.927 119.295 1.00 81.17 O
ATOM 9 C3' C A 573 -9.586 84.336 117.273 1.00 81.48 C
ATOM 10 O3' C A 573 -10.512 83.862 116.314 1.00 82.69 O
ATOM 11 C2' C A 573 -10.286 85.256 118.267 1.00 81.42 C
ATOM 12 O2' C A 573 -11.607 84.837 118.537 1.00 81.07 O
ATOM 13 C1' C A 573 -9.447 85.044 119.532 1.00 81.89 C
ATOM 14 N1 C A 573 -8.622 86.193 119.944 1.00 81.85 N
ATOM 15 C2 C A 573 -9.249 87.302 120.551 1.00 81.75 C
ATOM 16 O2 C A 573 -10.477 87.282 120.733 1.00 82.01 O
ATOM 17 N3 C A 573 -8.500 88.358 120.926 1.00 81.22 N
ATOM 18 C4 C A 573 -7.183 88.343 120.725 1.00 82.36 C
ATOM 19 N4 C A 573 -6.481 89.411 121.107 1.00 83.01 N
ATOM 20 C5 C A 573 -6.521 87.231 120.120 1.00 82.36 C
ATOM 21 C6 C A 573 -7.271 86.190 119.748 1.00 81.41 C
ATOM 22 P C A 574 -10.530 84.493 114.844 1.00 83.59 P
ATOM 23 OP1 C A 574 -11.561 83.761 114.067 1.00 83.54 O
ATOM 24 OP2 C A 574 -9.132 84.517 114.355 1.00 84.65 O
ATOM 25 O5' C A 574 -11.049 85.984 115.068 1.00 81.49 O
TER
ATOM 1 O3' G B 560 -12.950 93.638 127.821 1.00114.66 O
ATOM 2 P A B 561 -12.644 92.178 128.430 1.00113.60 P
ATOM 3 OP1 A B 561 -13.538 91.972 129.591 1.00113.95 O
ATOM 4 OP2 A B 561 -11.178 92.037 128.602 1.00114.25 O
ATOM 5 O5' A B 561 -13.102 91.166 127.293 1.00112.77 O
ATOM 6 C5' A B 561 -14.268 90.353 127.464 1.00112.78 C
ATOM 7 C4' A B 561 -13.937 88.909 127.185 1.00114.22 C
ATOM 8 O4' A B 561 -13.360 88.817 125.852 1.00114.99 O
ATOM 9 C3' A B 561 -12.866 88.271 128.059 1.00114.93 C
ATOM 10 O3' A B 561 -13.320 87.857 129.346 1.00115.61 O
ATOM 11 C2' A B 561 -12.427 87.098 127.193 1.00115.10 C
ATOM 12 O2' A B 561 -13.339 86.015 127.191 1.00115.06 O
ATOM 13 C1' A B 561 -12.407 87.758 125.815 1.00114.90 C
ATOM 14 N9 A B 561 -11.078 88.319 125.562 1.00114.08 N
ATOM 15 C8 A B 561 -10.563 89.528 125.971 1.00113.24 C
ATOM 16 N7 A B 561 -9.305 89.702 125.647 1.00112.63 N
ATOM 17 C5 A B 561 -8.973 88.539 124.963 1.00112.66 C
ATOM 18 C6 A B 561 -7.779 88.099 124.366 1.00112.07 C
ATOM 19 N6 A B 561 -6.648 88.803 124.365 1.00111.79 N
ATOM 20 N1 A B 561 -7.785 86.892 123.764 1.00111.90 N
ATOM 21 C2 A B 561 -8.917 86.181 123.768 1.00112.73 C
ATOM 22 N3 A B 561 -10.099 86.482 124.296 1.00113.08 N
ATOM 23 C4 A B 561 -10.060 87.689 124.888 1.00113.19 C
ATOM 24 P G B 562 -12.243 87.544 130.506 1.00115.28 P
ATOM 25 OP1 G B 562 -13.004 87.147 131.716 1.00115.96 O
ATOM 26 OP2 G B 562 -11.284 88.674 130.584 1.00115.26 O
ATOM 27 O5' G B 562 -11.459 86.261 129.975 1.00113.53 O
TER
ATOM 2 P C A 573 -5.559 82.283 116.878 1.00 85.79 P
ATOM 3 OP1 C A 573 -5.815 81.274 115.817 1.00 85.29 O
