ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3SLM:A22:A23

Extra

PDB:
ATOM 1 O3' A A 21 -14.472 0.284 22.897 1.00 44.92 O
ATOM 2 P U A 22 -15.498 -0.461 21.921 1.00 41.54 P
ATOM 3 OP1 U A 22 -16.843 0.123 22.168 1.00 39.88 O
ATOM 4 OP2 U A 22 -15.300 -1.919 22.122 1.00 38.67 O
ATOM 5 O5' U A 22 -14.975 -0.034 20.482 1.00 33.95 O
ATOM 6 C5' U A 22 -13.744 -0.533 19.982 1.00 37.65 C
ATOM 7 C4' U A 22 -13.100 0.426 19.007 1.00 41.21 C
ATOM 8 O4' U A 22 -14.095 0.894 18.052 1.00 38.26 O
ATOM 9 C3' U A 22 -12.482 1.672 19.630 1.00 36.24 C
ATOM 10 O3' U A 22 -11.293 2.019 18.905 1.00 34.76 O
ATOM 11 C2' U A 22 -13.568 2.738 19.414 1.00 36.89 C
ATOM 12 O2' U A 22 -13.091 4.066 19.364 1.00 39.06 O
ATOM 13 C1' U A 22 -14.167 2.310 18.077 1.00 37.68 C
ATOM 14 N1 U A 22 -15.593 2.697 17.881 1.00 37.81 N
ATOM 15 C2 U A 22 -15.991 3.825 17.151 1.00 38.15 C
ATOM 16 O2 U A 22 -15.233 4.639 16.646 1.00 39.16 O
ATOM 17 N3 U A 22 -17.353 3.990 17.037 1.00 36.32 N
ATOM 18 C4 U A 22 -18.345 3.169 17.553 1.00 36.53 C
ATOM 19 O4 U A 22 -19.540 3.424 17.383 1.00 34.59 O
ATOM 20 C5 U A 22 -17.860 2.039 18.271 1.00 35.20 C
ATOM 21 C6 U A 22 -16.545 1.849 18.386 1.00 39.90 C
ATOM 22 P G A 23 -9.868 1.341 19.282 1.00 42.35 P
ATOM 23 OP1 G A 23 -8.909 1.709 18.216 1.00 29.71 O
ATOM 24 OP2 G A 23 -10.118 -0.106 19.551 1.00 38.00 O
ATOM 25 O5' G A 23 -9.475 2.081 20.636 1.00 42.10 O
TER

ATOM 1 O3' U B 22 -11.293 2.019 18.905 1.00 34.76 O
ATOM 2 P G B 23 -9.868 1.341 19.282 1.00 42.35 P
ATOM 3 OP1 G B 23 -8.909 1.709 18.216 1.00 29.71 O
ATOM 4 OP2 G B 23 -10.118 -0.106 19.551 1.00 38.00 O
ATOM 5 O5' G B 23 -9.475 2.081 20.636 1.00 42.10 O
ATOM 6 C5' G B 23 -9.523 3.499 20.732 1.00 34.87 C
ATOM 7 C4' G B 23 -9.366 3.960 22.157 1.00 33.03 C
ATOM 8 O4' G B 23 -10.409 3.376 22.978 1.00 27.70 O
ATOM 9 C3' G B 23 -8.078 3.543 22.862 1.00 32.06 C
ATOM 10 O3' G B 23 -6.973 4.360 22.527 1.00 27.47 O
ATOM 11 C2' G B 23 -8.483 3.638 24.322 1.00 32.81 C
ATOM 12 O2' G B 23 -8.569 5.000 24.727 1.00 30.13 O
ATOM 13 C1' G B 23 -9.896 3.067 24.257 1.00 28.28 C
ATOM 14 N9 G B 23 -9.904 1.600 24.410 1.00 27.13 N
ATOM 15 C8 G B 23 -10.045 0.691 23.388 1.00 26.38 C
ATOM 16 N7 G B 23 -10.025 -0.545 23.796 1.00 24.58 N
ATOM 17 C5 G B 23 -9.854 -0.452 25.161 1.00 25.84 C
ATOM 18 C6 G B 23 -9.765 -1.476 26.135 1.00 32.07 C
ATOM 19 O6 G B 23 -9.820 -2.704 25.977 1.00 39.05 O
ATOM 20 N1 G B 23 -9.600 -0.952 27.415 1.00 31.61 N
ATOM 21 C2 G B 23 -9.536 0.387 27.716 1.00 30.37 C
ATOM 22 N2 G B 23 -9.386 0.676 29.022 1.00 29.30 N
ATOM 23 N3 G B 23 -9.620 1.351 26.805 1.00 26.64 N
ATOM 24 C4 G B 23 -9.781 0.865 25.562 1.00 25.49 C
ATOM 25 P G B 24 -5.490 3.755 22.469 1.00 31.58 P
ATOM 26 OP1 G B 24 -4.580 4.890 22.195 1.00 35.46 O
ATOM 27 OP2 G B 24 -5.510 2.614 21.523 1.00 34.82 O
ATOM 28 O5' G B 24 -5.264 3.223 23.944 1.00 34.49 O
TER

Atoms:
C4: (-18.345,3.169,17.553)
N3: (-17.353,3.990,17.037)
OP1: (-16.843,0.123,22.168)
OP2: (-15.300,-1.919,22.122)
C2: (-15.991,3.825,17.151)
C1': (-14.167,2.310,18.077)
C3': (-12.482,1.672,19.630)
O5': (-14.975,-0.034,20.482)
O4': (-14.095,0.894,18.052)
C5': (-13.744,-0.533,19.982)
P: (-15.498,-0.461,21.921)
C4': (-13.100,0.426,19.007)
C2': (-13.568,2.738,19.414)
O2': (-13.091,4.066,19.364)
N1: (-15.593,2.697,17.881)
O4: (-19.540,3.424,17.383)
O2: (-15.233,4.639,16.646)
C6: (-16.545,1.849,18.386)
C5: (-17.860,2.039,18.271)
O3': (-11.293,2.019,18.905)
OP1: (-8.909,1.709,18.216)
OP2: (-10.118,-0.106,19.551)
C3': (-8.078,3.543,22.862)
C1': (-9.896,3.067,24.257)
C5': (-9.523,3.499,20.732)
O6: (-9.820,-2.704,25.977)
O4': (-10.409,3.376,22.978)
C8: (-10.045,0.691,23.388)
C2: (-9.536,0.387,27.716)
C6: (-9.765,-1.476,26.135)
C5: (-9.854,-0.452,25.161)
C4: (-9.781,0.865,25.562)
P: (-9.868,1.341,19.282)
C4': (-9.366,3.960,22.157)
C2': (-8.483,3.638,24.322)
O2': (-8.569,5.000,24.727)
N1: (-9.600,-0.952,27.415)
N2: (-9.386,0.676,29.022)
N3: (-9.620,1.351,26.805)
N7: (-10.025,-0.545,23.796)
N9: (-9.904,1.600,24.410)
O5': (-9.475,2.081,20.636)
O3': (-6.973,4.360,22.527)
Image (generated by PyMOL):
PyMOL image
show in jmol