ATOM 4 OP2 C A 573 -4.499 83.297 116.686 1.00 86.69 O
ATOM 5 O5' C A 573 -6.918 83.033 117.238 1.00 83.32 O
ATOM 6 C5' C A 573 -8.078 82.287 117.610 1.00 81.73 C
ATOM 7 C4' C A 573 -9.136 83.200 118.168 1.00 81.50 C
ATOM 8 O4' C A 573 -8.609 83.927 119.295 1.00 81.17 O
ATOM 9 C3' C A 573 -9.586 84.336 117.273 1.00 81.48 C
ATOM 10 O3' C A 573 -10.512 83.862 116.314 1.00 82.69 O
ATOM 11 C2' C A 573 -10.286 85.256 118.267 1.00 81.42 C
ATOM 12 O2' C A 573 -11.607 84.837 118.537 1.00 81.07 O
ATOM 13 C1' C A 573 -9.447 85.044 119.532 1.00 81.89 C
ATOM 14 N1 C A 573 -8.622 86.193 119.944 1.00 81.85 N
ATOM 15 C2 C A 573 -9.249 87.302 120.551 1.00 81.75 C
ATOM 16 O2 C A 573 -10.477 87.282 120.733 1.00 82.01 O
ATOM 17 N3 C A 573 -8.500 88.358 120.926 1.00 81.22 N
ATOM 18 C4 C A 573 -7.183 88.343 120.725 1.00 82.36 C
ATOM 19 N4 C A 573 -6.481 89.411 121.107 1.00 83.01 N
ATOM 20 C5 C A 573 -6.521 87.231 120.120 1.00 82.36 C
ATOM 21 C6 C A 573 -7.271 86.190 119.748 1.00 81.41 C
ATOM 22 P C A 574 -10.530 84.493 114.844 1.00 83.59 P
ATOM 23 OP1 C A 574 -11.561 83.761 114.067 1.00 83.54 O
ATOM 24 OP2 C A 574 -9.132 84.517 114.355 1.00 84.65 O
ATOM 25 O5' C A 574 -11.049 85.984 115.068 1.00 81.49 O
TER
ATOM 1 O3' G B 560 -12.950 93.638 127.821 1.00114.66 O
ATOM 2 P A B 561 -12.644 92.178 128.430 1.00113.60 P
ATOM 3 OP1 A B 561 -13.538 91.972 129.591 1.00113.95 O
ATOM 4 OP2 A B 561 -11.178 92.037 128.602 1.00114.25 O
ATOM 5 O5' A B 561 -13.102 91.166 127.293 1.00112.77 O
ATOM 6 C5' A B 561 -14.268 90.353 127.464 1.00112.78 C
ATOM 7 C4' A B 561 -13.937 88.909 127.185 1.00114.22 C
ATOM 8 O4' A B 561 -13.360 88.817 125.852 1.00114.99 O
ATOM 9 C3' A B 561 -12.866 88.271 128.059 1.00114.93 C
ATOM 10 O3' A B 561 -13.320 87.857 129.346 1.00115.61 O
ATOM 11 C2' A B 561 -12.427 87.098 127.193 1.00115.10 C
ATOM 12 O2' A B 561 -13.339 86.015 127.191 1.00115.06 O
ATOM 13 C1' A B 561 -12.407 87.758 125.815 1.00114.90 C
ATOM 14 N9 A B 561 -11.078 88.319 125.562 1.00114.08 N
ATOM 15 C8 A B 561 -10.563 89.528 125.971 1.00113.24 C
ATOM 16 N7 A B 561 -9.305 89.702 125.647 1.00112.63 N
ATOM 17 C5 A B 561 -8.973 88.539 124.963 1.00112.66 C
ATOM 18 C6 A B 561 -7.779 88.099 124.366 1.00112.07 C
ATOM 19 N6 A B 561 -6.648 88.803 124.365 1.00111.79 N
ATOM 20 N1 A B 561 -7.785 86.892 123.764 1.00111.90 N
ATOM 21 C2 A B 561 -8.917 86.181 123.768 1.00112.73 C
ATOM 22 N3 A B 561 -10.099 86.482 124.296 1.00113.08 N
ATOM 23 C4 A B 561 -10.060 87.689 124.888 1.00113.19 C
ATOM 24 P G B 562 -12.243 87.544 130.506 1.00115.28 P
ATOM 25 OP1 G B 562 -13.004 87.147 131.716 1.00115.96 O
ATOM 26 OP2 G B 562 -11.284 88.674 130.584 1.00115.26 O
ATOM 27 O5' G B 562 -11.459 86.261 129.975 1.00113.53 O
TER
Atoms:
C2: (-9.249,87.302,120.551)
OP1: (-5.815,81.274,115.817)
OP2: (-4.499,83.297,116.686)
C4: (-7.183,88.343,120.725)
O5': (-6.918,83.033,117.238)
C3': (-9.586,84.336,117.273)
C1': (-9.447,85.044,119.532)
O4': (-8.609,83.927,119.295)
C5': (-8.078,82.287,117.610)
P: (-5.559,82.283,116.878)
O2: (-10.477,87.282,120.733)
C4': (-9.136,83.200,118.168)
C2': (-10.286,85.256,118.267)
O2': (-11.607,84.837,118.537)
N1: (-8.622,86.193,119.944)
N3: (-8.500,88.358,120.926)
N4: (-6.481,89.411,121.107)
C6: (-7.271,86.190,119.748)
C5: (-6.521,87.231,120.120)
O3': (-10.512,83.862,116.314)
OP1: (-5.815,81.274,115.817)
OP2: (-4.499,83.297,116.686)
C4: (-7.183,88.343,120.725)
O5': (-6.918,83.033,117.238)
C3': (-9.586,84.336,117.273)
C1': (-9.447,85.044,119.532)
O4': (-8.609,83.927,119.295)
C5': (-8.078,82.287,117.610)
P: (-5.559,82.283,116.878)
O2: (-10.477,87.282,120.733)
C4': (-9.136,83.200,118.168)
C2': (-10.286,85.256,118.267)
O2': (-11.607,84.837,118.537)
N1: (-8.622,86.193,119.944)
N3: (-8.500,88.358,120.926)
N4: (-6.481,89.411,121.107)
C6: (-7.271,86.190,119.748)
C5: (-6.521,87.231,120.120)
O3': (-10.512,83.862,116.314)
OP1: (-13.538,91.972,129.591)
OP2: (-11.178,92.037,128.602)
C3': (-12.866,88.271,128.059)
C1': (-12.407,87.758,125.815)
C5': (-14.268,90.353,127.464)
O4': (-13.360,88.817,125.852)
C8: (-10.563,89.528,125.971)
O2': (-13.339,86.015,127.191)
C6: (-7.779,88.099,124.366)
C5: (-8.973,88.539,124.963)
C4: (-10.060,87.689,124.888)
P: (-12.644,92.178,128.430)
C4': (-13.937,88.909,127.185)
C2': (-12.427,87.098,127.193)
C2: (-8.917,86.181,123.768)
N1: (-7.785,86.892,123.764)
N3: (-10.099,86.482,124.296)
N6: (-6.648,88.803,124.365)
N7: (-9.305,89.702,125.647)
N9: (-11.078,88.319,125.562)
O5': (-13.102,91.166,127.293)
O3': (-13.320,87.857,129.346)
OP2: (-11.178,92.037,128.602)
C3': (-12.866,88.271,128.059)
C1': (-12.407,87.758,125.815)
C5': (-14.268,90.353,127.464)
O4': (-13.360,88.817,125.852)
C8: (-10.563,89.528,125.971)
O2': (-13.339,86.015,127.191)
C6: (-7.779,88.099,124.366)
C5: (-8.973,88.539,124.963)
C4: (-10.060,87.689,124.888)
P: (-12.644,92.178,128.430)
C4': (-13.937,88.909,127.185)
C2': (-12.427,87.098,127.193)
C2: (-8.917,86.181,123.768)
N1: (-7.785,86.892,123.764)
N3: (-10.099,86.482,124.296)
N6: (-6.648,88.803,124.365)
N7: (-9.305,89.702,125.647)
N9: (-11.078,88.319,125.562)
O5': (-13.102,91.166,127.293)
O3': (-13.320,87.857,129.346)
Image (generated by PyMOL):